Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_UNG207890 Cucumis sativus L. HOM05D004909 ORTHO05D009625 2.3e-212 741.9 361 100.0
PGR044G1103 Punica granatum HOM05D004909 ORTHO05D009625 1.4e-108 397.1 482 50.2
PGR004G1782 Punica granatum HOM05D004909 ORTHO05D009625 1.9e-76 290.4 366 49.5
Aqoxy2G02242 Aquilegia oxysepala HOM05D004909 ORTHO05D009625 3.3e-57 226.5 171 67.3
Aqoxy3G01129 Aquilegia oxysepala HOM05D004909 ORTHO05D009625 5.9e-54 215.7 166 66.3
SEGI_22240 Sequoiadendron giganteum HOM05D004909 ORTHO05D009316 5.0e-53 212.6 386 38.3
CAN.G1001.42 Capsicum annuum HOM05D004909 ORTHO05D009625 2.2e-48 197.2 146 68.5
Actinidia34900 Actinidia chinensis HOM05D004909 ORTHO05D009316 2.6e-46 190.3 440 33.4
Aqoxy2G02243 Aquilegia oxysepala HOM05D004909 ORTHO05D009625 2.9e-45 186.8 153 64.1
Aqoxy3G01128 Aquilegia oxysepala HOM05D004909 ORTHO05D009625 2.9e-45 186.8 153 64.1
Oeu050987.1 Olea europaea HOM05D004909 ORTHO05D009625 1.7e-40 171.0 266 40.2
DCAR_032461 Daucus carota HOM05D004909 ORTHO05D009625 1.7e-37 161.0 502 29.7
CAN.G335.18 Capsicum annuum HOM05D004909 ORTHO05D009625 1.0e-34 151.8 131 61.1
PSO063G2824 Papaver somniferum HOM05D004909 ORTHO05D009625 6.7e-34 149.1 400 30.5
Oeu050988.1 Olea europaea HOM05D004909 ORTHO05D009625 1.1e-33 148.3 169 48.5
RcHm_v2.0_Chr6g0256711 Rosa chinensis HOM05D004909 ORTHO05D009625 8.2e-32 142.1 455 28.4
Sc11g0004480 Simmondsia chinensis HOM05D004909 ORTHO05D009625 3.1e-31 140.2 195 45.1
EL10Ac7g16727 Beta vulgaris HOM05D004909 ORTHO05D009625 4.5e-30 136.3 495 28.9
Cc00_g11440 Coffea canephora HOM05D004909 ORTHO05D009625 3.2e-28 130.2 198 41.4
Sed0005050 Sechium edule HOM05D004909 ORTHO05D009316 8.0e-27 125.6 429 28.4
SHI49389 Sapria himalayana HOM05D004909 ORTHO05D009625 7.5e-25 119.0 179 39.1
SHI38062 Sapria himalayana HOM05D004909 ORTHO05D009625 4.8e-24 116.3 216 34.7
SHI49457 Sapria himalayana HOM05D004909 ORTHO05D009625 4.1e-23 113.2 163 39.9
SHI46715 Sapria himalayana HOM05D004909 ORTHO05D009625 9.1e-23 112.1 201 36.8
SHI35986 Sapria himalayana HOM05D004909 ORTHO05D009625 7.7e-22 109.0 167 38.9
EL10Ac1g02203 Beta vulgaris HOM05D004909 ORTHO05D009625 3.8e-21 106.7 174 43.1
Hma1.2p1_0295F.1_g116730 Hydrangea macrophylla HOM05D004909 ORTHO05D009625 1.1e-20 105.1 124 49.2
Sc14g0003260 Simmondsia chinensis HOM05D004909 ORTHO05D009625 2.5e-20 104.0 322 30.1
VMungo1067G0003 Vigna mungo HOM05D004909 ORTHO05D009625 3.2e-20 103.6 503 25.8
Cc00_g01880 Coffea canephora HOM05D004909 ORTHO05D009625 4.7e-19 99.8 164 40.9
AUR62042351 Chenopodium quinoa HOM05D004909 ORTHO05D009316 6.1e-19 99.4 253 32.8
SHI41761 Sapria himalayana HOM05D004909 ORTHO05D009625 1.4e-18 98.2 132 42.4
AUR62044036 Chenopodium quinoa HOM05D004909 ORTHO05D009625 3.0e-18 97.1 253 32.4
SHI40430 Sapria himalayana HOM05D004909 ORTHO05D009625 3.4e-17 93.6 226 31.9
AUR62010529 Chenopodium quinoa HOM05D004909 ORTHO05D005619 8.3e-16 89.0 185 34.6
SGA_v2.0_scaffold119G32792 Striga asiatica HOM05D004909 ORTHO05D009625 1.1e-15 88.6 132 40.9
Solyc05g045720.1 Solanum lycopersicum HOM05D004909 ORTHO05D009625 1.0e-13 82.0 235 28.1
SHI43987 Sapria himalayana HOM05D004909 ORTHO05D009625 3.6e-11 73.6 101 40.6
SGA_v2.0_scaffold255G45542 Striga asiatica HOM05D004909 ORTHO05D009625 1.0e-10 72.0 49 65.3
Nitab4.5_0005140g0040 Nicotiana tabacum HOM05D004909 ORTHO05D009625 2.3e-10 70.9 176 32.4
Nitab4.5_0000081g0150 Nicotiana tabacum HOM05D004909 ORTHO05D009625 1.5e-09 68.2 255 26.3
Nitab4.5_0000014g0460 Nicotiana tabacum HOM05D004909 ORTHO05D009625 3.4e-09 67.0 155 33.5
EL10Ac1g02202 Beta vulgaris HOM05D004909 ORTHO05D009625 6.3e-08 62.8 62 46.8
EL10Ac1g01430 Beta vulgaris HOM05D004909 ORTHO05D009625 5.4e-07 59.7 172 30.8


User provided reference genes

Program Settings