Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_7G026110 Cucumis sativus L. HOM05D006384 ORTHO05D007917 7.6e-68 260.4 132 100.0
CsaV3_3G035870 Cucumis sativus L. HOM05D006384 ORTHO05D007917 2.2e-19 99.4 106 56.6
ClCG10G020230 Citrullus lanatus HOM05D006384 ORTHO05D007917 3.2e-18 95.5 98 60.2
MELO3C009346.2 Cucumis melo HOM05D006384 ORTHO05D007917 4.7e-17 91.7 96 60.4
MELO3C032679.2 Cucumis melo HOM05D006384 ORTHO05D007917 2.6e-12 75.9 60 66.7
Sed0012269 Sechium edule HOM05D006384 ORTHO05D007917 3.2e-10 68.9 77 53.2
Thecc.05G063500 Theobroma cacao HOM05D006384 ORTHO05D007917 3.2e-10 68.9 94 46.8
TWI74G0201 Tripterygium wilfordii HOM05D006384 ORTHO05D007917 4.2e-10 68.6 96 46.9
COL.COLO4_26986 Corchorus olitorius HOM05D006384 ORTHO05D001525 4.7e-09 65.1 103 41.7
CiPaw.10G132500 Carya illinoinensis HOM05D006384 ORTHO05D007917 1.4e-08 63.5 77 51.9
QL07p044018 Quercus lobata HOM05D006384 ORTHO05D007917 1.4e-08 63.5 101 46.5
Haze_20571 Corylus avellana HOM05D006384 ORTHO05D007917 2.3e-08 62.8 85 50.6
Duzib093G1098 Durio zibethinus HOM05D006384 ORTHO05D007917 8.8e-08 60.8 117 38.5
Ca_08852_v3 Cicer arietinum L. HOM05D006384 ORTHO05D007917 2.6e-07 59.3 84 45.2
Lalb_Chr20g0112661 Lupinus albus HOM05D006384 ORTHO05D007917 2.6e-07 59.3 88 44.3
Nn2g11540 Nelumbo nucifera HOM05D006384 ORTHO05D007917 4.4e-07 58.5 89 49.4
Gohir.D04G111800 Gossypium hirsutum HOM05D006384 ORTHO05D007917 5.7e-07 58.2 60 50.0
Gorai.009G415700 Gossypium raimondii HOM05D006384 ORTHO05D007917 5.7e-07 58.2 60 50.0
Gohir.A04G072900 Gossypium hirsutum HOM05D006384 ORTHO05D007917 7.5e-07 57.8 91 44.0
Psat3g043320 Pisum sativum HOM05D006384 ORTHO05D007917 7.5e-07 57.8 104 41.3
Manes.09G064200 Manihot esculenta HOM05D006384 ORTHO05D007917 1.3e-06 57.0 87 41.4
Atru.chr8.1840 Acer truncatum HOM05D006384 ORTHO05D007917 1.7e-06 56.6 79 45.6
PGR004G0408 Punica granatum HOM05D006384 ORTHO05D007917 1.7e-06 56.6 82 47.6
Lj2A115T51 Lonicera japonica HOM05D006384 ORTHO05D007917 2.2e-06 56.2 94 39.4
MSTRG.10316 Avicennia marina HOM05D006384 ORTHO05D007917 3.7e-06 55.5 91 39.6
SalBow5G1519 Salvia bowleyana HOM05D006384 ORTHO05D007917 3.7e-06 55.5 75 48.0
SalBow5G1643 Salvia bowleyana HOM05D006384 ORTHO05D007917 3.7e-06 55.5 75 48.0
FvH4_6g16140 Fragaria vesca HOM05D006384 ORTHO05D007917 4.8e-06 55.1 65 47.7
HanXRQChr01g0027531 Helianthus annuus HOM05D006384 ORTHO05D007917 4.8e-06 55.1 79 38.0
TAR623G0498 Trochodendron aralioides HOM05D001475 ORTHO05D001525 4.8e-06 55.1 68 48.5
FAN14G1974 Fragaria x ananassa HOM05D006384 ORTHO05D007917 6.3e-06 54.7 65 47.7
FAN14G4113 Fragaria x ananassa HOM05D006384 ORTHO05D007917 6.3e-06 54.7 65 47.7
Thhalv10016975m.g Eutrema salsugineum HOM05D006384 ORTHO05D007917 8.2e-06 54.3 80 41.2
GSVIVG01025711001 Vitis vinifera HOM05D006384 ORTHO05D007917 8.2e-06 54.3 65 47.7


User provided reference genes

Program Settings