Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_7G027280 Cucumis sativus L. HOM05D008619 ORTHO05D000090 1.1e-54 219.5 402 100.0
ClCG09G008330 Citrullus lanatus HOM05D008619 ORTHO05D000090 4.6e-24 117.9 74 74.3
CsaV3_7G027720 Cucumis sativus L. HOM05D008619 ORTHO05D000090 3.9e-23 114.8 220 78.6
MELO3C015722.2 Cucumis melo HOM05D008619 ORTHO05D025208 6.7e-23 114.0 63 87.3
CsaV3_7G027920 Cucumis sativus L. HOM05D008619 ORTHO05D000090 1.7e-21 109.4 74 67.6
MELO3C028898.2 Cucumis melo HOM05D008619 ORTHO05D000090 1.8e-20 105.9 209 82.8
CsaV3_7G027260 Cucumis sativus L. HOM05D008619 ORTHO05D000090 2.2e-18 99.0 72 65.3
Sed0021875 Sechium edule HOM05D008619 ORTHO05D000090 4.2e-17 94.7 212 77.4
CsaV3_7G027240 Cucumis sativus L. HOM05D008619 ORTHO05D000090 2.7e-16 92.0 217 69.1
Sed0025187 Sechium edule HOM05D008619 ORTHO05D000090 2.7e-16 92.0 70 58.6
ClCG09G021760 Citrullus lanatus HOM05D008619 ORTHO05D000090 3.6e-16 91.7 68 61.8
ClCG00G006240 Citrullus lanatus HOM05D008619 ORTHO05D000090 1.8e-15 89.4 181 77.9
ClCG01G008120 Citrullus lanatus HOM05D008619 ORTHO05D000090 8.8e-15 87.0 73 57.5
Sed0010182 Sechium edule HOM05D008619 ORTHO05D000090 8.8e-15 87.0 73 56.2
CsaV3_7G022190 Cucumis sativus L. HOM05D008619 ORTHO05D000090 2.6e-14 85.5 74 56.8
Sed0002057 Sechium edule HOM05D008619 ORTHO05D000090 5.7e-14 84.3 70 54.3
RcHm_v2.0_Chr6g0289221 Rosa chinensis HOM05D000162 ORTHO05D000090 9.7e-14 83.6 70 57.1
MELO3C012708.2 Cucumis melo HOM05D008619 ORTHO05D000090 1.7e-13 82.8 73 56.2
MD05G1203800 Malus domestica HOM05D008619 ORTHO05D000090 1.7e-13 82.8 70 58.6
Sed0014525 Sechium edule HOM05D008619 ORTHO05D000090 6.3e-13 80.9 72 52.8
RcHm_v2.0_Chr6g0289191 Rosa chinensis HOM05D000162 ORTHO05D000090 1.4e-12 79.7 70 54.3
FvH4_2g22260 Fragaria vesca HOM05D000162 ORTHO05D000090 1.8e-12 79.3 70 52.9
Sed0005043 Sechium edule HOM05D008619 ORTHO05D000090 5.3e-12 77.8 62 58.1
Haze_24551 Corylus avellana HOM05D000162 ORTHO05D000090 9.1e-12 77.0 70 54.3
FAN24G2639 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.5e-11 76.3 70 51.4
FAN27G0396 Fragaria x ananassa HOM05D000162 ORTHO05D000090 2.0e-11 75.9 70 50.0
QL04p081370 Quercus lobata HOM05D000162 ORTHO05D000090 3.5e-11 75.1 73 52.1
Prupe.8G230100 Prunus persica HOM05D008619 ORTHO05D000090 5.9e-11 74.3 69 49.3
ClCG01G008220 Citrullus lanatus HOM05D008619 ORTHO05D000090 7.7e-11 73.9 74 50.0
Sed0014539 Sechium edule HOM05D008619 ORTHO05D000090 5.0e-10 71.2 61 52.5
Thecc.01G265100 Theobroma cacao HOM05D008619 ORTHO05D000090 5.0e-10 71.2 70 50.0
PSO585G0011 Papaver somniferum HOM05D018600 ORTHO05D000090 1.4e-09 69.7 62 48.4
QL12p042932 Quercus lobata HOM05D000162 ORTHO05D000090 1.4e-09 69.7 73 50.7
Actinidia33760 Actinidia chinensis HOM05D000162 ORTHO05D000090 5.5e-09 67.8 67 47.8
Hma1.2p1_0172F.1_g076330 Hydrangea macrophylla HOM05D000162 ORTHO05D000090 7.2e-09 67.4 71 47.9
Lj1P60T47 Lonicera japonica HOM05D008619 ORTHO05D000090 9.4e-09 67.0 72 43.1
vmacro02633 Vaccinium macrocarpon HOM05D008619 ORTHO05D000090 9.4e-09 67.0 55 54.5
CSS0034526 Camellia sinensis var. sinensis HOM05D008619 ORTHO05D000090 2.1e-08 65.9 58 50.0
CSS0040127 Camellia sinensis var. sinensis HOM05D008619 ORTHO05D000090 2.1e-08 65.9 58 50.0
Atru.chr6.231 Acer truncatum HOM05D000162 ORTHO05D000090 2.7e-08 65.5 69 43.5
GSVIVG01000757001 Vitis vinifera HOM05D000162 ORTHO05D000090 2.7e-08 65.5 69 47.8
COL.COLO4_20322 Corchorus olitorius HOM05D000162 ORTHO05D000090 3.6e-08 65.1 78 42.3
Sed0018285 Sechium edule HOM05D008619 ORTHO05D000090 3.6e-08 65.1 63 47.6
PSO832G3344 Papaver somniferum HOM05D018600 ORTHO05D000090 4.7e-08 64.7 59 50.8
TWI75G1134 Tripterygium wilfordii HOM05D000162 ORTHO05D000090 4.7e-08 64.7 68 50.0
Nitab4.5_0003279g0010 Nicotiana tabacum HOM05D008619 ORTHO05D000090 6.1e-08 64.3 61 49.2
PSO017G1775 Papaver somniferum HOM05D000162 ORTHO05D000090 6.1e-08 64.3 63 46.0
Ciclev10024138m.g Citrus clementina HOM05D000162 ORTHO05D000090 8.0e-08 63.9 69 47.8
THA.LOC104808603 Tarenaya hassleriana HOM05D000162 ORTHO05D000090 1.4e-07 63.2 75 37.3
CANSAT11G1734 Cannabis sativa HOM05D000162 ORTHO05D000090 1.8e-07 62.8 71 46.5
CANSAT80G2501 Cannabis sativa HOM05D000162 ORTHO05D000090 1.8e-07 62.8 63 50.8
PSO732G0062 Papaver somniferum HOM05D000162 ORTHO05D000090 1.8e-07 62.8 70 44.3
Atru.chr6.396 Acer truncatum HOM05D000162 ORTHO05D000090 2.3e-07 62.4 72 44.4
Atru.chr6.444 Acer truncatum HOM05D000162 ORTHO05D000090 2.3e-07 62.4 72 44.4
BcaNung00275 Brassica carinata HOM05D015738 ORTHO05D018680 2.3e-07 62.4 63 39.7
Nn1g02624 Nelumbo nucifera HOM05D000162 ORTHO05D000090 2.3e-07 62.4 73 38.4
Sed0025833 Sechium edule HOM05D008619 ORTHO05D025208 2.3e-07 62.4 60 46.7
AUR62011921 Chenopodium quinoa HOM05D000162 ORTHO05D000090 3.0e-07 62.0 61 44.3
Atru.chr4.2210 Acer truncatum HOM05D000162 ORTHO05D000090 3.9e-07 61.6 61 41.0
MBI11_g34863_MAGBIO Magnolia biondii HOM05D000162 ORTHO05D000090 3.9e-07 61.6 71 40.8
PSO675G7582 Papaver somniferum HOM05D000162 ORTHO05D000090 5.2e-07 61.2 62 45.2
Sed0014077 Sechium edule HOM05D008619 ORTHO05D000090 5.2e-07 61.2 60 46.7
Nn1g02607 Nelumbo nucifera HOM05D000162 ORTHO05D000090 6.7e-07 60.8 64 39.1
Migut.N00243 Erythranthe guttata HOM05D000162 ORTHO05D000090 8.8e-07 60.5 68 38.2
Nn1g02625 Nelumbo nucifera HOM05D000162 ORTHO05D000090 8.8e-07 60.5 63 44.4
PSO229G0164 Papaver somniferum HOM05D000162 ORTHO05D000090 8.8e-07 60.5 65 43.1
ClCG09G021740 Citrullus lanatus HOM05D016535 ORTHO05D000090 1.1e-06 60.1 56 55.4
THA.LOC104809084 Tarenaya hassleriana HOM05D000162 ORTHO05D000090 1.1e-06 60.1 61 39.3
COL.COLO4_34076 Corchorus olitorius HOM05D000162 ORTHO05D000090 1.5e-06 59.7 68 41.2
Eucgr.K03305 Eucalyptus grandis HOM05D000162 ORTHO05D000090 1.5e-06 59.7 71 40.8
Lsat_1_v5_gn_9_9621 Lactuca sativa HOM05D000162 ORTHO05D000090 1.5e-06 59.7 69 42.0
TAR362G0483 Trochodendron aralioides HOM05D000162 ORTHO05D000090 1.5e-06 59.7 63 39.7
Duzib151G0222 Durio zibethinus HOM05D000162 ORTHO05D000090 2.0e-06 59.3 64 37.5
PSO017G5032 Papaver somniferum HOM05D000162 ORTHO05D000090 2.0e-06 59.3 70 38.6
COL.COLO4_09887 Corchorus olitorius HOM05D000162 ORTHO05D000090 2.6e-06 58.9 69 40.6
COL.COLO4_20165 Corchorus olitorius HOM05D000162 ORTHO05D000090 2.6e-06 58.9 56 44.6
Gorai.005G047000 Gossypium raimondii HOM05D000162 ORTHO05D000090 2.6e-06 58.9 73 35.6
PSO170G1618 Papaver somniferum HOM05D000162 ORTHO05D000090 2.6e-06 58.9 76 36.8
TPR.G18222 Trifolium pratense HOM05D000162 ORTHO05D000090 2.6e-06 58.9 73 39.7
COL.COLO4_21653 Corchorus olitorius HOM05D000162 ORTHO05D000090 3.3e-06 58.5 65 41.5
Gohir.D09G225500 Gossypium hirsutum HOM05D000162 ORTHO05D000090 3.3e-06 58.5 61 39.3
Gorai.006G247100 Gossypium raimondii HOM05D000162 ORTHO05D000090 3.3e-06 58.5 61 39.3
Lj8P598T5 Lonicera japonica HOM05D000162 ORTHO05D000090 3.3e-06 58.5 59 40.7
MBI11_g09871_MAGBIO Magnolia biondii HOM05D000162 ORTHO05D000090 3.3e-06 58.5 70 35.7
PSO170G1605 Papaver somniferum HOM05D044499 ORTHO05D000090 3.3e-06 58.5 62 41.9
THA.LOC104809085 Tarenaya hassleriana HOM05D000162 ORTHO05D000090 3.3e-06 58.5 61 41.0
Cpa.g.sc58.57 Carica papaya HOM05D000162 ORTHO05D000090 4.4e-06 58.2 61 37.7
Sc05g0000860 Simmondsia chinensis HOM05D000162 ORTHO05D000090 4.4e-06 58.2 69 42.0
A01p22160 Brassica napus HOM05D015738 ORTHO05D018680 5.7e-06 57.8 62 37.1
Ciclev10030265m.g Citrus clementina HOM05D012581 ORTHO05D000090 5.7e-06 57.8 57 52.6
COL.COLO4_20303 Corchorus olitorius HOM05D000162 ORTHO05D000090 5.7e-06 57.8 56 42.9
PSO063G5267 Papaver somniferum HOM05D000162 ORTHO05D000090 5.7e-06 57.8 62 41.9
PSO063G6560 Papaver somniferum HOM05D000162 ORTHO05D000090 5.7e-06 57.8 69 42.0
PSO782G5341 Papaver somniferum HOM05D000162 ORTHO05D000090 5.7e-06 57.8 62 41.9
THA.LOC104809083 Tarenaya hassleriana HOM05D000162 ORTHO05D000090 5.7e-06 57.8 61 37.7
Atru.chr5.1765 Acer truncatum HOM05D008619 ORTHO05D000090 7.4e-06 57.4 69 40.6
Atru.chr6.395 Acer truncatum HOM05D000162 ORTHO05D000090 7.4e-06 57.4 61 47.5
PSO063G0380 Papaver somniferum HOM05D000162 ORTHO05D000090 7.4e-06 57.4 69 42.0
PSO063G1965 Papaver somniferum HOM05D000162 ORTHO05D000090 7.4e-06 57.4 62 45.2
TAR629G0197 Trochodendron aralioides HOM05D000162 ORTHO05D000090 7.4e-06 57.4 74 37.8
Thhalv10007095m.g Eutrema salsugineum HOM05D000162 ORTHO05D000090 9.7e-06 57.0 68 41.2
PSO675G0716 Papaver somniferum HOM05D000162 ORTHO05D000090 9.7e-06 57.0 67 43.3
PSO732G0790 Papaver somniferum HOM05D000162 ORTHO05D000090 9.7e-06 57.0 69 40.6
QL03p013240 Quercus lobata HOM05D000162 ORTHO05D000090 9.7e-06 57.0 73 37.0
QL03p013273 Quercus lobata HOM05D000162 ORTHO05D000090 9.7e-06 57.0 69 36.2
Thecc.05G299000 Theobroma cacao HOM05D000162 ORTHO05D000090 9.7e-06 57.0 77 35.1


User provided reference genes

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