Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_000094 Daucus carota HOM05D004388 ORTHO05D005106 9.3e-60 233.4 124 100.0
DCAR_029046 Daucus carota HOM05D004388 ORTHO05D005106 9.3e-60 233.4 124 100.0
DCAR_001610 Daucus carota HOM05D004388 ORTHO05D005106 3.0e-50 201.8 123 85.4
Lsat_1_v5_gn_7_88020 Lactuca sativa HOM05D004388 ORTHO05D005106 1.5e-33 146.4 125 67.2
Oeu034076.1 Olea europaea HOM05D004388 ORTHO05D005106 7.4e-33 144.1 112 68.8
Migut.B00292 Erythranthe guttata HOM05D004388 ORTHO05D005106 9.7e-33 143.7 122 65.6
Hma1.2p1_0584F.1_g183220 Hydrangea macrophylla HOM05D004388 ORTHO05D005106 9.7e-33 143.7 123 64.2
ClCG02G005540 Citrullus lanatus HOM05D004388 ORTHO05D005106 2.2e-32 142.5 128 64.1
MELO3C018419.2 Cucumis melo HOM05D004388 ORTHO05D005106 4.8e-32 141.4 118 65.3
Cfa004944 Carpinus fangiana HOM05D004388 ORTHO05D005106 6.3e-32 141.0 122 63.1
Nn5g29406 Nelumbo nucifera HOM05D004388 ORTHO05D005106 6.3e-32 141.0 116 68.1
Hma1.2p1_1527F.1_g289065 Hydrangea macrophylla HOM05D004388 ORTHO05D005106 1.4e-31 139.8 122 65.6
Ca_12477_v3 Cicer arietinum L. HOM05D004388 ORTHO05D005106 1.8e-31 139.4 121 62.0
Peaxi162Scf00684g00563 Petunia axillaris HOM05D004388 ORTHO05D005106 2.4e-31 139.0 121 64.5
CSS0016442 Camellia sinensis var. sinensis HOM05D004388 ORTHO05D005106 4.1e-31 138.3 124 63.7
Gohir.D01G173000 Gossypium hirsutum HOM05D004388 ORTHO05D005106 4.1e-31 138.3 123 63.4
Thecc.02G028000 Theobroma cacao HOM05D004388 ORTHO05D005106 5.3e-31 137.9 123 65.0
HanXRQChr04g0128391 Helianthus annuus HOM05D004388 ORTHO05D005106 9.1e-31 137.1 123 62.6
Peaxi162Scf00016g01338 Petunia axillaris HOM05D004388 ORTHO05D005106 9.1e-31 137.1 114 67.5
EL10Ac1g01755 Beta vulgaris HOM05D004388 ORTHO05D005106 1.2e-30 136.7 117 66.7
CsaV3_7G010090 Cucumis sativus L. HOM05D004388 ORTHO05D005106 1.2e-30 136.7 118 63.6
Manes.15G145400 Manihot esculenta HOM05D004388 ORTHO05D005106 1.2e-30 136.7 126 63.5
ECA236G2461 Erigeron canadensis HOM05D004388 ORTHO05D005106 1.6e-30 136.3 124 63.7
TAR376G0986 Trochodendron aralioides HOM05D004388 ORTHO05D005106 1.6e-30 136.3 123 63.4
Gorai.002G214600 Gossypium raimondii HOM05D004388 ORTHO05D005106 2.0e-30 136.0 124 63.7
CSS0020304 Camellia sinensis var. sinensis HOM05D004388 ORTHO05D005106 2.6e-30 135.6 122 63.1
AUR62033874 Chenopodium quinoa HOM05D004388 ORTHO05D005106 3.5e-30 135.2 112 67.0
AUR62040093 Chenopodium quinoa HOM05D004388 ORTHO05D005106 3.5e-30 135.2 112 67.0
Gorai.005G264100 Gossypium raimondii HOM05D004388 ORTHO05D005106 3.5e-30 135.2 115 67.0
Eucgr.G01518 Eucalyptus grandis HOM05D004388 ORTHO05D005106 4.5e-30 134.8 124 61.3
FvH4_7g04430 Fragaria vesca HOM05D004388 ORTHO05D005106 4.5e-30 134.8 123 61.0
FAN06G3575 Fragaria x ananassa HOM05D004388 ORTHO05D005106 4.5e-30 134.8 123 61.0
QL03p018404 Quercus lobata HOM05D004388 ORTHO05D005106 4.5e-30 134.8 122 61.5
QL11p039202 Quercus lobata HOM05D004388 ORTHO05D005106 5.9e-30 134.4 122 61.5
COL.COLO4_26416 Corchorus olitorius HOM05D004388 ORTHO05D005106 7.7e-30 134.0 122 58.2
FAN06G4461 Fragaria x ananassa HOM05D004388 ORTHO05D005106 7.7e-30 134.0 123 61.0
Gohir.A03G214500 Gossypium hirsutum HOM05D004388 ORTHO05D005106 7.7e-30 134.0 115 65.2
CSS0032006 Camellia sinensis var. sinensis HOM05D004388 ORTHO05D005106 1.0e-29 133.7 105 67.6
Nn6g32144 Nelumbo nucifera HOM05D004388 ORTHO05D005106 1.0e-29 133.7 118 66.1
Nitab4.5_0001401g0180 Nicotiana tabacum HOM05D004388 ORTHO05D005106 1.0e-29 133.7 119 63.9
Cc02_g18220 Coffea canephora HOM05D004388 ORTHO05D005106 1.3e-29 133.3 123 65.0
Glyma.07G163600 Glycine max HOM05D004388 ORTHO05D005106 1.3e-29 133.3 125 59.2
Glyma.20G008600 Glycine max HOM05D004388 ORTHO05D005106 1.3e-29 133.3 127 61.4
RcHm_v2.0_Chr3g0487591 Rosa chinensis HOM05D004388 ORTHO05D005106 1.3e-29 133.3 125 59.2
TAR625G0696 Trochodendron aralioides HOM05D004388 ORTHO05D005106 1.3e-29 133.3 124 60.5
FAN03G2535 Fragaria x ananassa HOM05D004388 ORTHO05D005106 1.7e-29 132.9 122 61.5
Gohir.D02G236000 Gossypium hirsutum HOM05D004388 ORTHO05D005106 1.7e-29 132.9 126 63.5
CiPaw.05G058500 Carya illinoinensis HOM05D004388 ORTHO05D005106 2.2e-29 132.5 114 62.3
Gohir.A01G181900 Gossypium hirsutum HOM05D004388 ORTHO05D005106 2.2e-29 132.5 124 61.3
MSTRG.20123 Avicennia marina HOM05D004388 ORTHO05D005106 2.9e-29 132.1 107 62.6
CANSAT25G3863 Cannabis sativa HOM05D004388 ORTHO05D005106 2.9e-29 132.1 124 59.7
FAN10G0172 Fragaria x ananassa HOM05D004388 ORTHO05D005106 2.9e-29 132.1 123 61.0
CAN.G322.84 Capsicum annuum HOM05D004388 ORTHO05D005106 3.8e-29 131.7 113 62.8
FAN27G3490 Fragaria x ananassa HOM05D004388 ORTHO05D005106 3.8e-29 131.7 122 61.5
Duzib132G0841 Durio zibethinus HOM05D004388 ORTHO05D005106 5.0e-29 131.3 124 59.7
Nitab4.5_0008194g0060 Nicotiana tabacum HOM05D004388 ORTHO05D005106 5.0e-29 131.3 119 62.2
PGSC0003DMG400006208 Solanum tuberosum HOM05D004388 ORTHO05D005106 6.5e-29 131.0 123 60.2
GSVIVG01009587001 Vitis vinifera HOM05D004388 ORTHO05D005106 6.5e-29 131.0 123 57.7
Duzib248G0675 Durio zibethinus HOM05D004388 ORTHO05D005106 8.5e-29 130.6 113 64.6
FAN15G0910 Fragaria x ananassa HOM05D004388 ORTHO05D005106 8.5e-29 130.6 108 64.8
FvH4_2g07330 Fragaria vesca HOM05D004388 ORTHO05D005106 1.1e-28 130.2 122 59.8
FAN24G3543 Fragaria x ananassa HOM05D004388 ORTHO05D005106 1.1e-28 130.2 122 59.8
SalBow6G5992 Salvia bowleyana HOM05D004388 ORTHO05D005106 1.1e-28 130.2 113 63.7
Sopen10g022090 Solanum pennellii HOM05D004388 ORTHO05D005106 1.5e-28 129.8 124 61.3
BcaB01g03018 Brassica carinata HOM05D004388 ORTHO05D005106 1.9e-28 129.4 95 71.6
Sp4g07480 Schrenkiella parvula HOM05D004388 ORTHO05D005106 1.9e-28 129.4 127 59.8
Sc15g0006590 Simmondsia chinensis HOM05D004388 ORTHO05D005106 2.5e-28 129.0 127 58.3
Potri.004G147300 Populus trichocarpa HOM05D004388 ORTHO05D005106 3.2e-28 128.6 124 62.9
Potri.009G108700 Populus trichocarpa HOM05D004388 ORTHO05D005106 4.2e-28 128.3 124 61.3
FvH4_1g27200 Fragaria vesca HOM05D004388 ORTHO05D005106 5.5e-28 127.9 122 58.2
Ciclev10030439m.g Citrus clementina HOM05D004388 ORTHO05D005106 7.2e-28 127.5 124 58.9
Thhalv10001257m.g Eutrema salsugineum HOM05D004388 ORTHO05D005106 7.2e-28 127.5 127 58.3
FAN26G1198 Fragaria x ananassa HOM05D004388 ORTHO05D005106 7.2e-28 127.5 122 58.2
FAN28G0470 Fragaria x ananassa HOM05D004388 ORTHO05D005106 7.2e-28 127.5 122 58.2
Prupe.8G112900 Prunus persica HOM05D004388 ORTHO05D005106 7.2e-28 127.5 123 60.2
BcaC07g40816 Brassica carinata HOM05D004388 ORTHO05D005106 9.4e-28 127.1 127 59.8
A09p55160 Brassica napus HOM05D004388 ORTHO05D005106 9.4e-28 127.1 127 59.8
C08p38090 Brassica napus HOM05D004388 ORTHO05D005106 9.4e-28 127.1 127 59.8
BolC8t51384H Brassica oleracea HOM05D004388 ORTHO05D005106 9.4e-28 127.1 127 59.8
BraA09t40924Z Brassica rapa HOM05D004388 ORTHO05D005106 9.4e-28 127.1 127 59.8
AL4G19340 Arabidopsis lyrata HOM05D004388 ORTHO05D005106 1.2e-27 126.7 126 57.9
AT2G26500 Arabidopsis thaliana HOM05D004388 ORTHO05D005106 1.2e-27 126.7 126 57.9
Carub.0004s0666 Capsella rubella HOM05D004388 ORTHO05D005106 1.2e-27 126.7 126 57.9
Duzib052G1120 Durio zibethinus HOM05D004388 ORTHO05D005106 1.2e-27 126.7 124 59.7
Duzib248G1645 Durio zibethinus HOM05D004388 ORTHO05D005106 1.2e-27 126.7 127 59.1
Atru.BG.71.p Acer truncatum HOM05D004388 ORTHO05D005106 1.6e-27 126.3 94 69.1
Cpa.g.sc64.17 Carica papaya HOM05D004388 ORTHO05D005106 1.6e-27 126.3 117 63.2
Sed0011034 Sechium edule HOM05D004388 ORTHO05D005106 1.6e-27 126.3 125 59.2
FAN19G2330 Fragaria x ananassa HOM05D004388 ORTHO05D005106 2.1e-27 125.9 122 57.4
VMungo1309G1869 Vigna mungo HOM05D004388 ORTHO05D005106 2.7e-27 125.6 123 56.9
Aa31LG5G9370 Aethionema arabicum HOM05D004388 ORTHO05D005106 6.1e-27 124.4 127 59.1
Duzib248G0127 Durio zibethinus HOM05D004388 ORTHO05D005106 6.1e-27 124.4 115 61.7
FAN28G0922 Fragaria x ananassa HOM05D004388 ORTHO05D005106 6.1e-27 124.4 122 57.4
Medtr1g034260 Medicago truncatula HOM05D004388 ORTHO05D005106 8.0e-27 124.0 125 56.0
MD05G1072400 Malus domestica HOM05D004388 ORTHO05D005106 1.0e-26 123.6 110 60.9
PGR042G3241 Punica granatum HOM05D004388 ORTHO05D005106 1.0e-26 123.6 115 60.9
THA.LOC104803691 Tarenaya hassleriana HOM05D004388 ORTHO05D005106 1.0e-26 123.6 126 55.6
FAN23G2994 Fragaria x ananassa HOM05D004388 ORTHO05D005106 1.4e-26 123.2 122 56.6
Sabra09G0082900 Salix brachista HOM05D004388 ORTHO05D005106 1.4e-26 123.2 124 60.5
Sopen01g051240 Solanum pennellii HOM05D004388 ORTHO05D005106 1.4e-26 123.2 113 62.8
CARHR118500 Cardamine hirsuta HOM05D004388 ORTHO05D005106 1.8e-26 122.9 124 58.1
HanXRQChr16g0506081 Helianthus annuus HOM05D004388 ORTHO05D005106 1.8e-26 122.9 123 60.2
Aqoxy6G00936 Aquilegia oxysepala HOM05D004388 ORTHO05D005106 2.3e-26 122.5 121 60.3
COL.COLO4_17768 Corchorus olitorius HOM05D004388 ORTHO05D005106 2.3e-26 122.5 122 61.5
Dinv36015 Davidia involucrata HOM05D004388 ORTHO05D005106 2.3e-26 122.5 124 56.5
Lalb_Chr10g0095391 Lupinus albus HOM05D004388 ORTHO05D005106 2.3e-26 122.5 114 57.9
PSO170G0356 Papaver somniferum HOM05D004388 ORTHO05D005106 2.3e-26 122.5 127 59.1
Phvul.009G061900 Phaseolus vulgaris HOM05D004388 ORTHO05D005106 3.0e-26 122.1 123 56.1
Solyc01g109040.4 Solanum lycopersicum HOM05D004388 ORTHO05D005106 4.0e-26 121.7 113 62.8
PGSC0003DMG402025831 Solanum tuberosum HOM05D004388 ORTHO05D005106 5.2e-26 121.3 113 61.9
TWI56G1138 Tripterygium wilfordii HOM05D004388 ORTHO05D005106 5.2e-26 121.3 125 56.8
ATR0733G197 Amborella trichopoda HOM05D004388 ORTHO05D005106 6.7e-26 120.9 124 58.1
Ah.09g229630 Amaranthus hybridus HOM05D004388 ORTHO05D005106 8.8e-26 120.6 125 56.8
VMungo1215G1405 Vigna mungo HOM05D004388 ORTHO05D005106 1.1e-25 120.2 122 55.7
PSO541G0781 Papaver somniferum HOM05D004388 ORTHO05D005106 2.0e-25 119.4 109 60.6
Gorai.010G015700 Gossypium raimondii HOM05D004388 ORTHO05D005106 3.3e-25 118.6 113 54.0
MBI16_g31481_MAGBIO Magnolia biondii HOM05D004388 ORTHO05D005106 3.3e-25 118.6 125 52.8
MD10G1086700 Malus domestica HOM05D004388 ORTHO05D005106 3.3e-25 118.6 112 58.0
Phvul.003G011200 Phaseolus vulgaris HOM05D004388 ORTHO05D005106 4.4e-25 118.2 124 53.2
FAN20G1062 Fragaria x ananassa HOM05D004388 ORTHO05D005106 5.7e-25 117.9 93 66.7
Cfa018482 Carpinus fangiana HOM05D004388 ORTHO05D005106 7.5e-25 117.5 113 60.2
Glyma.06G035900 Glycine max HOM05D004388 ORTHO05D005106 7.5e-25 117.5 123 56.1
Lalb_Chr01g0003011 Lupinus albus HOM05D004388 ORTHO05D005106 7.5e-25 117.5 99 61.6
Glyma.04G035900 Glycine max HOM05D004388 ORTHO05D005106 9.7e-25 117.1 122 54.1
Lalb_Chr11g0062471 Lupinus albus HOM05D004388 ORTHO05D005106 2.2e-24 115.9 114 57.9
Psat6g097040 Pisum sativum HOM05D004388 ORTHO05D005106 3.7e-24 115.2 128 53.1
arahy.Tifrunner.gnm1.ann1.2I4SWN Arachis hypogaea HOM05D004388 ORTHO05D005106 1.4e-23 113.2 128 53.1
Manes.05G168800 Manihot esculenta HOM05D004388 ORTHO05D005106 1.4e-23 113.2 126 54.8
Thecc.08G017000 Theobroma cacao HOM05D004388 ORTHO05D005106 1.4e-23 113.2 126 54.8
CiPaw.16G051700 Carya illinoinensis HOM05D004388 ORTHO05D005106 2.4e-23 112.5 116 56.9
Lj1g0026402 Lotus japonicus HOM05D004388 ORTHO05D005106 4.1e-23 111.7 123 52.8
unitig_0.g849 Utricularia gibba HOM05D004388 ORTHO05D005106 9.1e-23 110.5 122 54.1
Potri.014G037000 Populus trichocarpa HOM05D004388 ORTHO05D005106 1.2e-22 110.2 125 53.6
unitig_21.g20762 Utricularia gibba HOM05D004388 ORTHO05D005106 2.0e-22 109.4 105 61.0
Sabra14G0026600 Salix brachista HOM05D004388 ORTHO05D005106 2.7e-22 109.0 126 53.2
TWI36G1636 Tripterygium wilfordii HOM05D004388 ORTHO05D005106 7.7e-22 107.5 132 53.0
SGA_v2.0_scaffold58G20597 Striga asiatica HOM05D004388 ORTHO05D005106 1.3e-21 106.7 111 53.2
TWI12G0249 Tripterygium wilfordii HOM05D004388 ORTHO05D005106 2.9e-21 105.5 127 54.3
arahy.Tifrunner.gnm1.ann1.RG9LRA Arachis hypogaea HOM05D004388 ORTHO05D005106 3.8e-21 105.1 100 56.0
Eucgr.I01216 Eucalyptus grandis HOM05D004388 ORTHO05D005106 5.0e-21 104.8 107 54.2
unitig_744.g24243 Utricularia gibba HOM05D004388 ORTHO05D005106 6.5e-21 104.4 108 55.6
HPP92_017776 Vanilla planifolia HOM05D004388 ORTHO05D005106 8.5e-21 104.0 129 51.2
Lalb_Chr08g0245721 Lupinus albus HOM05D004388 ORTHO05D005106 1.1e-20 103.6 126 54.8
arahy.Tifrunner.gnm1.ann1.ISKM3Z Arachis hypogaea HOM05D004388 ORTHO05D005106 1.6e-19 99.8 95 57.9
Os03g0765900 Oryza sativa ssp. japonica HOM05D004388 ORTHO05D005106 4.7e-19 98.2 120 47.5
Actinidia00479 Actinidia chinensis HOM05D000395 ORTHO05D005106 1.0e-18 97.1 127 47.2
Zm00001eb214080 Zea mays HOM05D004388 ORTHO05D005106 2.6e-17 92.4 115 48.7
Pp3c5_10730 Physcomitrium patens HOM05D004388 ORTHO05D005106 4.4e-17 91.7 113 47.8
Pp3c6_20300 Physcomitrium patens HOM05D004388 ORTHO05D005106 5.7e-17 91.3 125 41.6
Rhsim05G0079000 Rhododendron simsii HOM05D004388 ORTHO05D005106 2.2e-16 89.4 125 48.8
Zm00001eb058590 Zea mays HOM05D004388 ORTHO05D005106 6.3e-16 87.8 124 45.2
AagrBONN_evm.TU.Sc2ySwM_228.5818 Anthoceros agrestis HOM05D004388 ORTHO05D005106 9.1e-15 84.0 88 48.9
SMO361G0239 Selaginella moellendorffii HOM05D004388 ORTHO05D005106 2.7e-14 82.4 113 46.0
TPR.G40836 Trifolium pratense HOM05D004388 ORTHO05D005106 3.5e-14 82.0 73 61.6
BcaB08g35304 Brassica carinata HOM05D004388 ORTHO05D005106 1.7e-13 79.7 51 80.4
Psat4g068600 Pisum sativum HOM05D004388 ORTHO05D005106 3.8e-13 78.6 105 46.7
Mapoly0043s0110 Marchantia polymorpha HOM05D004388 ORTHO05D005106 6.5e-13 77.8 89 50.6
CBR_g48936 Chara braunii HOM05D004388 ORTHO05D005106 1.5e-12 76.6 128 39.8
CDE01G0191 Ceratophyllum demersum HOM05D004388 ORTHO05D005106 1.2e-11 73.6 52 69.2
Potri.002G130000 Populus trichocarpa HOM05D004388 ORTHO05D005106 1.2e-11 73.6 103 46.6
GSVIVG01031853001 Vitis vinifera HOM05D008110 ORTHO05D005106 2.7e-11 72.4 74 59.5
Oeu010570.1 Olea europaea HOM05D000395 ORTHO05D000088 1.8e-10 69.7 75 56.0
Psat3g122680 Pisum sativum HOM05D004388 ORTHO05D005106 6.3e-08 61.2 109 38.5


User provided reference genes

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