Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_UNG208000 Cucumis sativus L. HOM05D007877 ORTHO05D009957 2.9e-285 984.6 496 100.0
CANSAT16G0008 Cannabis sativa HOM05D007877 ORTHO05D009957 7.4e-132 474.9 259 92.7
RcHm_v2.0_MTg0499111 Rosa chinensis HOM05D007877 ORTHO05D009957 4.8e-131 472.2 274 88.3
Solyc00g500168.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 4.8e-131 472.2 261 90.8
Solyc00g500346.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 4.8e-131 472.2 261 90.8
Solyc00g500357.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 4.8e-131 472.2 261 90.8
CARHR282940 Cardamine hirsuta HOM05D007877 ORTHO05D009957 1.6e-126 457.2 260 88.5
ATMG00570 Arabidopsis thaliana HOM05D007877 ORTHO05D009957 7.4e-124 448.4 260 87.3
Lj2P1225T96 Lonicera japonica HOM05D007877 ORTHO05D009957 9.6e-124 448.0 252 90.1
Aa31csc239G30 Aethionema arabicum HOM05D007877 ORTHO05D009957 4.5e-121 439.1 256 86.7
Lalb_Chr00c29g0408181 Lupinus albus HOM05D007877 ORTHO05D009957 1.9e-119 433.7 243 90.1
Lalb_Chr22g0358751 Lupinus albus HOM05D007877 ORTHO05D009957 1.9e-119 433.7 243 90.1
Zm00001eb436210 Zea mays HOM05D007877 ORTHO05D009957 6.7e-117 425.2 248 87.1
Zm00001eb436260 Zea mays HOM05D007877 ORTHO05D009957 6.7e-117 425.2 248 87.1
Zm00001eb436450 Zea mays HOM05D007877 ORTHO05D009957 6.7e-117 425.2 248 87.1
Zm00001eb436490 Zea mays HOM05D007877 ORTHO05D009957 6.7e-117 425.2 248 87.1
Zm00001eb441030 Zea mays HOM05D007877 ORTHO05D009957 6.7e-117 425.2 248 87.1
TPR.G17000 Trifolium pratense HOM05D007877 ORTHO05D009957 1.9e-116 423.7 235 91.1
HanXRQChr00c0055g0571431 Helianthus annuus HOM05D007877 ORTHO05D009957 4.3e-116 422.5 240 90.4
HanXRQMTg0579501 Helianthus annuus HOM05D007877 ORTHO05D009957 4.3e-116 422.5 240 90.4
DCAR_032450 Daucus carota HOM05D007877 ORTHO05D009957 2.0e-113 413.7 229 90.8
LjContig00315g0025322 Lotus japonicus HOM05D007877 ORTHO05D009957 4.5e-113 412.5 250 85.2
Gohir.A01G022475 Gossypium hirsutum HOM05D007877 ORTHO05D009957 4.6e-102 375.9 209 90.9
Gorai.001G166700 Gossypium raimondii HOM05D007877 ORTHO05D009957 8.8e-101 371.7 237 82.7
Thhalv10015628m.g Eutrema salsugineum HOM05D007877 ORTHO05D009957 1.4e-93 347.8 237 78.5
HanXRQChr00c0234g0572751 Helianthus annuus HOM05D007877 ORTHO05D009957 1.7e-88 330.9 186 90.3
PSO541G3164 Papaver somniferum HOM05D007877 ORTHO05D009957 3.5e-81 306.6 234 67.1
SHI55214 Sapria himalayana HOM05D007877 ORTHO05D009957 7.7e-81 305.4 211 75.8
PSO133G0099 Papaver somniferum HOM05D007877 ORTHO05D009957 2.9e-80 303.5 234 67.1
PSO384G0556 Papaver somniferum HOM05D007877 ORTHO05D009957 1.1e-79 301.6 234 66.7
Peaxi162Scf00508g00001 Petunia axillaris HOM05D007877 ORTHO05D009957 9.1e-74 282.0 232 70.7
SEGI_02417 Sequoiadendron giganteum HOM05D007877 ORTHO05D009957 1.5e-68 264.6 217 67.7
Solyc00g500237.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 1.1e-63 248.4 261 57.5
Nitab4.5_0000172g2240 Nicotiana tabacum HOM05D007877 ORTHO05D009957 6.1e-62 242.7 149 83.2
arahy.Tifrunner.gnm1.ann1.SK2G41 Arachis hypogaea HOM05D007877 ORTHO05D009957 1.5e-60 238.0 143 86.7
Nitab4.5_0009703g0110 Nicotiana tabacum HOM05D007877 ORTHO05D009957 5.7e-60 236.1 187 69.5
AUR62042354 Chenopodium quinoa HOM05D000743 ORTHO05D000580 9.2e-58 228.8 238 57.1
AUR62043788 Chenopodium quinoa HOM05D000743 ORTHO05D000580 9.2e-58 228.8 238 57.1
C04p19590 Brassica napus HOM05D007877 ORTHO05D009957 1.6e-54 218.0 124 90.3
HanXRQChr01g0007101 Helianthus annuus HOM05D007877 ORTHO05D009957 5.2e-53 213.0 131 80.9
Phvul.005G124700 Phaseolus vulgaris HOM05D007877 ORTHO05D009957 1.9e-50 204.5 158 73.4
BolC4t23493H Brassica oleracea HOM05D007877 ORTHO05D009957 3.0e-48 197.2 113 91.2
CAN.G1159.16 Capsicum annuum HOM05D007877 ORTHO05D009957 1.9e-47 194.5 129 81.4
Lsat_1_v5_gn_2_125060 Lactuca sativa HOM05D007877 ORTHO05D009957 1.9e-47 194.5 113 90.3
BraSC177t45764Z Brassica rapa HOM05D007877 ORTHO05D009957 1.3e-43 181.8 104 91.3
BraSC48t46272Z Brassica rapa HOM05D007877 ORTHO05D009957 1.3e-43 181.8 104 91.3
Lsat_1_v5_gn_9_49261 Lactuca sativa HOM05D007877 ORTHO05D009957 3.7e-43 180.3 107 89.7
MD15G1309600 Malus domestica HOM05D007877 ORTHO05D009957 3.7e-43 180.3 110 80.9
Solyc12g035750.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 1.9e-42 177.9 135 69.6
TAR371G0168 Trochodendron aralioides HOM05D007877 ORTHO05D009957 1.6e-41 174.9 104 89.4
Aqoxy12s004 Aquilegia oxysepala HOM05D007877 ORTHO05D009957 1.6e-38 164.9 104 85.6
Aqoxy38s004 Aquilegia oxysepala HOM05D007877 ORTHO05D009957 1.6e-38 164.9 104 85.6
Aqoxy1G02979 Aquilegia oxysepala HOM05D007877 ORTHO05D009957 1.1e-37 162.2 104 84.6
Psat0s1774g0160 Pisum sativum HOM05D007877 ORTHO05D009957 1.6e-33 148.3 98 82.7
unitig_87.g27972 Utricularia gibba HOM05D007877 ORTHO05D009957 4.6e-33 146.7 92 85.9
SEGI_25147 Sequoiadendron giganteum HOM05D007877 ORTHO05D009957 6.0e-33 146.4 116 70.7
AUR62043917 Chenopodium quinoa HOM05D000743 ORTHO05D000580 1.1e-31 142.1 186 48.4
AUR62026822 Chenopodium quinoa HOM05D000743 ORTHO05D000580 1.2e-30 138.7 87 83.9
Glyma.U026900 Glycine max HOM05D007877 ORTHO05D009957 3.1e-29 134.0 222 41.4
Nitab4.5_0015438g0010 Nicotiana tabacum HOM05D007877 ORTHO05D009957 4.4e-28 130.2 68 89.7
Solyc05g023960.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 1.7e-27 128.3 86 72.1
RhsimMtG0001700 Rhododendron simsii HOM05D007877 ORTHO05D009957 3.8e-27 127.1 119 62.2
RhsimMtG0004900 Rhododendron simsii HOM05D007877 ORTHO05D009957 3.8e-27 127.1 119 62.2
Solyc10g062060.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 3.8e-27 127.1 83 75.9
CARHR288300 Cardamine hirsuta HOM05D007877 ORTHO05D009957 6.4e-27 126.3 69 94.2
BraSC77t46652Z Brassica rapa HOM05D007877 ORTHO05D009957 9.3e-26 122.5 74 87.8
EL10Ac8g19721 Beta vulgaris HOM05D007877 ORTHO05D009957 4.6e-25 120.2 95 70.5
BcaC05g26882 Brassica carinata HOM05D003467 ORTHO05D004220 3.0e-24 117.5 111 62.2
Ca_17162_v3 Cicer arietinum L. HOM05D000743 ORTHO05D000580 3.9e-24 117.1 71 87.3
Nitab4.5_0004471g0150 Nicotiana tabacum HOM05D007877 ORTHO05D009957 3.9e-24 117.1 92 71.7
Ca_26709_v3 Cicer arietinum L. HOM05D010881 ORTHO05D026827 1.9e-23 114.8 61 91.8
SHI48166 Sapria himalayana HOM05D007877 ORTHO05D009957 1.4e-21 108.6 186 41.4
Solyc05g023970.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 1.4e-21 108.6 113 61.1
SHI32359 Sapria himalayana HOM05D007877 ORTHO05D009957 5.3e-21 106.7 103 56.3
Solyc10g062070.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 9.0e-21 105.9 77 71.4
CAN.G628.86 Capsicum annuum HOM05D007877 ORTHO05D009957 2.6e-20 104.4 56 89.3
Psat0s552g0160 Pisum sativum HOM05D007877 ORTHO05D009957 1.9e-18 98.2 62 79.0
Solyc04g049250.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 5.4e-18 96.7 113 54.0
C09p31620 Brassica napus HOM05D007877 ORTHO05D009957 5.1e-16 90.1 53 83.0
Nitab4.5_0000010g0230 Nicotiana tabacum HOM05D007877 ORTHO05D009957 1.1e-15 89.0 71 70.4
BcaC05g26874 Brassica carinata HOM05D003467 ORTHO05D004220 2.5e-15 87.8 96 55.2
Nn1g10077 Nelumbo nucifera HOM05D007877 ORTHO05D009957 2.8e-14 84.3 51 84.3
Nn1g10099 Nelumbo nucifera HOM05D007877 ORTHO05D009957 2.8e-14 84.3 51 84.3
Peaxi162Scf00931g00018 Petunia axillaris HOM05D007877 ORTHO05D009957 6.9e-13 79.7 44 90.9
BolC6t36215H Brassica oleracea HOM05D007877 ORTHO05D009957 1.7e-11 75.1 51 74.5
SHI24736 Sapria himalayana HOM05D007877 ORTHO05D009957 8.4e-11 72.8 75 54.7
SalBow1G2595 Salvia bowleyana HOM05D009805 ORTHO05D010994 1.9e-07 61.6 46 69.6


User provided reference genes

Program Settings