Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_000621 Daucus carota HOM05D032849 ORTHO05D177470 1.3e-48 196.1 98 100.0
DCAR_017918 Daucus carota HOM05D032849 ORTHO05D176385 7.4e-44 180.3 98 92.9
DCAR_026726 Daucus carota HOM05D000325 ORTHO05D002981 2.2e-11 72.4 45 75.6
Dinv04483 Davidia involucrata HOM05D000325 ORTHO05D002981 5.0e-08 61.2 43 65.1
Rhsim09G0109900 Rhododendron simsii HOM05D000325 ORTHO05D002981 5.0e-08 61.2 43 62.8
DCAR_023668 Daucus carota HOM05D000325 ORTHO05D002981 1.1e-07 60.1 45 57.8
Sopen05g005360 Solanum pennellii HOM05D000325 ORTHO05D002981 1.1e-07 60.1 45 60.0
PGSC0003DMG400012974 Solanum tuberosum HOM05D000325 ORTHO05D002981 1.1e-07 60.1 45 60.0
CSS0018164 Camellia sinensis var. sinensis HOM05D000325 ORTHO05D002981 1.5e-07 59.7 43 62.8
CSS0022755 Camellia sinensis var. sinensis HOM05D000325 ORTHO05D002981 1.5e-07 59.7 43 62.8
CAN.G656.27 Capsicum annuum HOM05D000325 ORTHO05D002981 1.9e-07 59.3 45 57.8
Gohir.A03G097101 Gossypium hirsutum HOM05D000325 ORTHO05D002981 1.9e-07 59.3 43 60.5
Gohir.D02G115600 Gossypium hirsutum HOM05D000325 ORTHO05D002981 1.9e-07 59.3 43 60.5
Gorai.005G138400 Gossypium raimondii HOM05D000325 ORTHO05D002981 1.9e-07 59.3 43 60.5
Solyc05g009550.3 Solanum lycopersicum HOM05D000325 ORTHO05D002981 1.9e-07 59.3 45 60.0
MSTRG.13516 Avicennia marina HOM05D000325 ORTHO05D002981 2.5e-07 58.9 52 53.8
Nn3g17800 Nelumbo nucifera HOM05D000325 ORTHO05D002981 2.5e-07 58.9 45 57.8
MSTRG.2250 Avicennia marina HOM05D000325 ORTHO05D002981 3.2e-07 58.5 45 60.0
Actinidia16639 Actinidia chinensis HOM05D000325 ORTHO05D002981 4.2e-07 58.2 43 62.8
CSS0045898 Camellia sinensis var. sinensis HOM05D000325 ORTHO05D002981 4.2e-07 58.2 58 48.3
Hund25083 Selenicereus undatus HOM05D000325 ORTHO05D002981 4.2e-07 58.2 45 57.8
SalBow8G3679 Salvia bowleyana HOM05D000325 ORTHO05D002981 5.5e-07 57.8 45 57.8
Actinidia14872 Actinidia chinensis HOM05D000325 ORTHO05D002981 7.2e-07 57.4 43 60.5
DCAR_022754 Daucus carota HOM05D032849 ORTHO05D175439 7.2e-07 57.4 33 90.9
Manes.14G100200 Manihot esculenta HOM05D000325 ORTHO05D002981 7.2e-07 57.4 45 55.6
COL.COLO4_07901 Corchorus olitorius HOM05D000325 ORTHO05D002981 1.2e-06 56.6 43 55.8
Nitab4.5_0003823g0060 Nicotiana tabacum HOM05D000325 ORTHO05D002981 1.2e-06 56.6 45 55.6
GSVIVG01031052001 Vitis vinifera HOM05D000325 ORTHO05D002981 1.2e-06 56.6 46 58.7
Aqoxy3G00329 Aquilegia oxysepala HOM05D000325 ORTHO05D002981 1.6e-06 56.2 45 53.3
Eucgr.G02334 Eucalyptus grandis HOM05D000325 ORTHO05D002981 1.6e-06 56.2 45 53.3
Nitab4.5_0004895g0060 Nicotiana tabacum HOM05D000325 ORTHO05D002981 1.6e-06 56.2 45 55.6
Potri.010G127000 Populus trichocarpa HOM05D000325 ORTHO05D002981 1.6e-06 56.2 43 55.8
vmacro10547 Vaccinium macrocarpon HOM05D000325 ORTHO05D002981 1.6e-06 56.2 43 55.8
Nn4g23803 Nelumbo nucifera HOM05D000325 ORTHO05D002981 2.1e-06 55.8 56 48.2
vmacro01372 Vaccinium macrocarpon HOM05D000325 ORTHO05D002981 2.1e-06 55.8 45 55.6
Atru.chr8.903 Acer truncatum HOM05D000325 ORTHO05D002981 2.7e-06 55.5 45 55.6
Ciclev10031654m.g Citrus clementina HOM05D000325 ORTHO05D002981 2.7e-06 55.5 43 53.5
Lj6A761T53 Lonicera japonica HOM05D000325 ORTHO05D002981 2.7e-06 55.5 43 58.1
Lj6A763T32 Lonicera japonica HOM05D000325 ORTHO05D002981 2.7e-06 55.5 43 58.1
Sabra17G0094200 Salix brachista HOM05D000325 ORTHO05D002981 2.7e-06 55.5 44 59.1
Ca_11185_v3 Cicer arietinum L. HOM05D000325 ORTHO05D002981 3.6e-06 55.1 43 55.8
Cc11_g10330 Coffea canephora HOM05D000325 ORTHO05D002981 3.6e-06 55.1 43 55.8
Dinv34835 Davidia involucrata HOM05D000325 ORTHO05D002981 3.6e-06 55.1 45 57.8
Duzib251G0337 Durio zibethinus HOM05D000325 ORTHO05D002981 3.6e-06 55.1 43 55.8
Duzib268G1267 Durio zibethinus HOM05D000325 ORTHO05D002981 3.6e-06 55.1 43 53.5
Migut.E00324 Erythranthe guttata HOM05D000325 ORTHO05D002981 3.6e-06 55.1 45 55.6
PGR102G0710 Punica granatum HOM05D000325 ORTHO05D002981 3.6e-06 55.1 45 55.6
Gohir.A13G053800 Gossypium hirsutum HOM05D000325 ORTHO05D002981 4.7e-06 54.7 43 53.5
Gohir.D13G071300 Gossypium hirsutum HOM05D000325 ORTHO05D002981 4.7e-06 54.7 43 53.5
Gorai.013G081600 Gossypium raimondii HOM05D000325 ORTHO05D002981 4.7e-06 54.7 43 53.5
SGA_v2.0_scaffold170G38751 Striga asiatica HOM05D000325 ORTHO05D002981 4.7e-06 54.7 45 55.6
Thecc.02G357600 Theobroma cacao HOM05D000325 ORTHO05D002981 4.7e-06 54.7 43 55.8
CSS0027385 Camellia sinensis var. sinensis HOM05D000325 ORTHO05D002981 6.1e-06 54.3 43 58.1
CSS0047976 Camellia sinensis var. sinensis HOM05D000325 ORTHO05D002981 6.1e-06 54.3 43 58.1
TPR.G26272 Trifolium pratense HOM05D000325 ORTHO05D002981 6.1e-06 54.3 43 53.5
Dinv21109 Davidia involucrata HOM05D000325 ORTHO05D002981 8.0e-06 53.9 43 55.8


User provided reference genes

Program Settings