Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_7G035160 Cucumis sativus L. HOM05D008383 ORTHO05D010186 2.1e-33 145.2 78 100.0
ClCG09G000350 Citrullus lanatus HOM05D008383 ORTHO05D010186 1.5e-26 122.5 78 79.5
Sed0020534 Sechium edule HOM05D008383 ORTHO05D010186 3.1e-21 104.8 78 71.8
Sed0013242 Sechium edule HOM05D008383 ORTHO05D010186 1.2e-17 92.8 74 67.6
Dinv30420 Davidia involucrata HOM05D008383 ORTHO05D010186 4.9e-14 80.9 70 60.0
CiPaw.02G144300 Carya illinoinensis HOM05D008383 ORTHO05D010186 5.0e-11 70.9 71 52.1
MD17G1179900 Malus domestica HOM05D008383 ORTHO05D010186 3.3e-10 68.2 71 52.1
CiPaw.01G229300 Carya illinoinensis HOM05D008383 ORTHO05D010186 5.6e-10 67.4 71 50.7
Migut.I00966 Erythranthe guttata HOM05D008383 ORTHO05D010186 9.5e-10 66.6 73 53.4
RcHm_v2.0_Chr2g0141731 Rosa chinensis HOM05D008383 ORTHO05D010186 9.5e-10 66.6 66 54.5
Potri.003G061200 Populus trichocarpa HOM05D008383 ORTHO05D010186 3.6e-09 64.7 72 52.8
Rhsim12G0204000 Rhododendron simsii HOM05D008383 ORTHO05D010186 6.2e-09 63.9 71 50.7
Medtr2g100440 Medicago truncatula HOM05D008383 ORTHO05D010186 1.0e-08 63.2 71 53.5
Haze_15886 Corylus avellana HOM05D008383 ORTHO05D010186 1.4e-08 62.8 72 50.0
Haze_15884 Corylus avellana HOM05D008383 ORTHO05D010186 1.8e-08 62.4 72 50.0
Rhsim12G0203900 Rhododendron simsii HOM05D008383 ORTHO05D010186 1.8e-08 62.4 71 49.3
THA.LOC104810546 Tarenaya hassleriana HOM05D012542 ORTHO05D010186 1.8e-08 62.4 73 46.6
Haze_15885 Corylus avellana HOM05D008383 ORTHO05D010186 2.3e-08 62.0 72 50.0
Potri.003G061000 Populus trichocarpa HOM05D008383 ORTHO05D010186 2.3e-08 62.0 62 51.6
Potri.001G172850 Populus trichocarpa HOM05D008383 ORTHO05D010186 4.0e-08 61.2 74 51.4
Aa31LG10G2880 Aethionema arabicum HOM05D012542 ORTHO05D010186 6.8e-08 60.5 66 50.0
AL1G59964 Arabidopsis lyrata HOM05D012542 ORTHO05D010186 2.0e-07 58.9 67 50.7
Nn8g38998 Nelumbo nucifera HOM05D008383 ORTHO05D010186 2.0e-07 58.9 66 50.0
FAN02G1950 Fragaria x ananassa HOM05D008383 ORTHO05D010186 3.4e-07 58.2 71 50.7
FAN05G1942 Fragaria x ananassa HOM05D008383 ORTHO05D010186 3.4e-07 58.2 71 50.7
Carub.0001s4085 Capsella rubella HOM05D012542 ORTHO05D010186 4.4e-07 57.8 71 43.7
CiPaw.01G228700 Carya illinoinensis HOM05D008383 ORTHO05D010186 4.4e-07 57.8 61 50.8
Oeu026725.1 Olea europaea HOM05D008383 ORTHO05D010186 5.8e-07 57.4 68 51.5
FvH4_6g32710 Fragaria vesca HOM05D008383 ORTHO05D010186 7.5e-07 57.0 71 49.3
Haze_15879 Corylus avellana HOM05D008383 ORTHO05D010186 9.8e-07 56.6 73 50.7
Sabra03G0035400 Salix brachista HOM05D008383 ORTHO05D010186 9.8e-07 56.6 72 48.6
AT1G51920 Arabidopsis thaliana HOM05D012542 ORTHO05D010186 4.9e-06 54.3 69 47.8
Thecc.06G103000 Theobroma cacao HOM05D008383 ORTHO05D010186 6.4e-06 53.9 70 50.0


User provided reference genes

Program Settings