Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_7G034520 Cucumis sativus L. HOM05D006979 ORTHO05D008857 3.3e-167 591.7 304 100.0
Sed0019772 Sechium edule HOM05D006979 ORTHO05D008857 8.2e-142 507.3 304 85.2
ClCG09G000940 Citrullus lanatus HOM05D006979 ORTHO05D008857 8.5e-139 497.3 350 76.6
Potri.003G063800 Populus trichocarpa HOM05D006979 ORTHO05D008857 6.8e-104 381.3 279 68.5
Prupe.3G042700 Prunus persica HOM05D006979 ORTHO05D008857 5.4e-101 371.7 282 65.6
Sabra03G0037400 Salix brachista HOM05D006979 ORTHO05D008857 5.4e-101 371.7 285 67.0
Cfa003539 Carpinus fangiana HOM05D006979 ORTHO05D008857 3.5e-100 369.0 280 68.2
MD09G1184500 Malus domestica HOM05D006979 ORTHO05D008857 3.5e-100 369.0 303 64.0
CANSAT56G2284 Cannabis sativa HOM05D006979 ORTHO05D008857 5.9e-100 368.2 282 67.4
Manes.11G021300 Manihot esculenta HOM05D006979 ORTHO05D008857 2.3e-99 366.3 279 66.7
Atru.chr1.3953 Acer truncatum HOM05D006979 ORTHO05D008857 8.6e-99 364.4 299 63.2
FvH4_6g34590 Fragaria vesca HOM05D006979 ORTHO05D008857 8.6e-99 364.4 277 66.1
FAN09G4734 Fragaria x ananassa HOM05D006979 ORTHO05D008857 8.6e-99 364.4 277 66.1
Nitab4.5_0001199g0130 Nicotiana tabacum HOM05D006979 ORTHO05D008857 1.9e-98 363.2 307 60.9
COL.COLO4_30769 Corchorus olitorius HOM05D006979 ORTHO05D008857 2.5e-98 362.8 283 66.8
Nitab4.5_0000189g0250 Nicotiana tabacum HOM05D006979 ORTHO05D008857 5.6e-98 361.7 307 60.9
RcHm_v2.0_Chr2g0145111 Rosa chinensis HOM05D006979 ORTHO05D008857 7.3e-98 361.3 259 69.5
Gorai.009G146700 Gossypium raimondii HOM05D006979 ORTHO05D008857 1.4e-96 357.1 301 63.1
Ciclev10026147m.g Citrus clementina HOM05D006979 ORTHO05D008857 1.8e-96 356.7 277 66.4
Gohir.D05G142800 Gossypium hirsutum HOM05D006979 ORTHO05D008857 1.8e-96 356.7 302 62.3
CiPaw.01G219600 Carya illinoinensis HOM05D006979 ORTHO05D008857 2.3e-96 356.3 251 70.5
Glyma.16G005300 Glycine max HOM05D006979 ORTHO05D008857 2.3e-96 356.3 262 67.2
CAN.G1368.7 Capsicum annuum HOM05D006979 ORTHO05D008857 3.1e-96 355.9 276 65.2
Glyma.07G036000 Glycine max HOM05D006979 ORTHO05D008857 4.0e-96 355.5 263 68.1
Duzib235G1224 Durio zibethinus HOM05D006979 ORTHO05D008857 8.9e-96 354.4 283 65.7
Lj3g0022239 Lotus japonicus HOM05D006979 ORTHO05D008857 8.9e-96 354.4 308 61.7
TAR383G0452 Trochodendron aralioides HOM05D006979 ORTHO05D008857 1.2e-95 354.0 279 66.3
Phvul.010G133500 Phaseolus vulgaris HOM05D006979 ORTHO05D008857 2.0e-95 353.2 263 67.3
PGSC0003DMG400011606 Solanum tuberosum HOM05D006979 ORTHO05D008857 2.0e-95 353.2 257 66.1
Dinv04035 Davidia involucrata HOM05D006979 ORTHO05D008857 3.4e-95 352.4 257 68.1
GSVIVG01016774001 Vitis vinifera HOM05D006979 ORTHO05D008857 4.4e-95 352.1 279 64.9
TWI31G0112 Tripterygium wilfordii HOM05D006979 ORTHO05D008857 1.3e-94 350.5 277 65.7
AUR62009880 Chenopodium quinoa HOM05D006979 ORTHO05D008857 8.3e-94 347.8 258 67.8
AUR62001490 Chenopodium quinoa HOM05D006979 ORTHO05D008857 1.9e-93 346.7 257 68.1
Sopen12g023760 Solanum pennellii HOM05D006979 ORTHO05D008857 1.9e-93 346.7 255 65.9
Thecc.06G118900 Theobroma cacao HOM05D006979 ORTHO05D008857 2.4e-93 346.3 275 64.0
Lalb_Chr04g0263421 Lupinus albus HOM05D006979 ORTHO05D008857 4.1e-93 345.5 260 66.5
CSS0018635 Camellia sinensis var. sinensis HOM05D006979 ORTHO05D008857 2.0e-92 343.2 258 67.1
TPR.G16442 Trifolium pratense HOM05D006979 ORTHO05D008857 2.7e-92 342.8 262 64.1
Rhsim08G0237900 Rhododendron simsii HOM05D006979 ORTHO05D008857 3.5e-92 342.4 277 60.6
VMungo0331G0985 Vigna mungo HOM05D006979 ORTHO05D008857 3.5e-92 342.4 271 63.5
ECA234G1570 Erigeron canadensis HOM05D006979 ORTHO05D008857 4.6e-92 342.0 273 61.9
Oeu015481.1 Olea europaea HOM05D006979 ORTHO05D008857 6.0e-92 341.7 282 59.6
Cpa.g.sc25.110 Carica papaya HOM05D006979 ORTHO05D008857 7.8e-92 341.3 277 64.3
Eucgr.F03173 Eucalyptus grandis HOM05D006979 ORTHO05D008857 7.8e-92 341.3 283 60.4
Actinidia32181 Actinidia chinensis HOM05D006979 ORTHO05D008857 1.3e-91 340.5 292 60.3
MELO3C024358.2 Cucumis melo HOM05D006979 ORTHO05D008857 2.3e-91 339.7 188 92.6
Solyc12g049280.3 Solanum lycopersicum HOM05D006979 ORTHO05D008857 3.0e-91 339.3 248 66.1
CSS0026622 Camellia sinensis var. sinensis HOM05D006979 ORTHO05D008857 3.9e-91 339.0 260 66.9
QL05p008051 Quercus lobata HOM05D006979 ORTHO05D008857 6.6e-91 338.2 315 58.7
Medtr8g019510 Medicago truncatula HOM05D006979 ORTHO05D008857 1.5e-90 337.0 300 59.3
FAN05G0457 Fragaria x ananassa HOM05D006979 ORTHO05D008857 7.3e-90 334.7 255 66.7
Lsat_1_v5_gn_5_135940 Lactuca sativa HOM05D006979 ORTHO05D008857 7.3e-90 334.7 309 56.6
vmacro15023 Vaccinium macrocarpon HOM05D006979 ORTHO05D008857 7.3e-90 334.7 258 64.0
SalBow7G2243 Salvia bowleyana HOM05D006979 ORTHO05D008857 9.5e-90 334.3 256 64.8
Aqoxy5G02291 Aquilegia oxysepala HOM05D006979 ORTHO05D008857 8.0e-89 331.3 265 65.3
Migut.D00941 Erythranthe guttata HOM05D006979 ORTHO05D008857 8.9e-88 327.8 255 64.7
SGA_v2.0_scaffold4G02061 Striga asiatica HOM05D006979 ORTHO05D008857 2.6e-87 326.2 257 62.3
Peaxi162Scf00177g00513 Petunia axillaris HOM05D006979 ORTHO05D008857 1.7e-86 323.6 264 61.4
Atru.chr1.3954 Acer truncatum HOM05D006979 ORTHO05D008857 4.9e-86 322.0 245 65.7
Lj9A522T69 Lonicera japonica HOM05D006979 ORTHO05D008857 1.2e-84 317.4 248 64.5
THA.LOC104813956 Tarenaya hassleriana HOM05D006979 ORTHO05D008857 2.7e-84 316.2 291 57.7
unitig_8.g3563 Utricularia gibba HOM05D006979 ORTHO05D008857 1.3e-83 313.9 256 62.5
Sc08g0005680 Simmondsia chinensis HOM05D006979 ORTHO05D008857 5.1e-83 312.0 257 61.1
PGR119G0938 Punica granatum HOM05D006979 ORTHO05D008857 1.1e-82 310.8 270 59.3
CDE05G0714 Ceratophyllum demersum HOM05D006979 ORTHO05D008857 1.5e-82 310.5 251 63.3
Hund05741 Selenicereus undatus HOM05D006979 ORTHO05D008857 1.9e-82 310.1 319 53.6
Carub.0002s1948 Capsella rubella HOM05D006979 ORTHO05D008857 1.6e-81 307.0 277 57.4
BcaNung07150 Brassica carinata HOM05D006979 ORTHO05D008857 2.1e-81 306.6 279 56.6
Haze_16022 Corylus avellana HOM05D006979 ORTHO05D008857 2.1e-81 306.6 278 61.2
PSO210G4684 Papaver somniferum HOM05D006979 ORTHO05D008857 6.2e-81 305.1 270 61.9
AL2G32310 Arabidopsis lyrata HOM05D006979 ORTHO05D008857 8.1e-81 304.7 282 56.7
C06p46960 Brassica napus HOM05D006979 ORTHO05D008857 1.4e-80 303.9 280 55.7
BolC6t39737H Brassica oleracea HOM05D006979 ORTHO05D008857 1.4e-80 303.9 280 55.7
Sp5g27700 Schrenkiella parvula HOM05D006979 ORTHO05D008857 1.8e-80 303.5 284 55.6
PSO210G5065 Papaver somniferum HOM05D006979 ORTHO05D008857 3.1e-80 302.8 294 55.1
BcaC08g46707 Brassica carinata HOM05D006979 ORTHO05D008857 8.9e-80 301.2 280 55.7
Thhalv10018914m.g Eutrema salsugineum HOM05D006979 ORTHO05D008857 1.2e-79 300.8 281 54.8
Gohir.A05G140600 Gossypium hirsutum HOM05D006979 ORTHO05D008857 7.6e-79 298.1 301 56.1
Os03g0410700 Oryza sativa ssp. japonica HOM05D006979 ORTHO05D008857 1.3e-78 297.4 263 59.7
Cc04_g01400 Coffea canephora HOM05D006979 ORTHO05D008857 1.7e-78 297.0 241 63.1
MBI19_g11849_MAGBIO Magnolia biondii HOM05D006979 ORTHO05D008857 2.2e-78 296.6 282 56.0
ATR0598G212 Amborella trichopoda HOM05D006979 ORTHO05D008857 2.4e-77 293.1 266 56.8
arahy.Tifrunner.gnm1.ann1.4E7AR5 Arachis hypogaea HOM05D006979 ORTHO05D008857 6.0e-76 288.5 298 53.7
A07p38800 Brassica napus HOM05D006979 ORTHO05D008857 1.3e-75 287.3 299 51.2
BraA07t31434Z Brassica rapa HOM05D006979 ORTHO05D008857 1.3e-75 287.3 299 51.2
arahy.Tifrunner.gnm1.ann1.IV001U Arachis hypogaea HOM05D006979 ORTHO05D008857 1.7e-75 287.0 298 53.7
Aa31LG4G3010 Aethionema arabicum HOM05D006979 ORTHO05D008857 8.6e-75 284.6 266 55.3
Ca_05018_v3 Cicer arietinum L. HOM05D006979 ORTHO05D008857 1.7e-67 260.4 196 65.3
Nn6g35601 Nelumbo nucifera HOM05D006979 ORTHO05D008857 5.1e-67 258.8 296 50.0
Pp3c11_2100 Physcomitrium patens HOM05D006979 ORTHO05D008857 2.8e-65 253.1 317 46.4
Psat4g183680 Pisum sativum HOM05D006979 ORTHO05D008857 2.8e-65 253.1 207 61.4
AT1G72640 Arabidopsis thaliana HOM05D006979 ORTHO05D008857 9.9e-63 244.6 240 55.0
Zm00001eb019720 Zea mays HOM05D006979 ORTHO05D008857 7.3e-58 228.4 204 59.8
SMO117G0249 Selaginella moellendorffii HOM05D006979 ORTHO05D008857 2.4e-56 223.4 257 47.5
Hma1.2p1_0496F.1_g166210 Hydrangea macrophylla HOM05D006979 ORTHO05D008857 1.2e-55 221.1 170 65.3
CARHR065560 Cardamine hirsuta HOM05D006979 ORTHO05D008857 4.9e-54 215.7 190 57.4
EL10Ac7g16405 Beta vulgaris HOM05D006979 ORTHO05D008857 5.4e-53 212.2 303 44.2
FAN14G3231 Fragaria x ananassa HOM05D006979 ORTHO05D008857 7.1e-53 211.8 158 63.3
AagrBONN_evm.TU.Sc2ySwM_362.1497 Anthoceros agrestis HOM05D006979 ORTHO05D008857 1.6e-49 200.7 231 50.6
Hma1.2p1_0496F.1_g166200 Hydrangea macrophylla HOM05D006979 ORTHO05D008857 9.0e-48 194.9 208 53.4
Ah.08g216750 Amaranthus hybridus HOM05D006979 ORTHO05D008857 2.5e-37 160.2 169 55.6
SEGI_25115 Sequoiadendron giganteum HOM05D006979 ORTHO05D008857 1.9e-34 150.6 134 53.7
Mapoly0030s0153 Marchantia polymorpha HOM05D006979 ORTHO05D008857 1.3e-33 147.9 147 54.4
Cre02.g095133 Chlamydomonas reinhardtii HOM05D006979 ORTHO05D008857 6.7e-19 99.0 296 31.1
CDE05G2075 Ceratophyllum demersum HOM05D006979 ORTHO05D008857 9.7e-18 95.1 189 36.5
MCO12G160 Micromonas commoda HOM05D006979 ORTHO05D008857 1.8e-16 90.9 280 31.1
Medtr8g019490 Medicago truncatula HOM05D006979 ORTHO05D008857 1.7e-14 84.3 102 42.2
RcHm_v2.0_Chr6g0307231 Rosa chinensis HOM05D006979 ORTHO05D008857 1.8e-11 74.3 53 71.7
PRCOL_00001479 Prasinoderma coloniale HOM05D006979 ORTHO05D008857 5.2e-11 72.8 116 39.7
RcHm_v2.0_Chr3g0497381 Rosa chinensis HOM05D006979 ORTHO05D008857 2.0e-10 70.9 53 67.9
CBR_g8964 Chara braunii HOM05D003730 ORTHO05D004458 5.9e-07 59.3 97 37.1
arahy.Tifrunner.gnm1.ann1.E6NKCB Arachis hypogaea HOM05D003730 ORTHO05D004458 1.7e-06 57.8 131 32.1
CiPaw.09G194500 Carya illinoinensis HOM05D003730 ORTHO05D004458 1.7e-06 57.8 117 35.9
Mapoly0030s0154 Marchantia polymorpha HOM05D006979 ORTHO05D008857 1.7e-06 57.8 54 44.4
arahy.Tifrunner.gnm1.ann1.L41CIL Arachis hypogaea HOM05D003730 ORTHO05D004458 2.9e-06 57.0 131 32.1
Thhalv10025684m.g Eutrema salsugineum HOM05D006655 ORTHO05D007986 8.5e-06 55.5 239 25.5
RcHm_v2.0_Chr5g0050831 Rosa chinensis HOM05D006655 ORTHO05D007986 8.5e-06 55.5 287 26.8
Hund10632 Selenicereus undatus HOM05D003730 ORTHO05D004458 8.5e-06 55.5 116 33.6


User provided reference genes

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