Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_000523 Daucus carota HOM05D007399 ORTHO05D009341 1.5e-130 469.5 236 100.0
Dinv19187 Davidia involucrata HOM05D007399 ORTHO05D009341 3.3e-37 159.5 185 49.7
GSVIVG01003279001 Vitis vinifera HOM05D007399 ORTHO05D009341 6.8e-35 151.8 180 47.8
Nn1g07919 Nelumbo nucifera HOM05D007399 ORTHO05D009341 3.4e-34 149.4 150 54.0
Lj2A1128G40 Lonicera japonica HOM05D007399 ORTHO05D009341 4.9e-33 145.6 167 47.3
Actinidia09475 Actinidia chinensis HOM05D007399 ORTHO05D009341 8.3e-33 144.8 187 46.5
Haze_24850 Corylus avellana HOM05D007399 ORTHO05D009341 8.3e-33 144.8 205 46.3
Hund05568 Selenicereus undatus HOM05D007399 ORTHO05D009341 1.4e-32 144.1 210 44.8
QL09p052198 Quercus lobata HOM05D007399 ORTHO05D009341 5.4e-32 142.1 181 47.5
HanXRQChr01g0015211 Helianthus annuus HOM05D007399 ORTHO05D009341 7.0e-32 141.7 181 47.5
Ciclev10022115m.g Citrus clementina HOM05D007399 ORTHO05D009341 2.0e-31 140.2 186 41.9
Phvul.010G020400 Phaseolus vulgaris HOM05D007399 ORTHO05D009341 2.0e-31 140.2 181 47.0
Prupe.8G200700 Prunus persica HOM05D007399 ORTHO05D009341 2.0e-31 140.2 178 45.5
VMungo0331G1622 Vigna mungo HOM05D007399 ORTHO05D009341 4.6e-31 139.0 141 53.9
Oeu037382.1 Olea europaea HOM05D007399 ORTHO05D009341 7.8e-31 138.3 191 44.0
ECA248G2789 Erigeron canadensis HOM05D007399 ORTHO05D009341 1.0e-30 137.9 180 48.3
Thecc.01G222700 Theobroma cacao HOM05D007399 ORTHO05D009341 5.0e-30 135.6 185 43.2
QL09p053062 Quercus lobata HOM05D007399 ORTHO05D009341 1.5e-29 134.0 133 54.1
TAR362G0473 Trochodendron aralioides HOM05D007399 ORTHO05D009341 2.5e-29 133.3 180 43.9
PSO357G0666 Papaver somniferum HOM05D007399 ORTHO05D009341 3.3e-29 132.9 192 40.6
Duzib133G1013 Durio zibethinus HOM05D007399 ORTHO05D009341 4.3e-29 132.5 104 60.6
Cpa.g.sc8.134 Carica papaya HOM05D007399 ORTHO05D009341 5.6e-29 132.1 114 57.0
Cc01_g16850 Coffea canephora HOM05D007399 ORTHO05D009341 7.3e-29 131.7 181 43.6
PSO170G3887 Papaver somniferum HOM05D007399 ORTHO05D009341 9.5e-29 131.3 192 40.6
Ah.08g214480 Amaranthus hybridus HOM05D007399 ORTHO05D009341 1.2e-28 131.0 187 42.8
Gohir.D11G145400 Gossypium hirsutum HOM05D007399 ORTHO05D009341 1.6e-28 130.6 192 42.7
Gorai.007G155900 Gossypium raimondii HOM05D007399 ORTHO05D009341 1.6e-28 130.6 193 42.5
Manes.13G046300 Manihot esculenta HOM05D007399 ORTHO05D009341 1.6e-28 130.6 184 40.8
QL09p053453 Quercus lobata HOM05D007399 ORTHO05D009341 1.6e-28 130.6 186 44.1
Glyma.16G101000 Glycine max HOM05D007399 ORTHO05D009341 2.1e-28 130.2 136 52.9
Peaxi162Scf00398g00810 Petunia axillaris HOM05D007399 ORTHO05D009341 2.1e-28 130.2 182 44.0
RcHm_v2.0_Chr6g0284361 Rosa chinensis HOM05D007399 ORTHO05D009341 2.8e-28 129.8 177 44.6
Potri.002G244400 Populus trichocarpa HOM05D007399 ORTHO05D009341 3.6e-28 129.4 143 49.7
CSS0020487 Camellia sinensis var. sinensis HOM05D007399 ORTHO05D009341 4.7e-28 129.0 96 63.5
Sabra02G0185900 Salix brachista HOM05D007399 ORTHO05D009341 4.7e-28 129.0 104 60.6
Lsat_1_v5_gn_5_180581 Lactuca sativa HOM05D007399 ORTHO05D009341 8.0e-28 128.3 161 46.0
Gohir.A11G139200 Gossypium hirsutum HOM05D007399 ORTHO05D009341 1.0e-27 127.9 202 41.1
PGR083G1511 Punica granatum HOM05D007399 ORTHO05D009341 1.0e-27 127.9 183 42.1
Migut.D02494 Erythranthe guttata HOM05D007399 ORTHO05D009341 1.4e-27 127.5 186 43.0
Oeu037384.1 Olea europaea HOM05D007399 ORTHO05D009341 1.4e-27 127.5 96 64.6
PGSC0003DMG401023104 Solanum tuberosum HOM05D007399 ORTHO05D009341 1.4e-27 127.5 197 42.6
CiPaw.03G147600 Carya illinoinensis HOM05D007399 ORTHO05D009341 2.3e-27 126.7 177 44.1
Lalb_Chr12g0209951 Lupinus albus HOM05D007399 ORTHO05D009341 3.1e-27 126.3 180 42.8
Nitab4.5_0000045g0320 Nicotiana tabacum HOM05D007399 ORTHO05D009341 3.1e-27 126.3 104 61.5
Nitab4.5_0000345g0070 Nicotiana tabacum HOM05D007399 ORTHO05D009341 3.1e-27 126.3 184 44.6
Sopen09g023130 Solanum pennellii HOM05D007399 ORTHO05D009341 3.1e-27 126.3 104 61.5
FvH4_2g18740 Fragaria vesca HOM05D007399 ORTHO05D009341 4.0e-27 125.9 179 44.1
CAN.G3.2 Capsicum annuum HOM05D007399 ORTHO05D009341 5.2e-27 125.6 176 47.2
FAN15G3119 Fragaria x ananassa HOM05D007399 ORTHO05D009341 6.8e-27 125.2 172 43.6
TWI18G0746 Tripterygium wilfordii HOM05D007399 ORTHO05D009341 6.8e-27 125.2 192 41.7
ClCG09G008880 Citrullus lanatus HOM05D007399 ORTHO05D009341 8.9e-27 124.8 189 41.3
Solyc09g059950.3 Solanum lycopersicum HOM05D007399 ORTHO05D009341 1.2e-26 124.4 104 60.6
BcaC05g29751 Brassica carinata HOM05D007399 ORTHO05D009341 1.5e-26 124.0 190 38.4
Rhsim01G0254900 Rhododendron simsii HOM05D007399 ORTHO05D009341 2.0e-26 123.6 95 64.2
Lj3g0000647 Lotus japonicus HOM05D007399 ORTHO05D009341 2.6e-26 123.2 160 46.9
AUR62001112 Chenopodium quinoa HOM05D007399 ORTHO05D009341 3.4e-26 122.9 170 45.3
arahy.Tifrunner.gnm1.ann1.5JJB2W Arachis hypogaea HOM05D007399 ORTHO05D009341 4.4e-26 122.5 188 40.4
CsaV3_7G026010 Cucumis sativus L. HOM05D007399 ORTHO05D009341 5.8e-26 122.1 197 42.1
FAN27G2185 Fragaria x ananassa HOM05D007399 ORTHO05D009341 9.8e-26 121.3 179 43.0
Atru.chr6.1505 Acer truncatum HOM05D007399 ORTHO05D009341 1.7e-25 120.6 93 63.4
Cfa002599 Carpinus fangiana HOM05D007399 ORTHO05D009341 1.7e-25 120.6 135 51.1
COL.COLO4_15647 Corchorus olitorius HOM05D007399 ORTHO05D009341 2.9e-25 119.8 181 40.9
FAN24G1833 Fragaria x ananassa HOM05D007399 ORTHO05D009341 6.4e-25 118.6 95 60.0
Medtr8g013040 Medicago truncatula HOM05D007399 ORTHO05D009341 8.3e-25 118.2 180 41.7
C05p60230 Brassica napus HOM05D007399 ORTHO05D009341 1.9e-24 117.1 120 47.5
arahy.Tifrunner.gnm1.ann1.YE6SLX Arachis hypogaea HOM05D007399 ORTHO05D009341 2.4e-24 116.7 114 51.8
EL10Ac7g17870 Beta vulgaris HOM05D007399 ORTHO05D009341 2.4e-24 116.7 96 59.4
BraA05t22833Z Brassica rapa HOM05D007399 ORTHO05D009341 2.4e-24 116.7 120 48.3
CANSAT01G0413 Cannabis sativa HOM05D007399 ORTHO05D009341 2.4e-24 116.7 100 59.0
CANSAT01G1231 Cannabis sativa HOM05D007399 ORTHO05D009341 2.4e-24 116.7 100 59.0
MELO3C021053.2 Cucumis melo HOM05D007399 ORTHO05D009341 2.4e-24 116.7 190 42.1
A05p41060 Brassica napus HOM05D007399 ORTHO05D009341 3.2e-24 116.3 120 47.5
AL3G18400 Arabidopsis lyrata HOM05D007399 ORTHO05D009341 4.1e-24 115.9 186 40.9
BcaC05g29843 Brassica carinata HOM05D007399 ORTHO05D009341 4.1e-24 115.9 120 47.5
BolC5t34673H Brassica oleracea HOM05D007399 ORTHO05D009341 4.1e-24 115.9 120 47.5
Thhalv10022223m.g Eutrema salsugineum HOM05D007399 ORTHO05D009341 4.1e-24 115.9 97 54.6
Carub.0003s0667 Capsella rubella HOM05D007399 ORTHO05D009341 7.0e-24 115.2 200 37.0
MD05G1173200 Malus domestica HOM05D007399 ORTHO05D009341 7.0e-24 115.2 96 57.3
CANSAT01G2134 Cannabis sativa HOM05D007399 ORTHO05D009341 9.2e-24 114.8 100 58.0
Eucgr.H00781 Eucalyptus grandis HOM05D007399 ORTHO05D009341 1.6e-23 114.0 182 37.4
AT3G07150 Arabidopsis thaliana HOM05D007399 ORTHO05D009341 2.0e-23 113.6 183 38.8
SalBow6G3187 Salvia bowleyana HOM05D007399 ORTHO05D009341 4.6e-23 112.5 187 38.0
SalBow6G3685 Salvia bowleyana HOM05D007399 ORTHO05D009341 4.6e-23 112.5 187 38.0
THA.LOC104802666 Tarenaya hassleriana HOM05D007399 ORTHO05D009341 7.8e-23 111.7 204 36.3
CARHR081750 Cardamine hirsuta HOM05D007399 ORTHO05D009341 1.0e-22 111.3 98 52.0
Sed0009642 Sechium edule HOM05D007399 ORTHO05D009341 1.7e-22 110.5 214 36.4
Sc24g0003500 Simmondsia chinensis HOM05D007399 ORTHO05D009341 2.3e-22 110.2 173 42.2
Aa31LG5G17710 Aethionema arabicum HOM05D007399 ORTHO05D009341 3.0e-22 109.8 102 53.9
CANSAT01G2481 Cannabis sativa HOM05D007399 ORTHO05D009341 5.0e-22 109.0 96 58.3
Sp3g06090 Schrenkiella parvula HOM05D007399 ORTHO05D009341 6.6e-22 108.6 97 52.6
TPR.G17137 Trifolium pratense HOM05D007399 ORTHO05D009341 1.1e-21 107.8 177 38.4
CDE06G2632 Ceratophyllum demersum HOM05D007399 ORTHO05D009341 5.6e-21 105.5 126 47.6
SHI28622 Sapria himalayana HOM05D000002 ORTHO05D000001 7.3e-21 105.1 94 54.3
AUR62008936 Chenopodium quinoa HOM05D007399 ORTHO05D009341 9.5e-21 104.8 78 64.1
Psat4g199960 Pisum sativum HOM05D007399 ORTHO05D009341 9.5e-21 104.8 175 37.1
Actinidia23717 Actinidia chinensis HOM05D007399 ORTHO05D009341 8.3e-17 91.7 187 38.5
SEGI_10803 Sequoiadendron giganteum HOM05D007399 ORTHO05D009341 1.1e-16 91.3 161 33.5
Hund20426 Selenicereus undatus HOM05D007399 ORTHO05D009341 1.6e-15 87.4 78 56.4
ATR0609G108 Amborella trichopoda HOM05D007399 ORTHO05D009341 6.6e-14 82.0 104 43.3
HPP92_011779 Vanilla planifolia HOM05D007399 ORTHO05D009341 2.5e-13 80.1 163 30.1
Os01g0918400 Oryza sativa ssp. japonica HOM05D007399 ORTHO05D009341 6.2e-12 75.5 64 48.4
Zm00001eb364650 Zea mays HOM05D007399 ORTHO05D009341 1.3e-09 67.8 64 43.8
Aqoxy5G00011 Aquilegia oxysepala HOM05D007399 ORTHO05D009341 2.2e-09 67.0 193 30.6


User provided reference genes

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