Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_000439 Daucus carota HOM05D006455 ORTHO05D008098 1.5e-217 759.2 378 100.0
Lj1A106T21 Lonicera japonica HOM05D006455 ORTHO05D008098 2.0e-129 466.5 362 62.7
CSS0002127 Camellia sinensis var. sinensis HOM05D006455 ORTHO05D008098 7.6e-129 464.5 345 65.8
TAR362G0985 Trochodendron aralioides HOM05D006455 ORTHO05D008098 4.8e-123 445.3 342 64.3
GSVIVG01001915001 Vitis vinifera HOM05D006455 ORTHO05D008098 6.9e-122 441.4 357 62.5
Cfa012584 Carpinus fangiana HOM05D006455 ORTHO05D008098 3.8e-120 435.6 344 62.2
Migut.D00764 Erythranthe guttata HOM05D006455 ORTHO05D008098 1.1e-119 434.1 345 62.9
Haze_08072 Corylus avellana HOM05D006455 ORTHO05D008098 1.4e-119 433.7 344 61.9
Gorai.007G161800 Gossypium raimondii HOM05D006455 ORTHO05D008098 2.1e-118 429.9 346 60.4
Gohir.A11G144500 Gossypium hirsutum HOM05D006455 ORTHO05D008098 1.3e-117 427.2 346 59.8
Peaxi162Scf00315g00814 Petunia axillaris HOM05D006455 ORTHO05D008098 1.8e-117 426.8 344 58.4
TWI75G0274 Tripterygium wilfordii HOM05D006455 ORTHO05D008098 2.3e-117 426.4 342 60.2
MSTRG.18514 Avicennia marina HOM05D006455 ORTHO05D008098 3.0e-117 426.0 353 61.8
ECA248G0009 Erigeron canadensis HOM05D006455 ORTHO05D008098 6.7e-117 424.9 342 60.5
CiPaw.12G071600 Carya illinoinensis HOM05D006455 ORTHO05D008098 1.5e-116 423.7 340 61.8
Manes.12G057502 Manihot esculenta HOM05D006455 ORTHO05D008098 3.3e-116 422.5 347 59.4
Manes.12G057904 Manihot esculenta HOM05D006455 ORTHO05D008098 5.6e-116 421.8 347 59.4
Nitab4.5_0006514g0010 Nicotiana tabacum HOM05D006455 ORTHO05D008098 5.6e-116 421.8 344 58.7
Nitab4.5_0000077g0170 Nicotiana tabacum HOM05D006455 ORTHO05D008098 8.1e-115 417.9 344 58.4
Lsat_1_v5_gn_5_176300 Lactuca sativa HOM05D006455 ORTHO05D008098 4.0e-114 415.6 344 57.8
QL12p000818 Quercus lobata HOM05D006455 ORTHO05D008098 9.0e-114 414.5 347 61.7
Thecc.01G205700 Theobroma cacao HOM05D006455 ORTHO05D008098 2.0e-113 413.3 346 59.0
Sopen09g013040 Solanum pennellii HOM05D006455 ORTHO05D008098 5.8e-113 411.8 346 57.5
Rhsim13G0055500 Rhododendron simsii HOM05D006455 ORTHO05D008098 9.9e-113 411.0 318 63.5
ClCG10G001240 Citrullus lanatus HOM05D006455 ORTHO05D008098 1.3e-112 410.6 342 59.1
Hund02815 Selenicereus undatus HOM05D006455 ORTHO05D008098 1.3e-112 410.6 339 57.5
Cc04_g10320 Coffea canephora HOM05D006455 ORTHO05D008098 1.7e-112 410.2 344 59.3
SGA_v2.0_scaffold158G37512 Striga asiatica HOM05D006455 ORTHO05D008098 1.7e-112 410.2 361 57.9
Ciclev10014895m.g Citrus clementina HOM05D006455 ORTHO05D008098 2.2e-112 409.8 360 58.1
Cpa.g.sc8.27 Carica papaya HOM05D006455 ORTHO05D008098 6.4e-112 408.3 342 58.8
Manes.12G057700 Manihot esculenta HOM05D006455 ORTHO05D008098 8.4e-112 407.9 347 58.2
Manes.12G057901 Manihot esculenta HOM05D006455 ORTHO05D008098 8.4e-112 407.9 347 58.2
Eucgr.K02350 Eucalyptus grandis HOM05D006455 ORTHO05D008098 1.4e-111 407.1 343 58.9
FAN08G0013 Fragaria x ananassa HOM05D006455 ORTHO05D004776 1.9e-111 406.8 344 60.5
MELO3C013818.2 Cucumis melo HOM05D006455 ORTHO05D008098 2.4e-111 406.4 342 57.3
vmacro02844 Vaccinium macrocarpon HOM05D006455 ORTHO05D008098 3.2e-111 406.0 348 58.6
COL.COLO4_29922 Corchorus olitorius HOM05D006455 ORTHO05D008098 4.2e-111 405.6 346 56.4
CsaV3_3G001300 Cucumis sativus L. HOM05D006455 ORTHO05D008098 4.2e-111 405.6 342 57.9
HanXRQChr01g0013871 Helianthus annuus HOM05D006455 ORTHO05D008098 5.5e-111 405.2 346 58.1
Aqoxy2G04132 Aquilegia oxysepala HOM05D006455 ORTHO05D008098 9.3e-111 404.4 350 58.6
FvH4_5g32260 Fragaria vesca HOM05D006455 ORTHO05D008098 1.2e-110 404.1 345 60.3
AUR62028628 Chenopodium quinoa HOM05D006455 ORTHO05D008098 1.6e-110 403.7 344 56.1
RcHm_v2.0_Chr7g0228451 Rosa chinensis HOM05D006455 ORTHO05D008098 1.6e-110 403.7 344 59.9
Sed0000077 Sechium edule HOM05D006455 ORTHO05D008098 1.6e-110 403.7 341 59.2
HanXRQChr01g0014041 Helianthus annuus HOM05D006455 ORTHO05D008098 2.1e-110 403.3 346 58.1
Prupe.2G049600 Prunus persica HOM05D006455 ORTHO05D008098 4.6e-110 402.1 344 59.3
FAN18G4165 Fragaria x ananassa HOM05D006455 ORTHO05D008098 2.3e-109 399.8 345 59.7
CANSAT21G2240 Cannabis sativa HOM05D006455 ORTHO05D008098 6.7e-109 398.3 343 58.6
FAN13G0315 Fragaria x ananassa HOM05D006455 ORTHO05D008098 6.7e-109 398.3 344 59.9
AUR62008053 Chenopodium quinoa HOM05D006455 ORTHO05D008098 1.5e-108 397.1 344 55.8
Atru.chr6.3495 Acer truncatum HOM05D006455 ORTHO05D008098 3.3e-108 396.0 345 58.6
MD02G1270700 Malus domestica HOM05D006455 ORTHO05D008098 4.3e-108 395.6 344 58.7
Sc05g0001610 Simmondsia chinensis HOM05D006455 ORTHO05D008098 4.3e-108 395.6 346 57.5
PGR044G2428 Punica granatum HOM05D006455 ORTHO05D008098 9.6e-108 394.4 341 58.4
Solyc09g020150.4 Solanum lycopersicum HOM05D006455 ORTHO05D008098 2.8e-107 392.9 346 55.2
AL8G21110 Arabidopsis lyrata HOM05D006455 ORTHO05D008098 2.4e-106 389.8 360 53.3
BcaC06g30805 Brassica carinata HOM05D006455 ORTHO05D008098 1.5e-105 387.1 347 54.8
A06p39230 Brassica napus HOM05D006455 ORTHO05D008098 2.0e-105 386.7 347 54.8
AT5G48340 Arabidopsis thaliana HOM05D006455 ORTHO05D008098 5.8e-105 385.2 346 53.8
CARHR183890 Cardamine hirsuta HOM05D006455 ORTHO05D008098 7.6e-105 384.8 345 54.2
BraA06t26837Z Brassica rapa HOM05D006455 ORTHO05D008098 1.7e-104 383.6 348 54.6
PSO210G7796 Papaver somniferum HOM05D006455 ORTHO05D008098 1.7e-104 383.6 366 52.2
Thhalv10003907m.g Eutrema salsugineum HOM05D006455 ORTHO05D008098 3.8e-104 382.5 346 53.8
Aa31LG5G9090 Aethionema arabicum HOM05D006455 ORTHO05D008098 8.4e-104 381.3 345 53.0
Nn1g09557 Nelumbo nucifera HOM05D006455 ORTHO05D008098 8.4e-104 381.3 340 55.0
Lalb_Chr16g0391751 Lupinus albus HOM05D006455 ORTHO05D008098 1.9e-103 380.2 343 54.8
BcaC06g30808 Brassica carinata HOM05D006455 ORTHO05D008098 4.2e-103 379.0 351 55.6
unitig_0.g222 Utricularia gibba HOM05D006455 ORTHO05D008098 1.2e-102 377.5 342 53.8
C07p39110 Brassica napus HOM05D006455 ORTHO05D008098 2.1e-102 376.7 351 55.6
Sp2g18700 Schrenkiella parvula HOM05D006455 ORTHO05D008098 4.6e-102 375.6 347 52.4
PSO210G0904 Papaver somniferum HOM05D006455 ORTHO05D008098 7.9e-102 374.8 359 51.5
BolC7t44431H Brassica oleracea HOM05D006455 ORTHO05D008098 3.0e-101 372.9 349 53.9
Carub.0008s0792 Capsella rubella HOM05D006455 ORTHO05D008098 6.7e-101 371.7 349 52.7
Os01g0897100 Oryza sativa ssp. japonica HOM05D006455 ORTHO05D008098 2.8e-99 366.3 341 53.4
Potri.014G174300 Populus trichocarpa HOM05D006455 ORTHO05D008098 3.7e-99 365.9 348 55.2
Glyma.16G105200 Glycine max HOM05D006455 ORTHO05D008098 2.4e-98 363.2 343 54.2
arahy.Tifrunner.gnm1.ann1.E0JCGG Arachis hypogaea HOM05D006455 ORTHO05D008098 1.7e-96 357.1 341 52.8
arahy.Tifrunner.gnm1.ann1.U8H9H1 Arachis hypogaea HOM05D006455 ORTHO05D008098 3.8e-96 355.9 341 53.1
ATR0743G062 Amborella trichopoda HOM05D006455 ORTHO05D008098 1.1e-95 354.4 348 50.0
Lj4g0021895 Lotus japonicus HOM05D006455 ORTHO05D008098 1.2e-94 350.9 343 53.9
Phvul.003G279900 Phaseolus vulgaris HOM05D006455 ORTHO05D008098 1.2e-94 350.9 341 53.1
VMungo0251G3325 Vigna mungo HOM05D006455 ORTHO05D008098 1.0e-93 347.8 341 52.5
HPP92_001271 Vanilla planifolia HOM05D006455 ORTHO05D008098 1.3e-93 347.4 335 51.3
Ca_22482_v3 Cicer arietinum L. HOM05D006455 ORTHO05D008098 2.3e-93 346.7 340 51.2
Ca_30349_v3 Cicer arietinum L. HOM05D006455 ORTHO05D008098 2.3e-93 346.7 340 51.2
Manes.12G057900 Manihot esculenta HOM05D006455 ORTHO05D008098 2.3e-93 346.7 347 51.9
Zm00001eb144730 Zea mays HOM05D006455 ORTHO05D008098 1.5e-92 344.0 341 52.5
Psat4g108080 Pisum sativum HOM05D006455 ORTHO05D008098 2.5e-92 343.2 340 51.2
Manes.12G058105 Manihot esculenta HOM05D006455 ORTHO05D008098 1.1e-90 337.8 347 51.6
Sabra14G0133600 Salix brachista HOM05D006455 ORTHO05D008098 1.8e-90 337.0 348 52.9
SHI10210 Sapria himalayana HOM05D006455 ORTHO05D008098 1.2e-89 334.3 370 50.3
Medtr8g071270 Medicago truncatula HOM05D006455 ORTHO05D008098 1.0e-88 331.3 342 49.1
TPR.G31161 Trifolium pratense HOM05D006455 ORTHO05D008098 1.0e-88 331.3 342 49.1
Actinidia23129 Actinidia chinensis HOM05D006455 ORTHO05D008098 2.9e-88 329.7 345 52.8
MBI07_g34151_MAGBIO Magnolia biondii HOM05D006455 ORTHO05D008098 2.8e-83 313.2 325 50.8
SEGI_16096 Sequoiadendron giganteum HOM05D006455 ORTHO05D008098 1.1e-82 311.2 360 44.2
Gohir.D11G150900 Gossypium hirsutum HOM05D006455 ORTHO05D008098 8.5e-80 301.6 225 63.6
Ah.11g050710 Amaranthus hybridus HOM05D006455 ORTHO05D008098 1.4e-79 300.8 348 45.1
EL10Ac5g10573 Beta vulgaris HOM05D006455 ORTHO05D008098 2.3e-77 293.5 226 61.1
Dinv07639 Davidia involucrata HOM05D006455 ORTHO05D008098 5.0e-72 275.8 224 62.1
Manes.12G058904 Manihot esculenta HOM05D006455 ORTHO05D008098 4.2e-71 272.7 214 60.7
HPP92_001254 Vanilla planifolia HOM05D006455 ORTHO05D008098 5.7e-68 262.3 219 57.1
Manes.12G057503 Manihot esculenta HOM05D006455 ORTHO05D008098 3.7e-67 259.6 198 61.1
Manes.12G057505 Manihot esculenta HOM05D006455 ORTHO05D008098 3.7e-67 259.6 198 61.1
Mapoly0109s0061 Marchantia polymorpha HOM05D006455 ORTHO05D008098 7.2e-55 218.8 358 34.4
CDE05G1197 Ceratophyllum demersum HOM05D006455 ORTHO05D008098 8.8e-53 211.8 160 57.5
Pp3c10_13370 Physcomitrium patens HOM05D006455 ORTHO05D008098 2.0e-52 210.7 359 34.5
SMO200G0077 Selaginella moellendorffii HOM05D006455 ORTHO05D008098 2.2e-51 207.2 323 34.4
Oeu030353.1 Olea europaea HOM05D006455 ORTHO05D008098 4.1e-50 203.0 188 55.3
PGSC0003DMG402020303 Solanum tuberosum HOM05D006455 ORTHO05D008098 1.3e-43 181.4 178 51.7
CBR_g48756 Chara braunii HOM05D006455 ORTHO05D000497 1.4e-42 177.9 267 37.5
AagrBONN_evm.TU.Sc2ySwM_228.5553 Anthoceros agrestis HOM05D006455 ORTHO05D008098 2.4e-42 177.2 351 31.9
Oeu030354.1 Olea europaea HOM05D006455 ORTHO05D008098 6.6e-32 142.5 116 62.1
PGSC0003DMG400020304 Solanum tuberosum HOM05D006455 ORTHO05D008098 3.7e-27 126.7 115 53.9
Zm00001eb128100 Zea mays HOM05D006455 ORTHO05D008098 1.9e-26 124.4 142 45.8
Zm00001eb274660 Zea mays HOM05D006455 ORTHO05D008098 3.5e-25 120.2 142 45.1
EL10Ac5g10574 Beta vulgaris HOM05D006455 ORTHO05D008098 1.5e-23 114.8 115 48.7
Phvul.003G297266 Phaseolus vulgaris HOM05D006455 ORTHO05D008098 4.9e-19 99.8 122 41.0
Oeu003682.1 Olea europaea HOM05D006455 ORTHO05D008098 2.1e-17 94.4 123 45.5
Cre03.g197250 Chlamydomonas reinhardtii HOM05D006455 ORTHO05D008098 6.0e-17 92.8 218 31.2
Zm00001eb128090 Zea mays HOM05D006455 ORTHO05D008098 1.7e-16 91.3 115 45.2


User provided reference genes

Program Settings