Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_000205 Daucus carota HOM05D005286 ORTHO05D006348 2.9e-117 425.2 213 100.0
CiPaw.03G118000 Carya illinoinensis HOM05D005286 ORTHO05D006348 9.0e-79 297.4 188 77.7
Ciclev10000962m.g Citrus clementina HOM05D005286 ORTHO05D006348 4.5e-78 295.0 188 76.6
TAR625G0087 Trochodendron aralioides HOM05D005286 ORTHO05D006348 5.8e-78 294.7 188 76.1
ECA248G0233 Erigeron canadensis HOM05D005286 ORTHO05D006348 2.2e-77 292.7 198 74.7
Dinv24561 Davidia involucrata HOM05D005286 ORTHO05D006348 5.0e-77 291.6 183 77.6
Migut.H00797 Erythranthe guttata HOM05D005286 ORTHO05D006348 5.0e-77 291.6 188 78.7
Lsat_1_v5_gn_1_78000 Lactuca sativa HOM05D005286 ORTHO05D006348 6.5e-77 291.2 186 76.9
Dinv15529 Davidia involucrata HOM05D005286 ORTHO05D006348 1.4e-76 290.0 184 76.6
Atru.chr4.988 Acer truncatum HOM05D005286 ORTHO05D006348 4.2e-76 288.5 188 75.5
Hma1.2p1_3117F.1_g332810 Hydrangea macrophylla HOM05D005286 ORTHO05D006348 5.5e-76 288.1 190 75.3
GSVIVG01022340001 Vitis vinifera HOM05D005286 ORTHO05D006348 5.5e-76 288.1 188 75.5
Duzib147G1331 Durio zibethinus HOM05D005286 ORTHO05D006348 7.2e-76 287.7 194 71.1
MSTRG.23499 Avicennia marina HOM05D005286 ORTHO05D006348 9.3e-76 287.3 186 77.4
Aqoxy5G02419 Aquilegia oxysepala HOM05D005286 ORTHO05D006348 1.6e-75 286.6 188 72.9
Phvul.009G154600 Phaseolus vulgaris HOM05D005286 ORTHO05D006348 3.5e-75 285.4 188 72.9
Ah.06g191030 Amaranthus hybridus HOM05D005286 ORTHO05D006348 4.6e-75 285.0 191 71.2
AUR62006858 Chenopodium quinoa HOM05D005286 ORTHO05D006348 4.6e-75 285.0 188 73.4
Thecc.01G137300 Theobroma cacao HOM05D005286 ORTHO05D006348 4.6e-75 285.0 185 74.1
VMungo1309G1016 Vigna mungo HOM05D005286 ORTHO05D006348 6.1e-75 284.6 188 72.9
AUR62000514 Chenopodium quinoa HOM05D005286 ORTHO05D006348 1.3e-74 283.5 188 72.9
QL10p041275 Quercus lobata HOM05D005286 ORTHO05D006348 1.3e-74 283.5 188 72.9
CSS0034769 Camellia sinensis var. sinensis HOM05D005286 ORTHO05D006348 1.8e-74 283.1 186 74.2
Gohir.A12G085400 Gossypium hirsutum HOM05D005286 ORTHO05D006348 1.8e-74 283.1 185 73.5
HanXRQChr01g0017141 Helianthus annuus HOM05D005286 ORTHO05D006348 2.3e-74 282.7 185 76.2
Cfa021278 Carpinus fangiana HOM05D005286 ORTHO05D006348 3.0e-74 282.3 188 75.0
Glyma.06G155750 Glycine max HOM05D005286 ORTHO05D006348 3.0e-74 282.3 188 72.3
Sc09g0002230 Simmondsia chinensis HOM05D005286 ORTHO05D006348 3.9e-74 282.0 188 70.7
EL10Ac4g09623 Beta vulgaris HOM05D005286 ORTHO05D006348 5.1e-74 281.6 188 72.3
CSS0004303 Camellia sinensis var. sinensis HOM05D005286 ORTHO05D006348 5.1e-74 281.6 186 74.2
Oeu037874.1 Olea europaea HOM05D005286 ORTHO05D006348 6.7e-74 281.2 188 74.5
Gohir.D12G083400 Gossypium hirsutum HOM05D005286 ORTHO05D006348 8.7e-74 280.8 185 73.5
Actinidia16523 Actinidia chinensis HOM05D005286 ORTHO05D006348 1.1e-73 280.4 188 73.9
Lj4A421T8 Lonicera japonica HOM05D005286 ORTHO05D006348 1.9e-73 279.6 186 73.7
QL10p041264 Quercus lobata HOM05D005286 ORTHO05D006348 1.9e-73 279.6 184 72.3
Gorai.008G094500 Gossypium raimondii HOM05D005286 ORTHO05D006348 2.5e-73 279.3 185 73.5
MD15G1135000 Malus domestica HOM05D005286 ORTHO05D006348 9.7e-73 277.3 186 73.1
SGA_v2.0_scaffold189G40378 Striga asiatica HOM05D005286 ORTHO05D006348 9.7e-73 277.3 189 74.6
Duzib187G0999 Durio zibethinus HOM05D005286 ORTHO05D006348 1.3e-72 276.9 185 73.0
Lalb_Chr23g0272691 Lupinus albus HOM05D005286 ORTHO05D006348 1.6e-72 276.6 188 70.7
AT5G63910 Arabidopsis thaliana HOM05D005286 ORTHO05D006348 2.2e-72 276.2 185 71.9
AL8G41150 Arabidopsis lyrata HOM05D005286 ORTHO05D006348 2.8e-72 275.8 185 71.4
Sabra07G0083800 Salix brachista HOM05D005286 ORTHO05D006348 2.8e-72 275.8 188 72.9
Hund21799 Selenicereus undatus HOM05D005286 ORTHO05D006348 8.2e-72 274.2 191 69.6
Carub.0008s2471 Capsella rubella HOM05D005286 ORTHO05D006348 1.1e-71 273.9 185 71.4
CARHR277830 Cardamine hirsuta HOM05D005286 ORTHO05D006348 1.1e-71 273.9 186 71.5
Lj1g0003788 Lotus japonicus HOM05D003519 ORTHO05D004443 1.1e-71 273.9 186 71.0
TWI75G1712 Tripterygium wilfordii HOM05D005286 ORTHO05D006348 1.1e-71 273.9 188 71.3
Potri.007G101600 Populus trichocarpa HOM05D005286 ORTHO05D006348 1.8e-71 273.1 188 72.9
Nn5g28436 Nelumbo nucifera HOM05D005286 ORTHO05D006348 3.1e-71 272.3 196 67.9
A06p30530 Brassica napus HOM05D005286 ORTHO05D006348 4.1e-71 271.9 185 70.8
BraA06t26002Z Brassica rapa HOM05D005286 ORTHO05D006348 4.1e-71 271.9 185 70.8
CSS0028284 Camellia sinensis var. sinensis HOM05D005286 ORTHO05D006348 4.1e-71 271.9 186 71.0
BcaC01g02644 Brassica carinata HOM05D005286 ORTHO05D006348 5.3e-71 271.6 185 70.8
Nn1g08960 Nelumbo nucifera HOM05D005286 ORTHO05D006348 5.3e-71 271.6 188 69.7
Prupe.4G274700 Prunus persica HOM05D005286 ORTHO05D006348 5.3e-71 271.6 186 71.5
Rhsim08G0000400 Rhododendron simsii HOM05D005286 ORTHO05D006348 5.3e-71 271.6 188 70.7
C03p62500 Brassica napus HOM05D005286 ORTHO05D006348 9.0e-71 270.8 185 70.3
BolC3t18507H Brassica oleracea HOM05D005286 ORTHO05D006348 9.0e-71 270.8 185 70.3
PGR119G0364 Punica granatum HOM05D005286 ORTHO05D006348 9.0e-71 270.8 188 70.7
Sabra07G0083900 Salix brachista HOM05D005286 ORTHO05D006348 9.0e-71 270.8 188 71.3
vmacro18685 Vaccinium macrocarpon HOM05D005286 ORTHO05D006348 9.0e-71 270.8 186 71.5
TPR.G33580 Trifolium pratense HOM05D005286 ORTHO05D006348 1.5e-70 270.0 188 70.2
RcHm_v2.0_Chr2g0122521 Rosa chinensis HOM05D005286 ORTHO05D006348 2.0e-70 269.6 185 70.3
Sp2g26980 Schrenkiella parvula HOM05D005286 ORTHO05D006348 2.0e-70 269.6 185 70.3
CANSAT35G0194 Cannabis sativa HOM05D005286 ORTHO05D006348 2.6e-70 269.2 188 70.7
Hund07236 Selenicereus undatus HOM05D005286 ORTHO05D006348 4.5e-70 268.5 187 69.5
THA.LOC104819345 Tarenaya hassleriana HOM05D005286 ORTHO05D006348 4.5e-70 268.5 185 70.3
Hma1.2p1_0310F.1_g121020 Hydrangea macrophylla HOM05D005286 ORTHO05D006348 5.9e-70 268.1 168 78.0
PSO170G0528 Papaver somniferum HOM05D005286 ORTHO05D006348 7.7e-70 267.7 184 71.2
FAN28G1250 Fragaria x ananassa HOM05D005286 ORTHO05D006348 1.0e-69 267.3 185 70.3
FAN23G2334 Fragaria x ananassa HOM05D005286 ORTHO05D006348 1.3e-69 266.9 185 69.2
Peaxi162Scf00151g00811 Petunia axillaris HOM05D005286 ORTHO05D006348 1.3e-69 266.9 186 68.8
Solyc12g088020.1 Solanum lycopersicum HOM05D005286 ORTHO05D006348 2.9e-69 265.8 186 66.1
Sopen12g030050 Solanum pennellii HOM05D005286 ORTHO05D006348 2.9e-69 265.8 186 66.7
arahy.Tifrunner.gnm1.ann1.ZN9YLD Arachis hypogaea HOM05D005286 ORTHO05D006348 3.8e-69 265.4 185 69.2
Aa31LG1G17980 Aethionema arabicum HOM05D005286 ORTHO05D006348 5.0e-69 265.0 185 69.2
BcaB02g09762 Brassica carinata HOM05D005286 ORTHO05D006348 5.0e-69 265.0 185 69.7
Ca_16981_v3 Cicer arietinum L. HOM05D005286 ORTHO05D006348 8.5e-69 264.2 188 68.6
FvH4_1g24860 Fragaria vesca HOM05D005286 ORTHO05D006348 8.5e-69 264.2 185 68.6
FAN19G2916 Fragaria x ananassa HOM05D005286 ORTHO05D006348 8.5e-69 264.2 185 68.6
MBI06_g35210_MAGBIO Magnolia biondii HOM05D005286 ORTHO05D006348 8.5e-69 264.2 182 70.9
Potri.007G101700 Populus trichocarpa HOM05D005286 ORTHO05D006348 8.5e-69 264.2 188 69.7
Sed0025698 Sechium edule HOM05D005286 ORTHO05D006348 8.5e-69 264.2 188 68.6
arahy.Tifrunner.gnm1.ann1.7K8RK5 Arachis hypogaea HOM05D005286 ORTHO05D006348 1.1e-68 263.8 185 68.6
FAN26G1990 Fragaria x ananassa HOM05D005286 ORTHO05D006348 1.4e-68 263.5 185 68.6
THA.LOC104818420 Tarenaya hassleriana HOM05D005286 ORTHO05D006348 1.4e-68 263.5 185 68.6
ClCG04G002290 Citrullus lanatus HOM05D005286 ORTHO05D006348 2.5e-68 262.7 188 68.1
Manes.12G159000 Manihot esculenta HOM05D005286 ORTHO05D006348 4.2e-68 261.9 185 70.8
Cc07_g21020 Coffea canephora HOM05D005286 ORTHO05D006348 7.2e-68 261.2 186 69.4
Oeu039334.1 Olea europaea HOM05D005286 ORTHO05D006348 7.2e-68 261.2 188 70.2
CAN.G1104.7 Capsicum annuum HOM05D005286 ORTHO05D006348 2.7e-67 259.2 186 65.1
CsaV3_4G030380 Cucumis sativus L. HOM05D005286 ORTHO05D006348 3.6e-67 258.8 188 67.0
ATR0138G018 Amborella trichopoda HOM05D005286 ORTHO05D006348 6.1e-67 258.1 188 68.1
PGSC0003DMG400045338 Solanum tuberosum HOM05D005286 ORTHO05D006348 6.1e-67 258.1 183 67.2
Gohir.D12G083401 Gossypium hirsutum HOM05D005286 ORTHO05D006348 1.0e-66 257.3 170 73.5
Medtr3g096675 Medicago truncatula HOM05D005286 ORTHO05D006348 1.4e-66 256.9 188 66.5
MELO3C008897.2 Cucumis melo HOM05D005286 ORTHO05D006348 8.8e-66 254.2 186 66.1
CSS0025452 Camellia sinensis var. sinensis HOM05D005286 ORTHO05D006348 2.0e-65 253.1 176 69.3
HPP92_011629 Vanilla planifolia HOM05D005286 ORTHO05D006348 5.9e-62 241.5 188 61.2
Zm00001eb434510 Zea mays HOM05D005286 ORTHO05D006348 5.9e-62 241.5 186 64.5
Eucgr.I00123 Eucalyptus grandis HOM05D005286 ORTHO05D006348 3.8e-61 238.8 173 69.9
SEGI_22884 Sequoiadendron giganteum HOM05D005286 ORTHO05D006348 1.8e-58 229.9 179 60.9
SEGI_35897 Sequoiadendron giganteum HOM05D005286 ORTHO05D006348 1.8e-58 229.9 179 60.9
Nitab4.5_0000954g0020 Nicotiana tabacum HOM05D005286 ORTHO05D006348 2.3e-58 229.6 186 61.8
Thhalv10004131m.g Eutrema salsugineum HOM05D005286 ORTHO05D006348 1.1e-55 220.7 185 61.1
Cpa.g.sc37.7 Carica papaya HOM05D005286 ORTHO05D006348 1.0e-53 214.2 180 62.2
Nitab4.5_0000432g0040 Nicotiana tabacum HOM05D005286 ORTHO05D006348 2.1e-51 206.5 168 61.9
Mapoly0032s0088 Marchantia polymorpha HOM05D005286 ORTHO05D006348 2.7e-51 206.1 185 55.7
DCAR_019994 Daucus carota HOM05D005286 ORTHO05D006348 1.3e-48 197.2 109 94.5
Psat5g059680 Pisum sativum HOM05D005286 ORTHO05D006348 1.3e-48 197.2 126 77.0
Haze_10873 Corylus avellana HOM05D005286 ORTHO05D006348 3.8e-45 185.7 185 58.4
SMO119G0327 Selaginella moellendorffii HOM05D005286 ORTHO05D006348 1.0e-42 177.6 188 46.8
unitig_748.g8002 Utricularia gibba HOM05D005286 ORTHO05D006348 1.0e-37 161.0 114 66.7
CBR_g8546 Chara braunii HOM05D005286 ORTHO05D006348 2.2e-37 159.8 185 42.7
COL.COLO4_35813 Corchorus olitorius HOM05D005286 ORTHO05D006348 3.6e-35 152.5 185 47.6
AagrBONN_evm.TU.Sc2ySwM_362.2029 Anthoceros agrestis HOM05D005286 ORTHO05D006348 4.0e-34 149.1 130 55.4
Pp3c3_10560 Physcomitrium patens HOM05D005286 ORTHO05D006348 1.0e-29 134.4 126 53.2
CDE08G1664 Ceratophyllum demersum HOM05D005286 ORTHO05D006348 7.3e-20 101.7 73 60.3
CBR_g864 Chara braunii HOM05D005286 ORTHO05D006348 1.7e-13 80.5 199 26.6
SalBow2G0549 Salvia bowleyana HOM05D002652 ORTHO05D002739 3.1e-10 69.7 49 77.6
unitig_748.g8003 Utricularia gibba HOM05D005286 ORTHO05D006348 2.6e-09 66.6 45 80.0


User provided reference genes

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