Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_7G033450 Cucumis sativus L. HOM05D005658 ORTHO05D006989 3.8e-108 394.8 194 100.0
MELO3C027085.2 Cucumis melo HOM05D005658 ORTHO05D006989 1.0e-92 343.6 192 88.5
ClCG09G001890 Citrullus lanatus HOM05D005658 ORTHO05D006989 2.9e-92 342.0 192 86.5
Sed0023183 Sechium edule HOM05D005658 ORTHO05D006989 1.6e-82 309.7 192 76.6
Sed0000814 Sechium edule HOM05D005658 ORTHO05D006989 2.1e-82 309.3 192 78.6
Eucgr.J02954 Eucalyptus grandis HOM05D005658 ORTHO05D006989 1.3e-71 273.5 190 67.9
CDE08G1506 Ceratophyllum demersum HOM05D005658 ORTHO05D006989 1.2e-69 266.9 190 68.4
CANSAT56G4082 Cannabis sativa HOM05D005658 ORTHO05D006989 8.5e-68 260.8 192 65.6
TAR383G0711 Trochodendron aralioides HOM05D005658 ORTHO05D006989 1.5e-67 260.0 192 66.7
PGR102G0856 Punica granatum HOM05D005658 ORTHO05D006989 2.5e-67 259.2 193 65.8
Cc04_g02920 Coffea canephora HOM05D005658 ORTHO05D006989 1.6e-66 256.5 189 66.1
Solyc03g120540.3 Solanum lycopersicum HOM05D005658 ORTHO05D006989 1.6e-66 256.5 188 66.0
Glyma.07G018600 Glycine max HOM05D005658 ORTHO05D006989 2.1e-66 256.1 192 64.1
Glyma.08G203800 Glycine max HOM05D005658 ORTHO05D006989 2.7e-66 255.8 192 63.5
Lalb_Chr04g0262841 Lupinus albus HOM05D005658 ORTHO05D006989 2.7e-66 255.8 192 64.1
CAN.G438.34 Capsicum annuum HOM05D005658 ORTHO05D006989 8.0e-66 254.2 188 63.8
CANSAT56G2118 Cannabis sativa HOM05D005658 ORTHO05D006989 1.0e-65 253.8 191 64.9
Lj5g0010105 Lotus japonicus HOM05D005658 ORTHO05D006989 1.0e-65 253.8 192 65.6
Nitab4.5_0004205g0010 Nicotiana tabacum HOM05D005658 ORTHO05D006989 1.4e-65 253.4 187 66.3
TPR.G38603 Trifolium pratense HOM05D005658 ORTHO05D006989 1.4e-65 253.4 192 64.1
Manes.04G130900 Manihot esculenta HOM05D005658 ORTHO05D006989 1.8e-65 253.1 192 63.0
CiPaw.01G234800 Carya illinoinensis HOM05D005658 ORTHO05D006989 3.0e-65 252.3 192 63.0
Psat5g078360 Pisum sativum HOM05D005658 ORTHO05D006989 4.0e-65 251.9 192 62.5
Lj5g0006747 Lotus japonicus HOM05D005658 ORTHO05D006989 5.2e-65 251.5 190 65.3
Nitab4.5_0001315g0030 Nicotiana tabacum HOM05D005658 ORTHO05D006989 5.2e-65 251.5 187 65.2
PGSC0003DMG400002629 Solanum tuberosum HOM05D005658 ORTHO05D006989 6.8e-65 251.1 188 64.4
Cfa002103 Carpinus fangiana HOM05D005658 ORTHO05D006989 1.2e-64 250.4 193 63.2
Psat7g255000 Pisum sativum HOM05D005658 ORTHO05D006989 2.0e-64 249.6 193 63.2
MSTRG.9467 Avicennia marina HOM05D005658 ORTHO05D006989 2.6e-64 249.2 187 64.7
Haze_16346 Corylus avellana HOM05D005658 ORTHO05D006989 5.7e-64 248.1 192 62.5
GSVIVG01017053001 Vitis vinifera HOM05D005658 ORTHO05D006989 5.7e-64 248.1 190 62.6
VMungo0331G1814 Vigna mungo HOM05D005658 ORTHO05D006989 7.5e-64 247.7 190 62.6
GSVIVG01017054001 Vitis vinifera HOM05D005658 ORTHO05D006989 7.5e-64 247.7 192 63.5
ATR0736G109 Amborella trichopoda HOM05D005658 ORTHO05D006989 1.3e-63 246.9 188 64.4
ECA234G0336 Erigeron canadensis HOM05D005658 ORTHO05D006989 1.3e-63 246.9 184 64.1
QL05p021437 Quercus lobata HOM05D005658 ORTHO05D006989 1.7e-63 246.5 172 69.2
Aqoxy7G01547 Aquilegia oxysepala HOM05D005658 ORTHO05D006989 2.2e-63 246.1 188 62.2
EL10Ac9g22053 Beta vulgaris HOM05D005658 ORTHO05D006989 2.2e-63 246.1 190 62.6
Nn3g18122 Nelumbo nucifera HOM05D005658 ORTHO05D006989 2.2e-63 246.1 190 62.1
SalBow7G0412 Salvia bowleyana HOM05D005658 ORTHO05D006989 2.2e-63 246.1 187 64.7
SEGI_12338 Sequoiadendron giganteum HOM05D005658 ORTHO05D006989 2.2e-63 246.1 186 62.4
arahy.Tifrunner.gnm1.ann1.5XEL3K Arachis hypogaea HOM05D005658 ORTHO05D006989 2.8e-63 245.7 186 62.4
Prupe.3G064800 Prunus persica HOM05D005658 ORTHO05D006989 3.7e-63 245.4 192 62.5
SGA_v2.0_scaffold68G22977 Striga asiatica HOM05D005658 ORTHO05D006989 3.7e-63 245.4 186 64.5
Thecc.06G094500 Theobroma cacao HOM05D005658 ORTHO05D006989 3.7e-63 245.4 190 61.6
Duzib235G1329 Durio zibethinus HOM05D005658 ORTHO05D006989 4.8e-63 245.0 192 62.5
MD09G1208600 Malus domestica HOM05D005658 ORTHO05D006989 4.8e-63 245.0 193 60.6
Sopen03g039400 Solanum pennellii HOM05D005658 ORTHO05D006989 4.8e-63 245.0 178 67.4
Potri.003G051700 Populus trichocarpa HOM05D005658 ORTHO05D006989 6.3e-63 244.6 190 61.1
AT3G16190 Arabidopsis thaliana HOM05D005658 ORTHO05D006989 8.3e-63 244.2 193 60.1
AL3G28880 Arabidopsis lyrata HOM05D005658 ORTHO05D006989 1.4e-62 243.4 193 60.1
Thhalv10021560m.g Eutrema salsugineum HOM05D005658 ORTHO05D006989 1.4e-62 243.4 193 61.1
HanXRQChr10g0313501 Helianthus annuus HOM05D005658 ORTHO05D006989 1.8e-62 243.0 183 64.5
THA.LOC104817977 Tarenaya hassleriana HOM05D005658 ORTHO05D006989 1.8e-62 243.0 192 59.9
CARHR091380 Cardamine hirsuta HOM05D005658 ORTHO05D006989 3.1e-62 242.3 193 60.6
FAN14G0081 Fragaria x ananassa HOM05D005658 ORTHO05D006989 3.1e-62 242.3 193 61.7
Phvul.010G147700 Phaseolus vulgaris HOM05D005658 ORTHO05D006989 3.1e-62 242.3 192 61.5
VMungo0331G0597 Vigna mungo HOM05D005658 ORTHO05D006989 4.1e-62 241.9 192 61.5
RcHm_v2.0_Chr2g0139251 Rosa chinensis HOM05D005658 ORTHO05D006989 1.2e-61 240.4 193 59.6
Phvul.010G147800 Phaseolus vulgaris HOM05D005658 ORTHO05D006989 4.5e-61 238.4 192 59.9
Sp3g14560 Schrenkiella parvula HOM05D005658 ORTHO05D006989 4.5e-61 238.4 193 59.6
Medtr4g011330 Medicago truncatula HOM05D005658 ORTHO05D006989 7.7e-61 237.7 170 67.6
BcaC09g48588 Brassica carinata HOM05D005658 ORTHO05D006989 1.0e-60 237.3 193 59.1
Gohir.D03G062533 Gossypium hirsutum HOM05D005658 ORTHO05D006989 1.3e-60 236.9 192 60.4
PSO210G2136 Papaver somniferum HOM05D005658 ORTHO05D006989 1.3e-60 236.9 190 61.6
arahy.Tifrunner.gnm1.ann1.17ZCGM Arachis hypogaea HOM05D005658 ORTHO05D006989 2.2e-60 236.1 186 62.4
FAN02G2498 Fragaria x ananassa HOM05D005658 ORTHO05D006989 2.2e-60 236.1 193 60.1
SalBow7G1899 Salvia bowleyana HOM05D005658 ORTHO05D006989 2.2e-60 236.1 187 61.5
FvH4_6g31890 Fragaria vesca HOM05D005658 ORTHO05D006989 2.9e-60 235.7 193 61.1
Ca_20421_v3 Cicer arietinum L. HOM05D005658 ORTHO05D006989 3.8e-60 235.3 170 66.5
Lj9A509T93 Lonicera japonica HOM05D005658 ORTHO05D006989 3.8e-60 235.3 167 68.9
COL.COLO4_30455 Corchorus olitorius HOM05D005658 ORTHO05D006989 5.0e-60 235.0 190 58.9
Ciclev10026541m.g Citrus clementina HOM05D005658 ORTHO05D006989 8.5e-60 234.2 189 60.8
DCAR_016205 Daucus carota HOM05D005658 ORTHO05D006989 1.1e-59 233.8 188 62.8
A05p33310 Brassica napus HOM05D005658 ORTHO05D006989 1.5e-59 233.4 194 58.8
Migut.D01014 Erythranthe guttata HOM05D005658 ORTHO05D006989 1.9e-59 233.0 192 60.4
Gohir.A02G119700 Gossypium hirsutum HOM05D005658 ORTHO05D006989 2.5e-59 232.6 192 59.4
Gorai.003G064300 Gossypium raimondii HOM05D005658 ORTHO05D006989 4.2e-59 231.9 192 59.9
MBI04_g04855_MAGBIO Magnolia biondii HOM05D005658 ORTHO05D006989 7.2e-59 231.1 182 62.1
SGA_v2.0_scaffold4G02011 Striga asiatica HOM05D005658 ORTHO05D006989 7.2e-59 231.1 173 64.7
CSS0031663 Camellia sinensis var. sinensis HOM05D005658 ORTHO05D006989 9.4e-59 230.7 183 62.3
Os02g0276400 Oryza sativa ssp. japonica HOM05D005658 ORTHO05D006989 9.4e-59 230.7 189 59.3
Sabra03G0027300 Salix brachista HOM05D005658 ORTHO05D006989 9.4e-59 230.7 170 65.9
C05p50310 Brassica napus HOM05D005658 ORTHO05D006989 1.2e-58 230.3 194 58.2
PSO210G3060 Papaver somniferum HOM05D005658 ORTHO05D006989 1.2e-58 230.3 188 62.2
PSO421G0294 Papaver somniferum HOM05D005658 ORTHO05D006989 1.2e-58 230.3 189 61.9
HPP92_003927 Vanilla planifolia HOM05D005658 ORTHO05D006989 1.2e-58 230.3 186 61.8
unitig_746.g26661 Utricularia gibba HOM05D005658 ORTHO05D006989 2.1e-58 229.6 191 58.6
arahy.Tifrunner.gnm1.ann1.JS39C6 Arachis hypogaea HOM05D005658 ORTHO05D006989 3.6e-58 228.8 186 61.3
Lsat_1_v5_gn_5_131001 Lactuca sativa HOM05D000012 ORTHO05D000804 6.1e-58 228.0 166 67.5
Actinidia08995 Actinidia chinensis HOM05D005658 ORTHO05D006989 8.0e-58 227.6 189 60.3
BraA05t22156Z Brassica rapa HOM05D005658 ORTHO05D006989 1.0e-57 227.3 202 56.9
RcHm_v2.0_Chr2g0139241 Rosa chinensis HOM05D005658 ORTHO05D006989 1.0e-57 227.3 190 60.0
Oeu029646.1 Olea europaea HOM05D005658 ORTHO05D006989 1.8e-57 226.5 167 67.1
BolC5t33780H Brassica oleracea HOM05D004680 ORTHO05D005939 6.8e-57 224.6 204 55.9
AUR62011683 Chenopodium quinoa HOM05D005658 ORTHO05D006989 1.3e-55 220.3 170 62.4
Gohir.D03G066800 Gossypium hirsutum HOM05D005658 ORTHO05D006989 3.7e-55 218.8 170 63.5
vmacro16973 Vaccinium macrocarpon HOM05D005658 ORTHO05D006989 6.3e-55 218.0 179 60.9
Migut.D01013 Erythranthe guttata HOM05D005658 ORTHO05D006989 8.3e-55 217.6 176 59.7
Ah.01g021740 Amaranthus hybridus HOM05D005658 ORTHO05D006989 1.4e-54 216.9 170 62.4
Nitab4.5_0001968g0140 Nicotiana tabacum HOM05D005658 ORTHO05D006989 1.4e-54 216.9 188 60.1
COL.COLO4_30457 Corchorus olitorius HOM05D005658 ORTHO05D006989 1.8e-54 216.5 170 62.4
AUR62016509 Chenopodium quinoa HOM05D005658 ORTHO05D006989 3.1e-54 215.7 170 59.4
Dinv38010 Davidia involucrata HOM05D005658 ORTHO05D006989 3.1e-54 215.7 165 63.6
Sed0018991 Sechium edule HOM05D005658 ORTHO05D006989 4.1e-54 215.3 133 76.7
Rhsim12G0201100 Rhododendron simsii HOM05D005658 ORTHO05D006989 9.2e-54 214.2 167 63.5
Mapoly0052s0007 Marchantia polymorpha HOM05D005658 ORTHO05D006989 3.5e-53 212.2 188 54.3
Os02g0276200 Oryza sativa ssp. japonica HOM05D005658 ORTHO05D006989 3.5e-53 212.2 177 59.3
Sc12g0009500 Simmondsia chinensis HOM05D005658 ORTHO05D006989 5.9e-53 211.5 173 59.0
Aa31LG8G3340 Aethionema arabicum HOM05D004680 ORTHO05D005939 1.3e-52 210.3 175 58.9
Carub.0003s1594 Capsella rubella HOM05D005658 ORTHO05D006989 5.0e-52 208.4 167 60.5
AUR62016508 Chenopodium quinoa HOM05D005658 ORTHO05D006989 8.6e-52 207.6 190 55.3
PSO063G2380 Papaver somniferum HOM05D005658 ORTHO05D006989 1.9e-51 206.5 186 57.0
Ciclev10026617m.g Citrus clementina HOM05D005658 ORTHO05D006989 2.5e-51 206.1 161 58.4
COL.COLO4_18473 Corchorus olitorius HOM05D005658 ORTHO05D006989 2.5e-51 206.1 190 55.3
FAN05G4480 Fragaria x ananassa HOM05D005658 ORTHO05D006989 5.6e-51 204.9 166 60.8
SMO147G0229 Selaginella moellendorffii HOM05D005658 ORTHO05D006989 2.3e-49 199.5 193 52.8
Pp3c13_4590 Physcomitrium patens HOM05D005658 ORTHO05D006989 2.6e-48 196.1 187 51.9
TPR.G40810 Trifolium pratense HOM05D005658 ORTHO05D006989 2.6e-48 196.1 138 69.6
AagrBONN_evm.TU.Sc2ySwM_369.407 Anthoceros agrestis HOM05D002948 ORTHO05D003577 1.3e-47 193.7 181 53.6
Peaxi162Scf00015g00132 Petunia axillaris HOM05D005658 ORTHO05D006989 1.7e-47 193.4 187 53.5
Psat7g255080 Pisum sativum HOM05D005658 ORTHO05D006989 2.9e-47 192.6 138 66.7
Psat5g078240 Pisum sativum HOM05D005658 ORTHO05D006989 5.4e-46 188.3 193 49.7
Haze_16345 Corylus avellana HOM05D003600 ORTHO05D004129 7.8e-45 184.5 118 77.1
Cpa.g.sc1241.2 Carica papaya HOM05D005658 ORTHO05D006989 1.5e-43 180.3 133 63.9
CBR_g48432 Chara braunii HOM05D005658 ORTHO05D006989 4.3e-43 178.7 189 48.7
Nitab4.5_0003039g0010 Nicotiana tabacum HOM05D005658 ORTHO05D006989 1.1e-38 164.1 188 50.5
Atru.chr1.3413 Acer truncatum HOM05D005658 ORTHO05D006989 7.8e-37 157.9 114 70.2
AUR62011684 Chenopodium quinoa HOM05D005658 ORTHO05D006989 7.8e-37 157.9 170 50.0
Cre16.g674650 Chlamydomonas reinhardtii HOM05D005658 ORTHO05D006989 7.8e-37 157.9 183 44.8
Peaxi162Scf00015g00131 Petunia axillaris HOM05D005658 ORTHO05D006989 7.3e-35 151.4 187 44.4
Glyma.08G203700 Glycine max HOM05D005658 ORTHO05D006989 1.6e-34 150.2 118 60.2
Manes.11G037100 Manihot esculenta HOM05D005658 ORTHO05D006989 3.2e-30 136.0 178 45.5
CAN.G214.3 Capsicum annuum HOM05D005658 ORTHO05D006989 4.6e-21 105.5 137 45.3
QL02p037511 Quercus lobata HOM05D005658 ORTHO05D006989 1.4e-14 84.0 61 68.9
Cre10.g448500 Chlamydomonas reinhardtii HOM05D006499 ORTHO05D007874 4.3e-11 72.4 177 32.2
TPR.G1351 Trifolium pratense HOM05D005658 ORTHO05D006989 2.8e-10 69.7 58 48.3
MELO3C035027.2 Cucumis melo HOM05D005658 ORTHO05D006989 1.8e-09 67.0 105 44.8
CiPaw.06G061000 Carya illinoinensis HOM05D006499 ORTHO05D007874 7.6e-08 61.6 172 28.5
MCO09G426 Micromonas commoda HOM05D006499 ORTHO05D007874 1.7e-07 60.5 174 28.7
Atru.chr1.3414 Acer truncatum HOM05D005658 ORTHO05D006989 2.2e-07 60.1 52 48.1
Zm00001eb237290 Zea mays HOM05D005658 ORTHO05D006989 2.2e-07 60.1 54 46.3
MBI06_g20294_MAGBIO Magnolia biondii HOM05D006499 ORTHO05D007874 3.8e-07 59.3 165 27.9
Lj2g0027544 Lotus japonicus HOM05D006499 ORTHO05D007874 4.9e-07 58.9 173 28.9
Cfa026003 Carpinus fangiana HOM05D006499 ORTHO05D007874 6.4e-07 58.5 146 28.1
Haze_11761 Corylus avellana HOM05D006499 ORTHO05D007874 8.4e-07 58.2 168 29.8
Nitab4.5_0004301g0030 Nicotiana tabacum HOM05D006499 ORTHO05D007874 1.1e-06 57.8 165 26.7
Cfa008745 Carpinus fangiana HOM05D006499 ORTHO05D007874 1.9e-06 57.0 168 30.4
Ca_29435_v3 Cicer arietinum L. HOM05D006499 ORTHO05D007874 4.2e-06 55.8 173 28.9


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