Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_UNG224680 Cucumis sativus L. HOM05D001245 ORTHO05D004475 5.8e-68 260.8 131 100.0
CsaV3_UNG224640 Cucumis sativus L. HOM05D001245 ORTHO05D004475 1.1e-66 256.5 131 99.2
MELO3C010511.2 Cucumis melo HOM05D001245 ORTHO05D004475 1.5e-44 183.0 101 91.1
CsaV3_1G017340 Cucumis sativus L. HOM05D001245 ORTHO05D004475 5.1e-40 167.9 85 96.5
ClCG11G015970 Citrullus lanatus HOM05D001245 ORTHO05D004475 1.1e-39 166.8 96 84.4
Sed0010713 Sechium edule HOM05D001245 ORTHO05D004475 1.4e-37 159.8 97 80.4
Manes.02G168200 Manihot esculenta HOM05D001245 ORTHO05D004475 1.9e-23 112.8 97 57.7
Cpa.g.sc64.150 Carica papaya HOM05D001245 ORTHO05D004475 3.3e-23 112.1 113 54.9
Dinv14685 Davidia involucrata HOM05D001245 ORTHO05D004475 4.8e-22 108.2 97 55.7
Ciclev10000159m.g Citrus clementina HOM05D001245 ORTHO05D004475 6.2e-22 107.8 112 54.5
Prupe.1G489800 Prunus persica HOM05D001245 ORTHO05D004475 8.1e-22 107.5 97 54.6
Thecc.08G132800 Theobroma cacao HOM05D001245 ORTHO05D004475 8.1e-22 107.5 97 57.7
Potri.005G182500 Populus trichocarpa HOM05D001245 ORTHO05D004475 1.1e-21 107.1 97 55.7
QL09p032547 Quercus lobata HOM05D001245 ORTHO05D004475 1.8e-21 106.3 112 51.8
Psat6g040520 Pisum sativum HOM05D001245 ORTHO05D004475 4.0e-21 105.1 97 51.5
FAN20G0097 Fragaria x ananassa HOM05D001245 ORTHO05D004475 6.9e-21 104.4 96 56.2
TPR.G30550 Trifolium pratense HOM05D001245 ORTHO05D004475 6.9e-21 104.4 97 52.6
Atru.chr13.1560 Acer truncatum HOM05D001245 ORTHO05D004475 9.0e-21 104.0 97 53.6
Sabra05G0138300 Salix brachista HOM05D001245 ORTHO05D004475 9.0e-21 104.0 97 53.6
FvH4_2g27821 Fragaria vesca HOM05D001245 ORTHO05D004475 1.5e-20 103.2 97 55.7
Lalb_Chr17g0343591 Lupinus albus HOM05D001245 ORTHO05D004475 1.5e-20 103.2 96 52.1
FAN15G0291 Fragaria x ananassa HOM05D001245 ORTHO05D005230 2.0e-20 102.8 97 55.7
RcHm_v2.0_Chr6g0296681 Rosa chinensis HOM05D001245 ORTHO05D004475 2.0e-20 102.8 97 53.6
TWI34G1866 Tripterygium wilfordii HOM05D001245 ORTHO05D004475 2.0e-20 102.8 97 53.6
Lj1g0014366 Lotus japonicus HOM05D001245 ORTHO05D004475 2.6e-20 102.4 121 46.3
Actinidia03424 Actinidia chinensis HOM05D001245 ORTHO05D004475 1.0e-19 100.5 97 52.6
Duzib093G0162 Durio zibethinus HOM05D001245 ORTHO05D004475 1.0e-19 100.5 97 54.6
FAN24G2504 Fragaria x ananassa HOM05D001245 ORTHO05D005230 1.7e-19 99.8 97 54.6
Rhsim11G0071500 Rhododendron simsii HOM05D001245 ORTHO05D004475 2.9e-19 99.0 97 51.5
Lj4C682G10 Lonicera japonica HOM05D001245 ORTHO05D004475 6.5e-19 97.8 97 54.6
Medtr1g029630 Medicago truncatula HOM05D001245 ORTHO05D004475 6.5e-19 97.8 97 49.5
MD08G1159000 Malus domestica HOM05D001245 ORTHO05D004475 1.1e-18 97.1 100 50.0
COL.COLO4_08845 Corchorus olitorius HOM05D001245 ORTHO05D004475 1.4e-18 96.7 97 53.6
MBI06_g35213_MAGBIO Magnolia biondii HOM05D001245 ORTHO05D004475 1.4e-18 96.7 97 53.6
PGR042G0290 Punica granatum HOM05D001245 ORTHO05D004475 1.4e-18 96.7 99 49.5
CSS0013013 Camellia sinensis var. sinensis HOM05D001245 ORTHO05D004475 1.9e-18 96.3 97 50.5
CSS0038833 Camellia sinensis var. sinensis HOM05D001245 ORTHO05D004475 1.9e-18 96.3 97 50.5
arahy.Tifrunner.gnm1.ann1.TXAW3L Arachis hypogaea HOM05D001245 ORTHO05D004475 2.5e-18 95.9 96 47.9
TAR229G0002 Trochodendron aralioides HOM05D001245 ORTHO05D004475 2.5e-18 95.9 98 51.0
Gorai.013G107700 Gossypium raimondii HOM05D001245 ORTHO05D004475 3.2e-18 95.5 97 51.5
Gohir.D03G069003 Gossypium hirsutum HOM05D001245 ORTHO05D004475 4.2e-18 95.1 97 51.5
Hma1.2p1_0014F.1_g010210 Hydrangea macrophylla HOM05D001245 ORTHO05D004475 4.2e-18 95.1 97 51.5
arahy.Tifrunner.gnm1.ann1.69Q1HU Arachis hypogaea HOM05D001245 ORTHO05D004475 5.5e-18 94.7 96 47.9
CANSAT25G1503 Cannabis sativa HOM05D001245 ORTHO05D004475 5.5e-18 94.7 116 48.3
Ca_12648_v3 Cicer arietinum L. HOM05D001245 ORTHO05D005230 5.5e-18 94.7 98 50.0
Glyma.16G005600 Glycine max HOM05D001245 ORTHO05D004475 5.5e-18 94.7 96 51.0
CiPaw.16G022900 Carya illinoinensis HOM05D001245 ORTHO05D004475 9.3e-18 94.0 97 50.5
Cfa018127 Carpinus fangiana HOM05D001245 ORTHO05D004475 2.7e-17 92.4 115 45.2
Gohir.A02G110400 Gossypium hirsutum HOM05D001245 ORTHO05D004475 2.7e-17 92.4 97 51.5
FAN27G0075 Fragaria x ananassa HOM05D001245 ORTHO05D005230 1.8e-16 89.7 97 51.5
VMungo0647G1057 Vigna mungo HOM05D001245 ORTHO05D004475 1.8e-16 89.7 96 49.0
Eucgr.F03841 Eucalyptus grandis HOM05D001245 ORTHO05D004475 3.0e-16 89.0 97 46.4
Nn1g08963 Nelumbo nucifera HOM05D001245 ORTHO05D004475 6.7e-16 87.8 98 48.0
PSO170G6194 Papaver somniferum HOM05D001245 ORTHO05D004475 8.7e-16 87.4 100 47.0
Phvul.001G070600 Phaseolus vulgaris HOM05D001245 ORTHO05D004475 8.7e-16 87.4 85 51.8
GSVIVG01008809001 Vitis vinifera HOM05D001245 ORTHO05D004475 8.7e-16 87.4 83 49.4
SGA_v2.0_scaffold354G49742 Striga asiatica HOM05D001245 ORTHO05D004475 1.1e-15 87.0 111 43.2
PSO528G0248 Papaver somniferum HOM05D001245 ORTHO05D004475 1.5e-15 86.7 100 46.0
CANSAT80G2764 Cannabis sativa HOM05D001245 ORTHO05D004475 3.3e-15 85.5 98 49.0
SalBow6G4599 Salvia bowleyana HOM05D001245 ORTHO05D004475 4.3e-15 85.1 96 45.8
ECA233G0473 Erigeron canadensis HOM05D001245 ORTHO05D004475 5.7e-15 84.7 97 43.3
Migut.N01819 Erythranthe guttata HOM05D001245 ORTHO05D004475 7.4e-15 84.3 86 43.0
HanXRQChr02g0040561 Helianthus annuus HOM05D001245 ORTHO05D004475 9.6e-15 84.0 98 43.9
ATR0561G228 Amborella trichopoda HOM05D001245 ORTHO05D004475 1.3e-14 83.6 123 36.6
Cc02_g29380 Coffea canephora HOM05D001245 ORTHO05D004475 1.3e-14 83.6 84 51.2
Phvul.002G078200 Phaseolus vulgaris HOM05D001245 ORTHO05D004475 1.3e-14 83.6 96 44.8
Medtr7g090980 Medicago truncatula HOM05D001245 ORTHO05D004475 1.6e-14 83.2 97 43.3
Oeu009633.1 Olea europaea HOM05D001245 ORTHO05D004475 1.6e-14 83.2 111 39.6
THA.LOC104800232 Tarenaya hassleriana HOM05D001245 ORTHO05D004475 1.6e-14 83.2 97 48.5
THA.LOC104810225 Tarenaya hassleriana HOM05D001245 ORTHO05D004475 1.6e-14 83.2 96 46.9
AL2G37520 Arabidopsis lyrata HOM05D001245 ORTHO05D004475 2.1e-14 82.8 99 44.4
Thhalv10018076m.g Eutrema salsugineum HOM05D001245 ORTHO05D004475 2.1e-14 82.8 99 42.4
AT1G77320 Arabidopsis thaliana HOM05D001245 ORTHO05D004475 3.7e-14 82.0 62 58.1
Carub.0002s2420 Capsella rubella HOM05D001245 ORTHO05D004475 4.8e-14 81.6 99 43.4
DCAR_003586 Daucus carota HOM05D001245 ORTHO05D005230 4.8e-14 81.6 97 43.3
CARHR070810 Cardamine hirsuta HOM05D001245 ORTHO05D004475 1.1e-13 80.5 61 57.4
Peaxi162Scf00087g00021 Petunia axillaris HOM05D001245 ORTHO05D004475 1.4e-13 80.1 141 35.5
Sc26g0002950 Simmondsia chinensis HOM05D001245 ORTHO05D004475 1.8e-13 79.7 122 39.3
Aa31LG4G7350 Aethionema arabicum HOM05D001245 ORTHO05D004475 2.4e-13 79.3 99 45.5
SEGI_34477 Sequoiadendron giganteum HOM05D001245 ORTHO05D004475 4.1e-13 78.6 113 42.5
Solyc01g068260.4 Solanum lycopersicum HOM05D001245 ORTHO05D004475 5.3e-13 78.2 79 46.8
Sopen01g030190 Solanum pennellii HOM05D001245 ORTHO05D004475 5.3e-13 78.2 79 46.8
Sp5g32500 Schrenkiella parvula HOM05D001245 ORTHO05D004475 6.9e-13 77.8 62 53.2
Nitab4.5_0000316g0190 Nicotiana tabacum HOM05D001245 ORTHO05D004475 9.0e-13 77.4 79 45.6
BcaC08g47618 Brassica carinata HOM05D001245 ORTHO05D004475 1.2e-12 77.0 62 51.6
A07p42860 Brassica napus HOM05D001245 ORTHO05D004475 1.2e-12 77.0 62 51.6
C06p51480 Brassica napus HOM05D001245 ORTHO05D004475 1.2e-12 77.0 62 51.6
BolC6t40166H Brassica oleracea HOM05D001245 ORTHO05D004475 1.2e-12 77.0 62 51.6
BraA07t31807Z Brassica rapa HOM05D001245 ORTHO05D004475 1.2e-12 77.0 62 51.6
Nitab4.5_0001543g0060 Nicotiana tabacum HOM05D001245 ORTHO05D004475 1.5e-12 76.6 79 45.6
Ah.05g169150 Amaranthus hybridus HOM05D001245 ORTHO05D004475 2.6e-12 75.9 111 39.6
Hund26774 Selenicereus undatus HOM05D001245 ORTHO05D004475 3.4e-12 75.5 123 36.6
EL10Ac1g01344 Beta vulgaris HOM05D001245 ORTHO05D004475 3.8e-11 72.0 112 35.7
SHI09212 Sapria himalayana HOM05D000105 ORTHO05D000023 5.0e-11 71.6 81 50.6
Zm00001eb091010 Zea mays HOM05D001245 ORTHO05D004475 5.0e-11 71.6 98 39.8
vmacro10605 Vaccinium macrocarpon HOM05D001245 ORTHO05D004475 6.5e-11 71.2 80 46.2
Aqoxy6G00310 Aquilegia oxysepala HOM05D001245 ORTHO05D004475 7.2e-10 67.8 98 40.8
HPP92_002227 Vanilla planifolia HOM05D001245 ORTHO05D004475 2.1e-09 66.2 48 62.5
AUR62013424 Chenopodium quinoa HOM05D001245 ORTHO05D004475 1.8e-08 63.2 96 35.4
Lsat_1_v5_gn_1_6740 Lactuca sativa HOM05D001245 ORTHO05D004475 1.8e-08 63.2 91 40.7
unitig_21.g20280 Utricularia gibba HOM05D001245 ORTHO05D004475 1.8e-08 63.2 72 44.4
AUR62007718 Chenopodium quinoa HOM05D001245 ORTHO05D004475 5.1e-08 61.6 56 48.2
Pp3c3_700 Physcomitrium patens HOM05D001245 ORTHO05D004475 1.1e-07 60.5 48 52.1
Mapoly0158s0032 Marchantia polymorpha HOM05D001245 ORTHO05D004475 1.9e-07 59.7 54 50.0
CBR_g37446 Chara braunii HOM05D001245 ORTHO05D004475 9.7e-07 57.4 46 52.2


User provided reference genes

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