Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_000185 Daucus carota HOM05D006112 ORTHO05D007898 2.7e-123 445.3 214 100.0
Actinidia13602 Actinidia chinensis HOM05D006112 ORTHO05D007898 3.4e-57 225.7 174 63.2
Rhsim03G0162800 Rhododendron simsii HOM05D006112 ORTHO05D007898 1.3e-56 223.8 177 61.0
Actinidia24978 Actinidia chinensis HOM05D006112 ORTHO05D007898 2.2e-56 223.0 179 60.3
Dinv16859 Davidia involucrata HOM05D006112 ORTHO05D007898 2.8e-56 222.6 181 60.2
vmacro22349 Vaccinium macrocarpon HOM05D006112 ORTHO05D007898 4.8e-56 221.9 176 60.8
GSVIVG01014003001 Vitis vinifera HOM05D006112 ORTHO05D007898 6.3e-56 221.5 180 61.7
TAR629G0439 Trochodendron aralioides HOM05D006112 ORTHO05D007898 3.5e-54 215.7 192 57.8
QL09p028373 Quercus lobata HOM05D006112 ORTHO05D007898 1.3e-53 213.8 184 56.5
CSS0045516 Camellia sinensis var. sinensis HOM05D006112 ORTHO05D007898 6.5e-53 211.5 178 57.3
Lsat_1_v5_gn_2_127741 Lactuca sativa HOM05D006112 ORTHO05D007898 3.6e-51 205.7 181 56.9
Cfa013565 Carpinus fangiana HOM05D006112 ORTHO05D007898 1.4e-50 203.8 177 57.1
CiPaw.08G040900 Carya illinoinensis HOM05D006112 ORTHO05D007898 1.8e-50 203.4 176 56.2
HanXRQChr14g0461251 Helianthus annuus HOM05D006112 ORTHO05D007898 1.2e-49 200.7 180 55.6
MSTRG.8838 Avicennia marina HOM05D006112 ORTHO05D007898 3.4e-49 199.1 180 51.7
Cc02_g04600 Coffea canephora HOM05D006112 ORTHO05D007898 2.2e-48 196.4 172 57.0
DCAR_014629 Daucus carota HOM05D006112 ORTHO05D007898 4.9e-48 195.3 177 57.1
SGA_v2.0_scaffold60G20804 Striga asiatica HOM05D006112 ORTHO05D000096 2.4e-47 193.0 174 52.3
ATR0057G004 Amborella trichopoda HOM05D006112 ORTHO05D007898 3.5e-46 189.1 169 54.4
Ciclev10004561m.g Citrus clementina HOM05D006112 ORTHO05D007898 3.5e-46 189.1 178 53.9
Migut.F00511 Erythranthe guttata HOM05D006112 ORTHO05D007898 3.5e-46 189.1 174 54.0
Nitab4.5_0002112g0190 Nicotiana tabacum HOM05D006112 ORTHO05D007898 5.9e-46 188.3 176 51.1
Nn1g00903 Nelumbo nucifera HOM05D006112 ORTHO05D007898 1.0e-45 187.6 175 53.7
Lj3g0026682 Lotus japonicus HOM05D006112 ORTHO05D007898 2.9e-45 186.0 173 54.9
SalBow3G0466 Salvia bowleyana HOM05D006112 ORTHO05D007898 3.8e-45 185.7 180 50.0
SalBow3G1501 Salvia bowleyana HOM05D006112 ORTHO05D007898 3.8e-45 185.7 180 50.0
RcHm_v2.0_Chr1g0373861 Rosa chinensis HOM05D006112 ORTHO05D007898 6.6e-45 184.9 170 54.7
CANSAT56G1053 Cannabis sativa HOM05D006112 ORTHO05D007898 1.5e-44 183.7 173 53.2
Sed0004254 Sechium edule HOM05D006112 ORTHO05D007898 1.5e-44 183.7 177 53.7
Aqoxy3G02789 Aquilegia oxysepala HOM05D006112 ORTHO05D007898 3.3e-44 182.6 201 48.3
PSO782G1845 Papaver somniferum HOM05D006112 ORTHO05D007898 4.3e-44 182.2 176 52.8
FvH4_7g27040 Fragaria vesca HOM05D006112 ORTHO05D007898 5.6e-44 181.8 181 51.9
FAN06G4204 Fragaria x ananassa HOM05D006112 ORTHO05D007898 5.6e-44 181.8 181 51.9
FAN06G4928 Fragaria x ananassa HOM05D006112 ORTHO05D007898 5.6e-44 181.8 181 51.9
Lj8A45G61 Lonicera japonica HOM05D006112 ORTHO05D007898 9.5e-44 181.0 142 59.2
FAN10G3673 Fragaria x ananassa HOM05D006112 ORTHO05D007898 1.2e-43 180.6 181 51.9
Nitab4.5_0000694g0190 Nicotiana tabacum HOM05D006112 ORTHO05D007898 1.2e-43 180.6 176 50.6
PSO063G4872 Papaver somniferum HOM05D006112 ORTHO05D007898 1.2e-43 180.6 176 52.3
Duzib068G0107 Durio zibethinus HOM05D006112 ORTHO05D007898 2.1e-43 179.9 178 52.8
FAN03G2150 Fragaria x ananassa HOM05D006112 ORTHO05D007898 2.1e-43 179.9 181 51.4
Gohir.A12G197000 Gossypium hirsutum HOM05D006112 ORTHO05D007898 2.1e-43 179.9 190 50.5
HanXRQChr16g0512971 Helianthus annuus HOM05D006112 ORTHO05D007898 2.8e-43 179.5 178 51.1
Gorai.008G214800 Gossypium raimondii HOM05D006112 ORTHO05D007898 8.0e-43 177.9 190 50.0
Gohir.D12G199600 Gossypium hirsutum HOM05D006112 ORTHO05D007898 1.8e-42 176.8 190 50.0
Thecc.03G150100 Theobroma cacao HOM05D006112 ORTHO05D007898 5.2e-42 175.3 188 47.9
Lalb_Chr18g0048951 Lupinus albus HOM05D006112 ORTHO05D007898 6.8e-42 174.9 172 52.9
Glyma.04G121300 Glycine max HOM05D006112 ORTHO05D007898 8.9e-42 174.5 178 52.8
Glyma.06G317600 Glycine max HOM05D006112 ORTHO05D007898 1.2e-41 174.1 178 52.8
ClCG01G004560 Citrullus lanatus HOM05D006112 ORTHO05D007898 1.5e-41 173.7 172 52.3
Medtr3g008260 Medicago truncatula HOM05D006112 ORTHO05D007898 1.5e-41 173.7 178 52.2
Prupe.2G273600 Prunus persica HOM05D006112 ORTHO05D007898 1.5e-41 173.7 175 53.7
ECA232G0586 Erigeron canadensis HOM05D006112 ORTHO05D007898 2.0e-41 173.3 174 50.0
Sopen05g004550 Solanum pennellii HOM05D006112 ORTHO05D007898 2.0e-41 173.3 180 49.4
VMungo1080G0168 Vigna mungo HOM05D006112 ORTHO05D007898 2.6e-41 172.9 178 51.7
Psat5g228560 Pisum sativum HOM05D006112 ORTHO05D007898 1.3e-40 170.6 172 51.2
Ca_14070_v3 Cicer arietinum L. HOM05D006112 ORTHO05D007898 1.7e-40 170.2 179 50.3
Phvul.005G009000 Phaseolus vulgaris HOM05D006112 ORTHO05D007898 2.2e-40 169.9 178 50.6
THA.LOC104808276 Tarenaya hassleriana HOM05D006112 ORTHO05D007898 8.3e-40 167.9 188 46.8
Atru.chr1.860 Acer truncatum HOM05D006112 ORTHO05D007898 1.1e-39 167.5 180 48.9
Potri.004G233300 Populus trichocarpa HOM05D006112 ORTHO05D007898 4.1e-39 165.6 184 48.9
COL.COLO4_14061 Corchorus olitorius HOM05D006112 ORTHO05D007898 5.4e-39 165.2 181 47.5
AT5G51290 Arabidopsis thaliana HOM05D006112 ORTHO05D007898 7.0e-39 164.9 176 46.6
Sc19g0002110 Simmondsia chinensis HOM05D006112 ORTHO05D007898 1.2e-38 164.1 167 47.3
Carub.0008s1132 Capsella rubella HOM05D006112 ORTHO05D007898 1.6e-38 163.7 193 45.1
AL8G25560 Arabidopsis lyrata HOM05D006112 ORTHO05D007898 2.0e-38 163.3 195 45.1
Manes.06G132300 Manihot esculenta HOM05D006112 ORTHO05D007898 2.0e-38 163.3 179 49.2
Aa31LG3G7790 Aethionema arabicum HOM05D006112 ORTHO05D007898 5.9e-38 161.8 186 46.2
TPR.G12233 Trifolium pratense HOM05D006112 ORTHO05D007898 1.7e-37 160.2 178 47.8
CsaV3_5G004820 Cucumis sativus L. HOM05D006112 ORTHO05D007898 5.0e-37 158.7 172 48.3
Thhalv10012981m.g Eutrema salsugineum HOM05D006112 ORTHO05D007898 1.1e-36 157.5 177 46.9
CAN.G610.10 Capsicum annuum HOM05D006112 ORTHO05D007898 1.9e-36 156.8 166 47.6
BcaC01g06091 Brassica carinata HOM05D006112 ORTHO05D007898 2.5e-36 156.4 177 45.8
MD07G1250200 Malus domestica HOM05D006112 ORTHO05D007898 9.5e-36 154.5 131 56.5
Peaxi162Scf00205g01426 Petunia axillaris HOM05D006112 ORTHO05D007898 1.6e-35 153.7 194 42.8
C03p19110 Brassica napus HOM05D006112 ORTHO05D007898 2.1e-35 153.3 177 44.6
BcaC01g06116 Brassica carinata HOM05D006112 ORTHO05D007898 2.8e-35 152.9 177 44.6
BolC3t14299H Brassica oleracea HOM05D006112 ORTHO05D007898 2.8e-35 152.9 177 44.6
MD01G1178000 Malus domestica HOM05D006112 ORTHO05D007898 4.7e-35 152.1 173 48.0
A03p16230 Brassica napus HOM05D006112 ORTHO05D007898 8.0e-35 151.4 177 44.1
BraA03t10914Z Brassica rapa HOM05D006112 ORTHO05D007898 8.0e-35 151.4 177 44.1
CDE04G0237 Ceratophyllum demersum HOM05D006112 ORTHO05D007898 1.0e-34 151.0 171 43.9
arahy.Tifrunner.gnm1.ann1.35K7H0 Arachis hypogaea HOM05D006112 ORTHO05D007898 2.3e-34 149.8 216 39.8
arahy.Tifrunner.gnm1.ann1.8PZY5G Arachis hypogaea HOM05D006112 ORTHO05D007898 8.9e-34 147.9 216 39.4
HPP92_025696 Vanilla planifolia HOM05D006112 ORTHO05D007898 8.9e-34 147.9 178 44.9
TWI39G0082 Tripterygium wilfordii HOM05D006112 ORTHO05D007898 1.2e-33 147.5 180 44.4
AUR62015446 Chenopodium quinoa HOM05D006112 ORTHO05D007898 4.4e-33 145.6 173 46.2
Hund04575 Selenicereus undatus HOM05D006112 ORTHO05D007898 1.7e-32 143.7 182 44.5
EL10Ac3g05869 Beta vulgaris HOM05D006112 ORTHO05D007898 2.2e-32 143.3 183 43.2
AUR62002234 Chenopodium quinoa HOM05D006112 ORTHO05D007898 4.9e-32 142.1 173 45.1
Eucgr.K00133 Eucalyptus grandis HOM05D006112 ORTHO05D007898 3.2e-31 139.4 177 43.5
Lj1C976G20 Lonicera japonica HOM05D006112 ORTHO05D007898 1.2e-30 137.5 87 67.8
Os02g0656200 Oryza sativa ssp. japonica HOM05D006112 ORTHO05D007898 5.0e-29 132.1 165 41.8
Duzib205G0908 Durio zibethinus HOM05D006112 ORTHO05D007898 7.3e-28 128.3 167 42.5
Ah.07g207560 Amaranthus hybridus HOM05D006112 ORTHO05D007898 4.7e-27 125.6 140 42.1
PGR142G3417 Punica granatum HOM05D006112 ORTHO05D007898 1.4e-26 124.0 88 62.5
ECA238G2778 Erigeron canadensis HOM05D006112 ORTHO05D007898 2.3e-26 123.2 89 59.6
MELO3C005488.2 Cucumis melo HOM05D006112 ORTHO05D007898 3.1e-26 122.9 164 41.5
unitig_37.g11924 Utricularia gibba HOM05D006112 ORTHO05D007898 1.3e-24 117.5 226 31.0
Zm00001eb186450 Zea mays HOM05D006112 ORTHO05D007898 2.2e-24 116.7 170 38.8
SMO166G0006 Selaginella moellendorffii HOM05D006112 ORTHO05D007898 1.1e-23 114.4 182 34.6
CARHR256750 Cardamine hirsuta HOM05D006112 ORTHO05D007898 2.7e-22 109.8 87 54.0
SEGI_25249 Sequoiadendron giganteum HOM05D006112 ORTHO05D007898 2.5e-20 103.2 124 40.3
RcHm_v2.0_Chr1g0337211 Rosa chinensis HOM05D006112 ORTHO05D007898 5.2e-18 95.5 88 50.0
Pp3c14_17730 Physcomitrium patens HOM05D006112 ORTHO05D007898 5.8e-17 92.0 173 29.5
Pp3c2_4480 Physcomitrium patens HOM05D006112 ORTHO05D007898 8.4e-16 88.2 179 30.2
Mapoly0032s0128 Marchantia polymorpha HOM05D006112 ORTHO05D007898 1.6e-14 84.0 88 40.9
Cpa.g.sc13.271 Carica papaya HOM05D006112 ORTHO05D007898 3.9e-13 79.3 176 34.1
Nn6g33855 Nelumbo nucifera HOM05D006112 ORTHO05D007898 8.6e-13 78.2 93 48.4
AagrBONN_evm.TU.Sc2ySwM_368.374 Anthoceros agrestis HOM05D006112 ORTHO05D007898 1.6e-11 73.9 87 39.1
Solyc05g008790.4 Solanum lycopersicum HOM05D006112 ORTHO05D007898 6.2e-11 72.0 54 53.7


User provided reference genes

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