Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_7G026790 Cucumis sativus L. HOM05D006769 ORTHO05D008522 4.4e-211 737.6 360 100.0
ClCG09G008260 Citrullus lanatus HOM05D006769 ORTHO05D008522 4.2e-185 651.4 360 89.4
FvH4_2g17880 Fragaria vesca HOM05D006769 ORTHO05D008522 2.2e-125 453.0 367 61.9
Prupe.8G191400 Prunus persica HOM05D006769 ORTHO05D008522 2.2e-125 453.0 365 63.6
FAN24G2350 Fragaria x ananassa HOM05D006769 ORTHO05D008522 1.8e-124 449.9 367 61.6
MD05G1163100 Malus domestica HOM05D006769 ORTHO05D008522 1.8e-124 449.9 372 62.1
FAN15G1712 Fragaria x ananassa HOM05D006769 ORTHO05D008522 4.1e-124 448.7 367 61.0
CANSAT01G2880 Cannabis sativa HOM05D006769 ORTHO05D008522 2.5e-121 439.5 367 63.2
CiPaw.13G054700 Carya illinoinensis HOM05D006769 ORTHO05D008522 3.6e-120 435.6 361 62.0
Potri.002G250400 Populus trichocarpa HOM05D006769 ORTHO05D008522 2.3e-119 433.0 370 60.3
Thecc.01G211800 Theobroma cacao HOM05D006769 ORTHO05D008522 3.0e-119 432.6 368 61.1
Phvul.008G137400 Phaseolus vulgaris HOM05D006769 ORTHO05D008522 1.5e-118 430.3 363 60.3
Gohir.D07G166800 Gossypium hirsutum HOM05D006769 ORTHO05D008522 5.7e-118 428.3 367 60.8
Atru.chr6.1512 Acer truncatum HOM05D006769 ORTHO05D008522 1.3e-117 427.2 402 55.5
Cfa010337 Carpinus fangiana HOM05D006769 ORTHO05D008522 1.3e-117 427.2 369 60.4
Medtr7g052250 Medicago truncatula HOM05D006769 ORTHO05D008522 1.3e-117 427.2 365 60.3
ECA248G0008 Erigeron canadensis HOM05D006769 ORTHO05D008522 8.3e-117 424.5 358 59.8
Manes.12G053000 Manihot esculenta HOM05D006769 ORTHO05D008522 1.8e-116 423.3 373 61.7
Lj1g0001413 Lotus japonicus HOM05D006769 ORTHO05D008522 9.1e-116 421.0 365 58.6
Ca_07395_v3 Cicer arietinum L. HOM05D006769 ORTHO05D008522 1.2e-115 420.6 364 60.2
Hma1.2p1_0161F.1_g071350 Hydrangea macrophylla HOM05D006769 ORTHO05D008522 1.2e-115 420.6 387 56.1
Psat3g151240 Pisum sativum HOM05D006769 ORTHO05D008522 1.6e-115 420.2 363 59.5
RcHm_v2.0_Chr6g0283131 Rosa chinensis HOM05D006769 ORTHO05D008522 2.0e-115 419.9 280 70.4
arahy.Tifrunner.gnm1.ann1.N7FX8W Arachis hypogaea HOM05D006769 ORTHO05D008522 3.5e-115 419.1 362 59.7
PGR044G2601 Punica granatum HOM05D006769 ORTHO05D008522 5.9e-115 418.3 375 58.9
arahy.Tifrunner.gnm1.ann1.ADK8RR Arachis hypogaea HOM05D006769 ORTHO05D008522 1.0e-114 417.5 361 58.4
Gorai.N003700 Gossypium raimondii HOM05D006769 ORTHO05D008522 1.0e-114 417.5 374 59.1
TPR.G26832 Trifolium pratense HOM05D006769 ORTHO05D008522 1.0e-114 417.5 364 58.5
Dinv12798 Davidia involucrata HOM05D006769 ORTHO05D008522 1.7e-114 416.8 406 55.2
QL09p046131 Quercus lobata HOM05D006769 ORTHO05D008522 2.9e-114 416.0 444 52.5
FAN27G3257 Fragaria x ananassa HOM05D006769 ORTHO05D008522 6.6e-114 414.8 340 60.6
Lalb_Chr03g0041161 Lupinus albus HOM05D006769 ORTHO05D008522 1.5e-113 413.7 360 60.3
Glyma.08G344800 Glycine max HOM05D006769 ORTHO05D008522 4.2e-113 412.1 381 57.2
Eucgr.K02091 Eucalyptus grandis HOM05D006769 ORTHO05D008522 2.8e-112 409.5 261 72.4
TWI18G0992 Tripterygium wilfordii HOM05D006769 ORTHO05D008522 2.8e-112 409.5 354 60.2
Duzib138G0404 Durio zibethinus HOM05D006769 ORTHO05D008522 4.7e-112 408.7 347 60.8
HanXRQChr01g0007211 Helianthus annuus HOM05D006769 ORTHO05D008522 1.4e-111 407.1 359 58.5
GSVIVG01006251001 Vitis vinifera HOM05D006769 ORTHO05D008522 1.4e-111 407.1 398 55.5
PSO170G1917 Papaver somniferum HOM05D006769 ORTHO05D008522 4.0e-111 405.6 379 54.9
DCAR_004766 Daucus carota HOM05D006769 ORTHO05D008522 7.5e-110 401.4 370 56.5
Nn1g08265 Nelumbo nucifera HOM05D006769 ORTHO05D008522 2.2e-109 399.8 369 57.2
Sed0011761 Sechium edule HOM05D006769 ORTHO05D008522 1.1e-108 397.5 365 61.4
Sc05g0001770 Simmondsia chinensis HOM05D006769 ORTHO05D008522 4.1e-108 395.6 370 57.3
Aqoxy5G00037 Aquilegia oxysepala HOM05D006769 ORTHO05D008522 2.0e-107 393.3 373 54.7
THA.LOC104819455 Tarenaya hassleriana HOM05D006769 ORTHO05D008522 3.5e-107 392.5 293 65.2
Lj2A1118G65 Lonicera japonica HOM05D006769 ORTHO05D008522 5.9e-107 391.7 445 48.1
MSTRG.12754 Avicennia marina HOM05D006769 ORTHO05D008522 7.8e-107 391.3 401 53.1
Cc01_g16210 Coffea canephora HOM05D006769 ORTHO05D008522 1.0e-106 391.0 408 52.5
Migut.N00662 Erythranthe guttata HOM05D006769 ORTHO05D008522 1.3e-106 390.6 389 55.3
Actinidia30020 Actinidia chinensis HOM05D006769 ORTHO05D008522 3.9e-106 389.0 249 72.7
Hund02792 Selenicereus undatus HOM05D006769 ORTHO05D008522 3.3e-105 386.0 369 55.3
AUR62028711 Chenopodium quinoa HOM05D006769 ORTHO05D008522 8.9e-103 377.9 365 54.0
AUR62008129 Chenopodium quinoa HOM05D006769 ORTHO05D008522 5.8e-102 375.2 367 53.7
CAN.G188.2 Capsicum annuum HOM05D006769 ORTHO05D008522 1.3e-101 374.0 254 68.9
SHI10304 Sapria himalayana HOM05D006769 ORTHO05D008522 1.7e-101 373.6 253 68.0
CARHR294500 Cardamine hirsuta HOM05D006769 ORTHO05D008522 2.2e-101 373.2 260 65.8
AT2G26470 Arabidopsis thaliana HOM05D006769 ORTHO05D008522 4.9e-101 372.1 280 62.5
EL10Ac5g10636 Beta vulgaris HOM05D006769 ORTHO05D008522 1.9e-100 370.2 373 53.1
Ah.11g051100 Amaranthus hybridus HOM05D006769 ORTHO05D008522 4.1e-100 369.0 369 52.8
Aa31LG5G9400 Aethionema arabicum HOM05D006769 ORTHO05D008522 7.0e-100 368.2 354 53.7
AL4G19290 Arabidopsis lyrata HOM05D006769 ORTHO05D008522 1.6e-99 367.1 274 62.8
Carub.0004s0653 Capsella rubella HOM05D006769 ORTHO05D008522 3.5e-99 365.9 279 60.9
TAR365G1082 Trochodendron aralioides HOM05D006769 ORTHO05D008522 4.6e-99 365.5 368 54.1
Nitab4.5_0008509g0020 Nicotiana tabacum HOM05D006769 ORTHO05D008522 1.1e-97 360.9 379 52.5
Sp6g10380 Schrenkiella parvula HOM05D006769 ORTHO05D008522 1.1e-97 360.9 281 60.1
Carub.0004s0639 Capsella rubella HOM05D006769 ORTHO05D008522 2.5e-97 359.8 370 50.3
BcaB08g35324 Brassica carinata HOM05D006769 ORTHO05D008522 3.3e-97 359.4 295 60.0
BcaC07g40819 Brassica carinata HOM05D006769 ORTHO05D008522 3.3e-97 359.4 320 55.3
C08p38120 Brassica napus HOM05D006769 ORTHO05D008522 3.3e-97 359.4 320 55.3
A09p55190 Brassica napus HOM05D006769 ORTHO05D008522 4.3e-97 359.0 323 55.4
BraA09t40927Z Brassica rapa HOM05D006769 ORTHO05D008522 4.3e-97 359.0 323 55.4
Oeu003634.1 Olea europaea HOM05D006769 ORTHO05D008522 2.1e-96 356.7 328 54.9
unitig_37.g12548 Utricularia gibba HOM05D006769 ORTHO05D008522 6.2e-96 355.1 367 51.8
BolC8t51387H Brassica oleracea HOM05D006769 ORTHO05D008522 8.1e-96 354.8 325 54.8
SalBow3G4668 Salvia bowleyana HOM05D006769 ORTHO05D008522 6.8e-95 351.7 390 51.3
Thhalv10003450m.g Eutrema salsugineum HOM05D006769 ORTHO05D008522 2.6e-94 349.7 322 55.0
Rhsim13G0052300 Rhododendron simsii HOM05D006769 ORTHO05D008522 7.5e-94 348.2 357 52.7
ATR0609G088 Amborella trichopoda HOM05D006769 ORTHO05D008522 6.4e-93 345.1 384 50.5
SEGI_34173 Sequoiadendron giganteum HOM05D006769 ORTHO05D008522 1.4e-92 344.0 381 48.6
Lsat_1_v5_gn_5_178440 Lactuca sativa HOM05D006769 ORTHO05D008522 2.8e-88 329.7 357 49.9
vmacro21305 Vaccinium macrocarpon HOM05D006769 ORTHO05D008522 2.6e-86 323.2 395 47.3
HanXRQChr01g0007221 Helianthus annuus HOM05D006769 ORTHO05D008522 1.7e-85 320.5 413 46.5
AagrBONN_evm.TU.Sc2ySwM_344.907 Anthoceros agrestis HOM05D006769 ORTHO05D008522 6.6e-82 308.5 382 45.0
VMungo1383G2812 Vigna mungo HOM05D006769 ORTHO05D008522 1.1e-81 307.8 298 55.0
Gohir.A07G159600 Gossypium hirsutum HOM05D006769 ORTHO05D008522 1.2e-80 304.3 283 58.3
HPP92_009961 Vanilla planifolia HOM05D006769 ORTHO05D008522 6.2e-80 302.0 379 47.5
SMO241G0010 Selaginella moellendorffii HOM05D006769 ORTHO05D008522 5.2e-79 298.9 254 57.5
CSS0037741 Camellia sinensis var. sinensis HOM05D006769 ORTHO05D008522 2.1e-75 287.0 172 76.2
Cpa.g.sc8.80 Carica papaya HOM05D006769 ORTHO05D008522 2.1e-75 287.0 338 50.0
Pp3c12_23250 Physcomitrium patens HOM05D006769 ORTHO05D008522 3.3e-73 279.6 256 52.0
Zm00001eb090430 Zea mays HOM05D006769 ORTHO05D008522 4.2e-68 262.7 257 53.3
Haze_03306 Corylus avellana HOM05D006769 ORTHO05D008522 5.4e-68 262.3 254 55.5
Peaxi162Scf00335g01510 Petunia axillaris HOM05D006769 ORTHO05D008522 7.1e-68 261.9 182 68.7
Ciclev10032230m.g Citrus clementina HOM05D006769 ORTHO05D008522 3.3e-65 253.1 289 50.5
Hma1.2p1_0161F.1_g071340 Hydrangea macrophylla HOM05D006769 ORTHO05D008522 4.3e-65 252.7 280 50.7
CBR_g20401 Chara braunii HOM05D006769 ORTHO05D008522 4.0e-63 246.1 235 50.6
Mapoly0021s0139 Marchantia polymorpha HOM05D006769 ORTHO05D008522 6.9e-55 218.8 181 56.9
Nitab4.5_0000038g0100 Nicotiana tabacum HOM05D006769 ORTHO05D008522 7.1e-52 208.8 351 41.6
SEGI_18025 Sequoiadendron giganteum HOM05D006769 ORTHO05D008522 1.2e-51 208.0 151 60.9
MCO07G255 Micromonas commoda HOM05D006769 ORTHO05D008522 2.4e-47 193.7 239 42.7
Os06g0470800 Oryza sativa ssp. japonica HOM05D006769 ORTHO05D008522 2.6e-46 190.3 178 56.7
CDE09G0834 Ceratophyllum demersum HOM05D006769 ORTHO05D008522 5.9e-46 189.1 286 39.5
Haze_03305 Corylus avellana HOM05D006769 ORTHO05D008522 1.1e-41 174.9 113 72.6
QL09p046008 Quercus lobata HOM05D006769 ORTHO05D008522 4.5e-38 162.9 91 81.3
RcHm_v2.0_Chr6g0283021 Rosa chinensis HOM05D006769 ORTHO05D008522 6.3e-32 142.5 119 59.7
CSS0014368 Camellia sinensis var. sinensis HOM05D006769 ORTHO05D008522 2.4e-31 140.6 234 42.7
PRCOL_00005345 Prasinoderma coloniale HOM05D006769 ORTHO05D008522 4.1e-31 139.8 339 31.3
VMungo1383G3069 Vigna mungo HOM05D006769 ORTHO05D008522 2.0e-30 137.5 87 66.7
Cfa021866 Carpinus fangiana HOM05D006769 ORTHO05D008522 1.4e-28 131.3 229 38.0
Cpa.g.sc8.79 Carica papaya HOM05D006769 ORTHO05D008522 2.1e-27 127.5 84 67.9
Cre09.g410000 Chlamydomonas reinhardtii HOM05D006769 ORTHO05D008522 1.1e-25 121.7 136 45.6
SGA_v2.0_scaffold77G25292 Striga asiatica HOM05D006769 ORTHO05D008522 7.0e-23 112.5 223 37.2
MD10G1152700 Malus domestica HOM05D006769 ORTHO05D008522 8.0e-19 99.0 147 42.2
CDE02G1388 Ceratophyllum demersum HOM05D007934 ORTHO05D010067 1.1e-17 95.1 84 47.6
Prupe.2G270900 Prunus persica HOM05D006769 ORTHO05D008522 1.7e-16 91.3 58 74.1
Prupe.6G190400 Prunus persica HOM05D006769 ORTHO05D008522 4.1e-15 86.7 47 83.0


User provided reference genes

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