Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_7G028490 Cucumis sativus L. HOM05D007078 ORTHO05D008745 1.8e-122 442.6 222 100.0
MELO3C015872.2 Cucumis melo HOM05D007078 ORTHO05D008745 2.3e-117 425.6 222 95.5
Sed0016724 Sechium edule HOM05D007078 ORTHO05D008745 3.9e-101 371.7 219 85.8
QL12p022959 Quercus lobata HOM05D007078 ORTHO05D008745 1.3e-80 303.5 224 73.2
Dinv11266 Davidia involucrata HOM05D007078 ORTHO05D008745 2.9e-80 302.4 232 70.7
GSVIVG01011060001 Vitis vinifera HOM05D007078 ORTHO05D008745 1.1e-79 300.4 224 71.0
CANSAT25G2561 Cannabis sativa HOM05D007078 ORTHO05D008745 2.5e-79 299.3 227 72.7
TWI59G1055 Tripterygium wilfordii HOM05D007078 ORTHO05D008745 3.2e-79 298.9 221 71.9
MD03G1271700 Malus domestica HOM05D007078 ORTHO05D008745 4.2e-79 298.5 229 72.9
Prupe.8G247900 Prunus persica HOM05D007078 ORTHO05D008745 4.2e-79 298.5 221 73.8
ClCG09G006760 Citrullus lanatus HOM05D007078 ORTHO05D008745 1.6e-78 296.6 209 75.1
Lsat_1_v5_gn_9_1840 Lactuca sativa HOM05D007078 ORTHO05D008745 1.4e-77 293.5 230 68.7
Hma1.2p1_0628F.1_g191760 Hydrangea macrophylla HOM05D007078 ORTHO05D008745 1.8e-77 293.1 220 70.0
CiPaw.07G095800 Carya illinoinensis HOM05D007078 ORTHO05D008745 4.0e-77 292.0 227 69.2
HanXRQChr15g0466581 Helianthus annuus HOM05D007078 ORTHO05D008745 2.6e-76 289.3 225 69.3
Gorai.004G084200 Gossypium raimondii HOM05D007078 ORTHO05D008745 7.5e-76 287.7 229 68.6
Manes.05G071800 Manihot esculenta HOM05D007078 ORTHO05D008745 7.5e-76 287.7 223 67.7
CSS0036917 Camellia sinensis var. sinensis HOM05D007078 ORTHO05D008745 9.7e-76 287.3 238 66.4
CSS0044942 Camellia sinensis var. sinensis HOM05D007078 ORTHO05D008745 1.7e-75 286.6 238 66.4
RcHm_v2.0_Chr6g0291981 Rosa chinensis HOM05D007078 ORTHO05D008745 3.7e-75 285.4 226 68.6
Gohir.D08G078400 Gossypium hirsutum HOM05D007078 ORTHO05D008745 4.8e-75 285.0 229 68.1
TAR362G1057 Trochodendron aralioides HOM05D007078 ORTHO05D008745 8.2e-75 284.3 223 69.5
Cfa006079 Carpinus fangiana HOM05D007078 ORTHO05D008745 1.4e-74 283.5 224 69.2
Ciclev10022169m.g Citrus clementina HOM05D007078 ORTHO05D008745 1.4e-74 283.5 222 68.5
Nn3g21178 Nelumbo nucifera HOM05D007078 ORTHO05D008745 1.4e-74 283.5 220 67.3
Atru.chr5.1330 Acer truncatum HOM05D007078 ORTHO05D008745 2.4e-74 282.7 225 66.2
Potri.014G137300 Populus trichocarpa HOM05D007078 ORTHO05D008745 2.4e-74 282.7 230 67.0
ECA247G1342 Erigeron canadensis HOM05D007078 ORTHO05D008745 5.3e-74 281.6 229 65.5
MD11G1292300 Malus domestica HOM05D007078 ORTHO05D008745 1.2e-73 280.4 220 72.3
FvH4_2g24170 Fragaria vesca HOM05D007078 ORTHO05D008745 1.6e-73 280.0 223 68.2
FAN27G0292 Fragaria x ananassa HOM05D007078 ORTHO05D008745 2.7e-73 279.3 221 68.8
EL10Ac7g17029 Beta vulgaris HOM05D007078 ORTHO05D008745 3.5e-73 278.9 228 66.2
Phvul.001G147500 Phaseolus vulgaris HOM05D007078 ORTHO05D008745 4.5e-73 278.5 202 70.3
Aqoxy5G00564 Aquilegia oxysepala HOM05D007078 ORTHO05D008745 5.9e-73 278.1 175 79.4
Cpa.g.sc9.128 Carica papaya HOM05D007078 ORTHO05D008745 5.9e-73 278.1 187 74.9
Haze_04771 Corylus avellana HOM05D007078 ORTHO05D008745 1.3e-72 276.9 221 70.6
Eucgr.K03409 Eucalyptus grandis HOM05D007078 ORTHO05D008745 1.3e-72 276.9 184 77.2
arahy.Tifrunner.gnm1.ann1.9GKU3H Arachis hypogaea HOM05D007078 ORTHO05D008745 2.2e-72 276.2 222 66.2
arahy.Tifrunner.gnm1.ann1.ERKA9X Arachis hypogaea HOM05D007078 ORTHO05D008745 2.2e-72 276.2 222 66.2
Migut.D00250 Erythranthe guttata HOM05D007078 ORTHO05D008745 3.8e-72 275.4 186 73.1
Duzib138G1888 Durio zibethinus HOM05D007078 ORTHO05D008745 5.0e-72 275.0 220 66.4
Oeu047893.1 Olea europaea HOM05D007078 ORTHO05D008745 5.0e-72 275.0 217 69.1
VMungo1383G1152 Vigna mungo HOM05D007078 ORTHO05D008745 5.0e-72 275.0 236 63.1
DCAR_018382 Daucus carota HOM05D007078 ORTHO05D008745 1.1e-71 273.9 143 92.3
Lj1g0026447 Lotus japonicus HOM05D007078 ORTHO05D008745 1.1e-71 273.9 233 65.2
Glyma.19G152600 Glycine max HOM05D007078 ORTHO05D008745 1.9e-71 273.1 203 68.0
PGR044G0767 Punica granatum HOM05D007078 ORTHO05D008745 5.5e-71 271.6 143 90.9
Nitab4.5_0005757g0030 Nicotiana tabacum HOM05D007078 ORTHO05D008745 7.2e-71 271.2 229 62.0
THA.LOC104823061 Tarenaya hassleriana HOM05D007078 ORTHO05D008745 7.2e-71 271.2 168 83.3
Cc09_g03260 Coffea canephora HOM05D007078 ORTHO05D008745 1.2e-70 270.4 157 82.2
FAN15G0223 Fragaria x ananassa HOM05D007078 ORTHO05D008745 3.6e-70 268.9 241 63.5
Medtr7g094220 Medicago truncatula HOM05D007078 ORTHO05D008745 4.7e-70 268.5 226 65.5
Rhsim13G0021200 Rhododendron simsii HOM05D005701 ORTHO05D007058 4.7e-70 268.5 224 65.6
TPR.G32805 Trifolium pratense HOM05D007078 ORTHO05D008745 6.1e-70 268.1 226 64.6
Nitab4.5_0001436g0040 Nicotiana tabacum HOM05D007078 ORTHO05D008745 8.0e-70 267.7 229 62.0
Sp4g29960 Schrenkiella parvula HOM05D007078 ORTHO05D008745 1.0e-69 267.3 218 67.0
Thhalv10001627m.g Eutrema salsugineum HOM05D007078 ORTHO05D008745 3.0e-69 265.8 187 74.3
PSO832G3632 Papaver somniferum HOM05D007078 ORTHO05D008745 3.0e-69 265.8 180 73.3
vmacro02537 Vaccinium macrocarpon HOM05D007078 ORTHO05D008745 3.0e-69 265.8 229 63.8
CDE12G0236 Ceratophyllum demersum HOM05D007078 ORTHO05D008745 4.0e-69 265.4 182 73.1
Ca_08555_v3 Cicer arietinum L. HOM05D007078 ORTHO05D008745 4.0e-69 265.4 219 63.9
AT2G48070 Arabidopsis thaliana HOM05D007078 ORTHO05D008745 5.2e-69 265.0 184 73.9
PSO210G6132 Papaver somniferum HOM05D007078 ORTHO05D008745 5.2e-69 265.0 180 73.3
ATR0626G125 Amborella trichopoda HOM05D007078 ORTHO05D008745 6.8e-69 264.6 148 83.8
CARHR143460 Cardamine hirsuta HOM05D007078 ORTHO05D008745 3.4e-68 262.3 180 73.9
Thecc.01G285900 Theobroma cacao HOM05D007078 ORTHO05D008745 3.4e-68 262.3 220 67.7
unitig_0.g636 Utricularia gibba HOM05D007078 ORTHO05D008745 4.4e-68 261.9 174 75.9
Os05g0404400 Oryza sativa ssp. japonica HOM05D007078 ORTHO05D008745 5.7e-68 261.5 174 77.0
AL4G47660 Arabidopsis lyrata HOM05D007078 ORTHO05D008745 7.5e-68 261.2 188 70.7
A05p00060 Brassica napus HOM05D007078 ORTHO05D008745 1.7e-67 260.0 189 70.4
BraA05t19002Z Brassica rapa HOM05D007078 ORTHO05D008745 1.7e-67 260.0 189 70.4
Lj1C43T3 Lonicera japonica HOM05D007078 ORTHO05D008745 1.7e-67 260.0 210 65.7
Glyma.03G149600 Glycine max HOM05D007078 ORTHO05D008745 2.2e-67 259.6 203 68.5
PGSC0003DMG400023469 Solanum tuberosum HOM05D007078 ORTHO05D008745 2.2e-67 259.6 190 71.1
Solyc05g055850.3 Solanum lycopersicum HOM05D007078 ORTHO05D008745 2.8e-67 259.2 230 61.7
Sopen05g034250 Solanum pennellii HOM05D007078 ORTHO05D008745 2.8e-67 259.2 230 61.7
Sabra14G0103700 Salix brachista HOM05D007078 ORTHO05D008745 4.8e-67 258.5 223 63.2
BolSC55t61232H Brassica oleracea HOM05D007078 ORTHO05D008745 1.1e-66 257.3 212 66.5
BcaC02g12558 Brassica carinata HOM05D007078 ORTHO05D008745 1.4e-66 256.9 207 67.6
Psat3g066400 Pisum sativum HOM05D007078 ORTHO05D008745 2.4e-66 256.1 168 76.8
PGR142G0265 Punica granatum HOM05D007078 ORTHO05D008745 3.1e-66 255.8 143 86.0
Sc24g0004060 Simmondsia chinensis HOM05D007078 ORTHO05D008745 5.4e-66 255.0 226 62.4
Carub.0004s3077 Capsella rubella HOM05D007078 ORTHO05D008745 7.0e-66 254.6 183 72.1
FAN24G3201 Fragaria x ananassa HOM05D007078 ORTHO05D008745 7.0e-66 254.6 212 67.0
BcaB02g08732 Brassica carinata HOM05D007078 ORTHO05D008745 9.1e-66 254.2 143 84.6
AUR62006322 Chenopodium quinoa HOM05D007078 ORTHO05D008745 8.5e-64 247.7 136 87.5
Aa31LG1G29480 Aethionema arabicum HOM05D007078 ORTHO05D008745 2.5e-63 246.1 133 90.2
BNapus_Darmor_BZH_scaffold_188p00040 Brassica napus HOM05D007078 ORTHO05D008745 1.2e-62 243.8 205 66.3
Lalb_Chr01g0020251 Lupinus albus HOM05D007078 ORTHO05D008745 1.6e-62 243.4 180 67.8
AagrBONN_evm.TU.Sc2ySwM_117.1018 Anthoceros agrestis HOM05D007078 ORTHO05D008745 4.7e-62 241.9 169 71.6
AUR62026362 Chenopodium quinoa HOM05D007078 ORTHO05D008745 4.0e-61 238.8 129 90.7
Ah.08g209880 Amaranthus hybridus HOM05D007078 ORTHO05D008745 2.0e-60 236.5 206 64.1
Mapoly0037s0112 Marchantia polymorpha HOM05D007078 ORTHO05D008745 5.7e-60 235.0 171 69.0
SMO358G0655 Selaginella moellendorffii HOM05D007078 ORTHO05D008745 1.8e-58 229.9 155 69.0
Pp3c24_17730 Physcomitrium patens HOM05D007078 ORTHO05D008745 3.8e-56 222.2 175 65.1
CBR_g32237 Chara braunii HOM05D007078 ORTHO05D008745 2.0e-49 199.9 193 55.4
CDE01G0430 Ceratophyllum demersum HOM05D007078 ORTHO05D008745 4.4e-44 182.2 97 84.5
Oeu006229.1 Olea europaea HOM05D007078 ORTHO05D008745 4.4e-44 182.2 90 93.3
MBI19_g21637_MAGBIO Magnolia biondii HOM05D007078 ORTHO05D008745 2.7e-41 172.9 176 56.8
Cre03.g145207 Chlamydomonas reinhardtii HOM05D007078 ORTHO05D008745 2.3e-40 169.9 147 54.4
Gohir.A08G070800 Gossypium hirsutum HOM05D007078 ORTHO05D008745 3.0e-40 169.5 165 61.2
MCO10G051 Micromonas commoda HOM05D007078 ORTHO05D008745 2.5e-39 166.4 130 60.0
SGA_v2.0_scaffold11G05787 Striga asiatica HOM05D007078 ORTHO05D008745 2.3e-37 159.8 135 60.7
SEGI_07843 Sequoiadendron giganteum HOM05D007078 ORTHO05D008745 3.4e-36 156.0 135 63.7
Actinidia00723 Actinidia chinensis HOM05D007078 ORTHO05D008745 1.6e-33 147.1 74 90.5
HPP92_019174 Vanilla planifolia HOM05D007078 ORTHO05D008745 2.1e-33 146.7 95 77.9
Ca_08589_v3 Cicer arietinum L. HOM05D007078 ORTHO05D008745 6.0e-33 145.2 155 52.9
Zm00001eb287740 Zea mays HOM05D007078 ORTHO05D008745 1.0e-32 144.4 105 71.4
PRCOL_00000964 Prasinoderma coloniale HOM05D007078 ORTHO05D008745 8.6e-32 141.4 142 53.5
PGR142G2005 Punica granatum HOM05D007078 ORTHO05D008745 6.2e-30 135.2 78 87.2
Peaxi162Scf00156g00061 Petunia axillaris HOM05D007078 ORTHO05D008745 8.1e-30 134.8 81 84.0
Actinidia24309 Actinidia chinensis HOM05D007078 ORTHO05D008745 3.0e-24 116.3 67 80.6
Hma1.2p1_0628F.1_g191770 Hydrangea macrophylla HOM05D007078 ORTHO05D008745 8.1e-22 108.2 56 92.9


User provided reference genes

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