Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_000332 Daucus carota HOM05D007414 ORTHO05D009482 4.4e-95 351.3 176 100.0
DCAR_031835 Daucus carota HOM05D007414 ORTHO05D009482 2.8e-86 322.0 161 100.0
CSS0022385 Camellia sinensis var. sinensis HOM05D007414 ORTHO05D009482 2.3e-59 232.6 162 74.7
Actinidia02265 Actinidia chinensis HOM05D007414 ORTHO05D009482 8.6e-59 230.7 168 72.0
Rhsim01G0124300 Rhododendron simsii HOM05D007414 ORTHO05D009482 5.6e-58 228.0 162 72.2
Hma1.2p1_1202F.1_g266840 Hydrangea macrophylla HOM05D007414 ORTHO05D009482 9.5e-58 227.3 167 70.1
vmacro12698 Vaccinium macrocarpon HOM05D007414 ORTHO05D009482 9.5e-58 227.3 168 69.6
GSVIVG01013487001 Vitis vinifera HOM05D007414 ORTHO05D009482 1.0e-56 223.8 173 70.5
QL04p017831 Quercus lobata HOM05D007414 ORTHO05D009482 1.4e-56 223.4 167 68.9
COL.COLO4_20658 Corchorus olitorius HOM05D007414 ORTHO05D009482 1.8e-56 223.0 172 66.9
CAN.G1045.37 Capsicum annuum HOM05D007414 ORTHO05D009482 5.2e-56 221.5 168 67.9
Potri.001G027600 Populus trichocarpa HOM05D007414 ORTHO05D009482 1.2e-55 220.3 173 65.9
CiPaw.13G013700 Carya illinoinensis HOM05D007414 ORTHO05D009482 3.4e-55 218.8 168 68.5
ECA234G1800 Erigeron canadensis HOM05D007414 ORTHO05D009482 7.5e-55 217.6 168 69.0
Solyc01g096400.4 Solanum lycopersicum HOM05D007414 ORTHO05D009482 7.5e-55 217.6 169 67.5
Sopen01g040130 Solanum pennellii HOM05D007414 ORTHO05D009482 7.5e-55 217.6 169 67.5
Nn7g36686 Nelumbo nucifera HOM05D007414 ORTHO05D009482 9.8e-55 217.2 168 66.1
HanXRQChr16g0525321 Helianthus annuus HOM05D007414 ORTHO05D009482 1.3e-54 216.9 164 68.9
Atru.chr12.1333 Acer truncatum HOM05D007414 ORTHO05D009482 1.7e-54 216.5 179 63.1
MD02G1287000 Malus domestica HOM05D007414 ORTHO05D009482 1.7e-54 216.5 173 67.6
Sabra01G0020000 Salix brachista HOM05D007414 ORTHO05D009482 1.7e-54 216.5 167 66.5
TAR623G0974 Trochodendron aralioides HOM05D007414 ORTHO05D009482 1.7e-54 216.5 168 67.9
MSTRG.20514 Avicennia marina HOM05D007414 ORTHO05D009482 2.2e-54 216.1 162 67.9
Manes.11G006000 Manihot esculenta HOM05D007414 ORTHO05D009482 2.2e-54 216.1 174 65.5
PGR031G2549 Punica granatum HOM05D007414 ORTHO05D009482 2.2e-54 216.1 173 65.3
Thecc.10G154500 Theobroma cacao HOM05D007414 ORTHO05D009482 2.2e-54 216.1 172 64.5
Dinv22037 Davidia involucrata HOM05D007414 ORTHO05D009482 2.9e-54 215.7 159 71.1
RcHm_v2.0_Chr1g0324301 Rosa chinensis HOM05D007414 ORTHO05D009482 3.7e-54 215.3 173 66.5
CsaV3_5G024500 Cucumis sativus L. HOM05D007414 ORTHO05D009482 4.9e-54 214.9 165 68.5
Duzib114G0511 Durio zibethinus HOM05D007414 ORTHO05D009482 1.1e-53 213.8 172 65.7
Glyma.04G137000 Glycine max HOM05D007414 ORTHO05D009482 1.4e-53 213.4 169 65.7
FvH4_7g03070 Fragaria vesca HOM05D006097 ORTHO05D008538 2.4e-53 212.6 173 65.9
FAN06G2659 Fragaria x ananassa HOM05D007414 ORTHO05D009482 2.4e-53 212.6 173 65.9
PGSC0003DMG400018334 Solanum tuberosum HOM05D007414 ORTHO05D009482 2.4e-53 212.6 169 66.3
VMungo1080G1369 Vigna mungo HOM05D007414 ORTHO05D009482 4.1e-53 211.8 169 65.7
FAN03G2686 Fragaria x ananassa HOM05D007414 ORTHO05D009482 5.4e-53 211.5 173 65.3
Glyma.11G155300 Glycine max HOM05D007414 ORTHO05D009482 7.0e-53 211.1 169 65.1
Gorai.010G216100 Gossypium raimondii HOM05D007414 ORTHO05D009482 7.0e-53 211.1 173 64.7
Phvul.005G026400 Phaseolus vulgaris HOM05D007414 ORTHO05D009482 9.2e-53 210.7 169 65.1
Nitab4.5_0004955g0030 Nicotiana tabacum HOM05D007414 ORTHO05D009482 1.2e-52 210.3 164 67.1
Migut.O00949 Erythranthe guttata HOM05D007414 ORTHO05D009482 4.6e-52 208.4 163 67.5
TWI15G0498 Tripterygium wilfordii HOM05D007414 ORTHO05D009482 4.6e-52 208.4 167 63.5
ClCG01G007530 Citrullus lanatus HOM05D007414 ORTHO05D009482 5.9e-52 208.0 165 65.5
FAN10G2712 Fragaria x ananassa HOM05D007414 ORTHO05D009482 5.9e-52 208.0 173 64.2
Nitab4.5_0000307g0260 Nicotiana tabacum HOM05D007414 ORTHO05D009482 5.9e-52 208.0 164 67.7
CANSAT56G3550 Cannabis sativa HOM05D007414 ORTHO05D009482 2.3e-51 206.1 173 64.7
Eucgr.G03234 Eucalyptus grandis HOM05D007414 ORTHO05D009482 3.0e-51 205.7 174 62.6
arahy.Tifrunner.gnm1.ann1.GMDI7B Arachis hypogaea HOM05D007414 ORTHO05D009482 6.6e-51 204.5 169 64.5
Lj3g0021878 Lotus japonicus HOM05D007414 ORTHO05D009482 6.6e-51 204.5 168 63.7
arahy.Tifrunner.gnm1.ann1.XZAR1L Arachis hypogaea HOM05D007414 ORTHO05D009482 1.9e-50 203.0 169 63.3
Lalb_Chr25g0282101 Lupinus albus HOM05D007414 ORTHO05D009482 1.9e-50 203.0 169 63.9
Medtr3g014680 Medicago truncatula HOM05D007414 ORTHO05D009482 1.9e-50 203.0 170 64.1
Gohir.A10G185400 Gossypium hirsutum HOM05D007414 ORTHO05D009482 5.6e-50 201.4 172 61.0
Cc02_g30210 Coffea canephora HOM05D007414 ORTHO05D009482 1.6e-49 199.9 168 64.3
Gohir.D10G192600 Gossypium hirsutum HOM05D007414 ORTHO05D009482 3.6e-49 198.7 172 60.5
Lsat_1_v5_gn_4_29901 Lactuca sativa HOM05D007414 ORTHO05D009482 3.6e-49 198.7 164 63.4
Ciclev10028543m.g Citrus clementina HOM05D007414 ORTHO05D009482 1.1e-48 197.2 172 62.2
Gorai.011G215300 Gossypium raimondii HOM05D007414 ORTHO05D009482 1.1e-48 197.2 172 60.5
THA.LOC104826727 Tarenaya hassleriana HOM05D007414 ORTHO05D009482 2.3e-48 196.1 162 64.2
MELO3C005149.2 Cucumis melo HOM05D007414 ORTHO05D009482 6.8e-48 194.5 187 57.8
Psat5g222240 Pisum sativum HOM05D007414 ORTHO05D009482 1.5e-47 193.4 169 62.1
Ah.12g062800 Amaranthus hybridus HOM05D007414 ORTHO05D009482 4.9e-46 188.3 162 61.7
PSO339G0457 Papaver somniferum HOM05D007414 ORTHO05D009482 9.2e-45 184.1 180 57.2
AUR62032647 Chenopodium quinoa HOM05D007414 ORTHO05D009482 1.6e-44 183.3 161 60.2
PSO384G0147 Papaver somniferum HOM05D007414 ORTHO05D009482 1.6e-44 183.3 180 58.3
Potri.003G196200 Populus trichocarpa HOM05D007414 ORTHO05D009482 2.0e-44 183.0 170 58.2
AUR62026859 Chenopodium quinoa HOM05D007414 ORTHO05D009482 2.7e-44 182.6 161 59.6
Aqoxy1G00360 Aquilegia oxysepala HOM05D007414 ORTHO05D009482 3.3e-42 175.6 169 57.4
EL10Ac2g02800 Beta vulgaris HOM05D007414 ORTHO05D009482 2.1e-41 172.9 163 57.7
Sed0006433 Sechium edule HOM05D007414 ORTHO05D009482 2.1e-41 172.9 117 72.6
ATR0745G014 Amborella trichopoda HOM05D007414 ORTHO05D009482 4.0e-40 168.7 183 53.0
Peaxi162Scf00767g00524 Petunia axillaris HOM05D007414 ORTHO05D009482 1.3e-38 163.7 114 72.8
Manes.15G192920 Manihot esculenta HOM05D007414 ORTHO05D009482 4.9e-38 161.8 162 54.9
Nn7g36678 Nelumbo nucifera HOM05D007414 ORTHO05D009482 4.9e-38 161.8 157 57.3
Os01g0272800 Oryza sativa ssp. japonica HOM05D007414 ORTHO05D009482 4.9e-38 161.8 173 53.2
Gohir.A06G174800 Gossypium hirsutum HOM05D007414 ORTHO05D009482 9.2e-37 157.5 113 70.8
Sc11g0006450 Simmondsia chinensis HOM05D007414 ORTHO05D009482 9.2e-37 157.5 165 57.6
SEGI_40936 Sequoiadendron giganteum HOM05D007414 ORTHO05D009482 1.2e-36 157.1 183 50.8
Gohir.D06G184800 Gossypium hirsutum HOM05D007414 ORTHO05D009482 2.1e-36 156.4 113 70.8
Hund13359 Selenicereus undatus HOM05D007414 ORTHO05D009482 8.6e-35 151.0 196 47.4
AagrBONN_evm.TU.Sc2ySwM_362.1466 Anthoceros agrestis HOM05D007414 ORTHO05D009482 6.2e-25 118.2 182 41.2
Mapoly0007s0139 Marchantia polymorpha HOM05D007414 ORTHO05D009482 1.1e-21 107.5 184 37.0
Pp3c11_910 Physcomitrium patens HOM05D007414 ORTHO05D009482 2.4e-21 106.3 187 39.6
Haze_03038 Corylus avellana HOM05D007414 ORTHO05D009482 1.9e-18 96.7 154 41.6
SEGI_36011 Sequoiadendron giganteum HOM05D007414 ORTHO05D009482 1.4e-08 63.9 47 61.7
Cre03.g145067 Chlamydomonas reinhardtii HOM05D007414 ORTHO05D009482 6.9e-08 61.6 82 42.7
Oeu014631.1 Olea europaea HOM05D007414 ORTHO05D009482 9.0e-08 61.2 50 62.0
PRCOL_00006348 Prasinoderma coloniale HOM05D007414 ORTHO05D333730 2.6e-07 59.7 107 39.3


User provided reference genes

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