Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_7G025180 Cucumis sativus L. HOM05D004716 ORTHO05D005646 0.0e+00 1189.1 608 100.0
MELO3C023718.2 Cucumis melo HOM05D004716 ORTHO05D005646 0.0e+00 1175.6 608 99.0
ClCG09G009620 Citrullus lanatus HOM05D004716 ORTHO05D005646 0.0e+00 1128.6 610 94.9
Sed0005850 Sechium edule HOM05D004716 ORTHO05D005646 2.7e-301 1038.1 611 88.2
Sed0016522 Sechium edule HOM05D004716 ORTHO05D005646 4.0e-297 1024.2 610 86.7
Prupe.8G028200 Prunus persica HOM05D004716 ORTHO05D005646 1.1e-265 919.8 622 77.2
CiPaw.15G016900 Carya illinoinensis HOM05D004716 ORTHO05D005646 5.8e-264 914.1 612 76.3
Haze_17746 Corylus avellana HOM05D004716 ORTHO05D005646 5.8e-264 914.1 614 77.4
Sed0004003 Sechium edule HOM05D004716 ORTHO05D005646 7.6e-264 913.7 507 90.1
Cfa018329 Carpinus fangiana HOM05D004716 ORTHO05D005646 2.9e-263 911.8 614 77.5
MD05G1023700 Malus domestica HOM05D004716 ORTHO05D005646 3.5e-261 904.8 624 76.0
Manes.18G091200 Manihot esculenta HOM05D004716 ORTHO05D005646 6.0e-261 904.0 614 77.0
CiPaw.16G013500 Carya illinoinensis HOM05D004716 ORTHO05D005646 7.4e-259 897.1 613 75.7
CANSAT25G0539 Cannabis sativa HOM05D004716 ORTHO05D005646 1.8e-257 892.5 631 74.8
Potri.002G069100 Populus trichocarpa HOM05D004716 ORTHO05D005646 2.0e-256 889.0 639 73.6
Potri.005G191300 Populus trichocarpa HOM05D004716 ORTHO05D005646 4.2e-254 881.3 625 73.8
arahy.Tifrunner.gnm1.ann1.LT68UB Arachis hypogaea HOM05D004716 ORTHO05D005646 1.2e-253 879.8 635 74.0
arahy.Tifrunner.gnm1.ann1.RZZD7S Arachis hypogaea HOM05D004716 ORTHO05D005646 1.2e-253 879.8 635 74.0
Atru.chr13.2155 Acer truncatum HOM05D004716 ORTHO05D005646 2.1e-253 879.0 641 73.2
GSVIVG01034512001 Vitis vinifera HOM05D004716 ORTHO05D005646 5.1e-252 874.4 619 73.8
TWI34G0952 Tripterygium wilfordii HOM05D004716 ORTHO05D005646 1.1e-251 873.2 616 74.4
Sabra05G0146100 Salix brachista HOM05D004716 ORTHO05D005646 2.5e-251 872.1 625 74.4
MD10G1024300 Malus domestica HOM05D004716 ORTHO05D005646 3.1e-249 865.1 626 73.6
Dinv41092 Davidia involucrata HOM05D004716 ORTHO05D005646 5.3e-249 864.4 633 72.4
RcHm_v2.0_Chr6g0275661 Rosa chinensis HOM05D004716 ORTHO05D005646 2.0e-248 862.4 622 74.1
Sabra02G0054300 Salix brachista HOM05D004716 ORTHO05D005646 3.4e-248 861.7 639 72.0
Duzib116G0661 Durio zibethinus HOM05D004716 ORTHO05D005646 2.2e-247 859.0 617 74.6
Glyma.10G225500 Glycine max HOM05D004716 ORTHO05D005646 2.5e-246 855.5 613 74.2
Hma1.2p1_0105F.1_g050810 Hydrangea macrophylla HOM05D004716 ORTHO05D005646 4.2e-246 854.7 653 70.3
TWI60G0041 Tripterygium wilfordii HOM05D004716 ORTHO05D005646 1.6e-245 852.8 611 73.3
Gorai.009G253500 Gossypium raimondii HOM05D004716 ORTHO05D005646 2.1e-245 852.4 618 73.1
Duzib041G0148 Durio zibethinus HOM05D004716 ORTHO05D005646 4.6e-245 851.3 617 74.2
FAN27G2333 Fragaria x ananassa HOM05D004716 ORTHO05D005646 4.6e-245 851.3 617 73.6
Gohir.A05G242900 Gossypium hirsutum HOM05D004716 ORTHO05D005646 1.3e-244 849.7 618 72.8
FvH4_2g13910 Fragaria vesca HOM05D004716 ORTHO05D005646 6.7e-244 847.4 617 73.3
FAN15G2444 Fragaria x ananassa HOM05D004716 ORTHO05D005646 3.3e-243 845.1 614 73.1
Dinv25852 Davidia involucrata HOM05D004716 ORTHO05D005646 4.3e-243 844.7 636 71.1
TAR381G1500 Trochodendron aralioides HOM05D004716 ORTHO05D005646 7.4e-243 844.0 649 70.0
FAN20G2258 Fragaria x ananassa HOM05D004716 ORTHO05D005646 2.1e-242 842.4 617 72.9
FAN24G2048 Fragaria x ananassa HOM05D004716 ORTHO05D005646 2.1e-242 842.4 617 73.1
Glyma.20G166300 Glycine max HOM05D004716 ORTHO05D005646 4.8e-242 841.3 613 73.2
Phvul.007G079400 Phaseolus vulgaris HOM05D004716 ORTHO05D005646 4.8e-242 841.3 609 73.6
Thecc.08G149900 Theobroma cacao HOM05D004716 ORTHO05D005646 4.8e-242 841.3 617 73.1
TAR625G0458 Trochodendron aralioides HOM05D004716 ORTHO05D005646 4.8e-242 841.3 642 71.0
COL.COLO4_37837 Corchorus olitorius HOM05D004716 ORTHO05D005646 6.3e-242 840.9 613 73.4
Lalb_Chr01g0009631 Lupinus albus HOM05D004716 ORTHO05D005646 7.6e-240 833.9 636 70.4
Duzib093G0980 Durio zibethinus HOM05D004716 ORTHO05D005646 6.5e-239 830.9 614 72.3
Nn5g28715 Nelumbo nucifera HOM05D004716 ORTHO05D005646 5.5e-238 827.8 639 70.1
Actinidia17798 Actinidia chinensis HOM05D004716 ORTHO05D005646 7.9e-237 823.9 620 70.6
Oeu046025.1 Olea europaea HOM05D004716 ORTHO05D005646 1.0e-236 823.5 626 69.8
Ca_19935_v3 Cicer arietinum L. HOM05D004716 ORTHO05D005646 1.3e-236 823.2 620 72.1
Rhsim06G0090400 Rhododendron simsii HOM05D004716 ORTHO05D005646 3.3e-235 818.5 625 70.1
Aqoxy5G02106 Aquilegia oxysepala HOM05D004716 ORTHO05D005646 4.8e-234 814.7 637 69.7
Lj5g0004042 Lotus japonicus HOM05D004716 ORTHO05D005646 2.0e-232 809.3 621 71.0
QL02p024060 Quercus lobata HOM05D004716 ORTHO05D005646 3.4e-232 808.5 764 60.2
MBI09_g32373_MAGBIO Magnolia biondii HOM05D004716 ORTHO05D005646 1.3e-231 806.6 616 70.8
Gohir.A05G270100 Gossypium hirsutum HOM05D004716 ORTHO05D005646 2.5e-230 802.4 618 71.0
Gorai.009G285100 Gossypium raimondii HOM05D004716 ORTHO05D005646 3.2e-230 802.0 618 71.2
Ciclev10000573m.g Citrus clementina HOM05D004716 ORTHO05D005646 9.4e-230 800.4 644 68.0
Cc10_g14730 Coffea canephora HOM05D004716 ORTHO05D005646 8.8e-228 793.9 641 66.6
Migut.N03224 Erythranthe guttata HOM05D004716 ORTHO05D005646 2.6e-227 792.3 652 65.3
Eucgr.F04241 Eucalyptus grandis HOM05D004716 ORTHO05D005646 1.4e-225 786.6 638 67.1
Nitab4.5_0008759g0020 Nicotiana tabacum HOM05D004716 ORTHO05D005646 2.4e-225 785.8 633 66.4
THA.LOC104809692 Tarenaya hassleriana HOM05D004716 ORTHO05D005646 2.4e-225 785.8 583 71.0
Aa31LG6G9740 Aethionema arabicum HOM05D004716 ORTHO05D005646 3.4e-224 781.9 625 67.8
TPR.G30003 Trifolium pratense HOM05D004716 ORTHO05D005646 8.5e-223 777.3 620 68.2
Nitab4.5_0000032g0020 Nicotiana tabacum HOM05D004716 ORTHO05D005646 1.9e-222 776.2 634 65.6
Gohir.D05G244400 Gossypium hirsutum HOM05D004716 ORTHO05D005646 3.2e-222 775.4 618 68.6
TPR.G36694 Trifolium pratense HOM05D004716 ORTHO05D005646 1.2e-221 773.5 569 71.2
EL10Ac1g01533 Beta vulgaris HOM05D004716 ORTHO05D005646 1.6e-221 773.1 629 67.1
Carub.0001s3471 Capsella rubella HOM05D004716 ORTHO05D005646 1.6e-221 773.1 619 66.7
Ah.05g167860 Amaranthus hybridus HOM05D004716 ORTHO05D005646 3.6e-221 771.9 616 67.9
PSO210G2251 Papaver somniferum HOM05D004716 ORTHO05D005646 6.1e-221 771.2 646 65.6
DCAR_001131 Daucus carota HOM05D004716 ORTHO05D005646 7.9e-221 770.8 624 66.3
Lalb_Chr06g0161551 Lupinus albus HOM05D004716 ORTHO05D005646 2.3e-220 769.2 606 68.6
MSTRG.22371 Avicennia marina HOM05D004716 ORTHO05D005646 8.8e-220 767.3 656 63.4
HanXRQChr10g0279061 Helianthus annuus HOM05D004716 ORTHO05D005646 8.8e-220 767.3 634 66.7
Medtr1g098940 Medicago truncatula HOM05D004716 ORTHO05D005646 8.8e-220 767.3 627 67.8
Gohir.D05G272200 Gossypium hirsutum HOM05D004716 ORTHO05D005646 2.6e-219 765.8 618 69.1
PGR044G2101 Punica granatum HOM05D004716 ORTHO05D005646 5.7e-219 764.6 627 65.1
AUR62013572 Chenopodium quinoa HOM05D004716 ORTHO05D005646 9.7e-219 763.8 636 65.4
Sopen04g027280 Solanum pennellii HOM05D004716 ORTHO05D005646 5.3e-217 758.1 640 63.4
AL1G51810 Arabidopsis lyrata HOM05D004716 ORTHO05D005646 1.2e-216 756.9 618 66.5
SalBow7G0781 Salvia bowleyana HOM05D004716 ORTHO05D005646 1.2e-216 756.9 618 65.2
Peaxi162Scf00765g00315 Petunia axillaris HOM05D004716 ORTHO05D005646 2.6e-216 755.7 628 63.9
Thhalv10011324m.g Eutrema salsugineum HOM05D004716 ORTHO05D005646 7.7e-216 754.2 628 64.8
CAN.G268.7 Capsicum annuum HOM05D004716 ORTHO05D005646 1.3e-215 753.4 649 62.1
SGA_v2.0_scaffold25G11175 Striga asiatica HOM05D004716 ORTHO05D005646 2.5e-214 749.2 652 63.5
AT1G43690 Arabidopsis thaliana HOM05D004716 ORTHO05D005646 3.2e-214 748.8 617 65.6
Sp1g32700 Schrenkiella parvula HOM05D004716 ORTHO05D005646 5.5e-214 748.0 629 64.7
AUR62026717 Chenopodium quinoa HOM05D004716 ORTHO05D005646 2.7e-213 745.7 613 65.1
Lsat_1_v5_gn_6_99641 Lactuca sativa HOM05D004716 ORTHO05D005646 2.3e-212 742.7 624 64.9
BcaC08g42816 Brassica carinata HOM05D004716 ORTHO05D005646 8.8e-212 740.7 610 64.9
C06p00280 Brassica napus HOM05D004716 ORTHO05D005646 8.8e-212 740.7 610 64.9
PSO238G0051 Papaver somniferum HOM05D004716 ORTHO05D005646 7.5e-211 737.6 645 62.5
A10p07790 Brassica napus HOM05D004716 ORTHO05D005646 1.7e-210 736.5 610 63.8
BcaB07g33979 Brassica carinata HOM05D004716 ORTHO05D005646 4.8e-210 734.9 620 63.9
Lj7A371T50 Lonicera japonica HOM05D004716 ORTHO05D005646 6.3e-210 734.6 566 68.2
BraSC36t46025Z Brassica rapa HOM05D004716 ORTHO05D005646 8.2e-210 734.2 610 63.6
ECA246G4589 Erigeron canadensis HOM05D004716 ORTHO05D005646 1.2e-208 730.3 620 65.0
Solyc04g071320.4 Solanum lycopersicum HOM05D004716 ORTHO05D005646 3.5e-208 728.8 640 61.2
Nn1g06102 Nelumbo nucifera HOM05D004716 ORTHO05D005646 6.8e-204 714.5 488 75.0
CARHR035580 Cardamine hirsuta HOM05D004716 ORTHO05D005646 2.7e-200 702.6 619 61.6
unitig_62.g23528 Utricularia gibba HOM05D004716 ORTHO05D005646 3.4e-195 685.6 638 59.9
CDE08G0143 Ceratophyllum demersum HOM05D004716 ORTHO05D005646 1.3e-194 683.7 617 61.3
CSS0049856 Camellia sinensis var. sinensis HOM05D004716 ORTHO05D005646 3.1e-193 679.1 459 75.2
SalBow6G6163 Salvia bowleyana HOM05D004716 ORTHO05D005646 5.0e-191 671.8 682 56.2
Lj4C695G10 Lonicera japonica HOM05D004716 ORTHO05D005646 2.8e-189 666.0 611 60.6
Zm00001eb422340 Zea mays HOM05D004716 ORTHO05D005646 6.8e-188 661.4 635 57.8
Migut.C01013 Erythranthe guttata HOM05D004716 ORTHO05D005646 2.9e-186 656.0 618 57.8
Cpa.g.sc21.190 Carica papaya HOM05D004716 ORTHO05D005646 2.7e-184 649.4 457 74.2
Ca_25988_v3 Cicer arietinum L. HOM05D004716 ORTHO05D005646 1.5e-182 643.7 397 79.1
Oeu011938.1 Olea europaea HOM05D004716 ORTHO05D005646 1.9e-182 643.3 625 59.8
SGA_v2.0_scaffold24G10374 Striga asiatica HOM05D004716 ORTHO05D005646 2.3e-175 619.8 624 56.2
SHI09390 Sapria himalayana HOM05D004716 ORTHO05D005646 1.5e-174 617.1 821 47.0
HPP92_019355 Vanilla planifolia HOM05D004716 ORTHO05D005646 4.7e-173 612.1 556 61.5
ATR0772G093 Amborella trichopoda HOM05D004716 ORTHO05D005646 2.9e-170 602.8 459 66.0
CDE06G2375 Ceratophyllum demersum HOM05D004716 ORTHO05D005646 2.8e-165 586.3 613 54.8
SMO331G0079 Selaginella moellendorffii HOM05D004716 ORTHO05D005646 5.2e-164 582.0 614 52.6
Sc02g0004170 Simmondsia chinensis HOM05D004716 ORTHO05D005646 2.0e-163 580.1 455 66.4
Mapoly0014s0164 Marchantia polymorpha HOM05D004716 ORTHO05D005646 5.4e-161 572.0 659 48.6
Oeu014493.1 Olea europaea HOM05D004716 ORTHO05D005646 1.6e-160 570.5 357 78.7
Psat6g193200 Pisum sativum HOM05D004716 ORTHO05D005646 1.8e-156 557.0 315 84.1
Pp3c5_6660 Physcomitrium patens HOM05D004716 ORTHO05D005646 9.3e-153 544.7 645 49.0
Pp3c6_18530 Physcomitrium patens HOM05D004716 ORTHO05D005646 7.8e-152 541.6 647 48.5
AagrBONN_evm.TU.Sc2ySwM_344.4417 Anthoceros agrestis HOM05D004716 ORTHO05D005646 8.7e-151 538.1 679 47.0
Psat6g193040 Pisum sativum HOM05D004716 ORTHO05D005646 1.1e-148 531.2 300 83.0
vmacro21155 Vaccinium macrocarpon HOM05D004716 ORTHO05D005646 1.2e-139 501.1 315 76.8
Zm00001eb422260 Zea mays HOM05D004716 ORTHO05D005646 5.3e-132 475.7 315 74.3
Os04g0421800 Oryza sativa ssp. japonica HOM05D004716 ORTHO05D005646 2.4e-124 450.3 299 73.2
CBR_g11170 Chara braunii HOM05D004716 ORTHO05D005646 6.5e-122 442.2 556 46.0
HanXRQChr10g0277841 Helianthus annuus HOM05D004716 ORTHO05D005646 2.2e-109 400.6 304 70.1
Zm00001eb422280 Zea mays HOM05D004716 ORTHO05D005646 8.8e-103 378.6 257 71.2
Zm00001eb422320 Zea mays HOM05D004716 ORTHO05D005646 8.8e-103 378.6 257 71.2
Actinidia10653 Actinidia chinensis HOM05D004716 ORTHO05D005646 1.6e-64 251.5 225 62.2
PRCOL_00002924 Prasinoderma coloniale HOM05D004716 ORTHO05D005646 1.5e-57 228.4 343 39.7
VMungo0464G1352 Vigna mungo HOM05D004716 ORTHO05D005646 2.3e-50 204.5 239 55.6
Cpa.g.sc21.191 Carica papaya HOM05D004716 ORTHO05D005646 4.9e-45 186.8 167 70.7
ATR0772G018 Amborella trichopoda HOM05D004716 ORTHO05D005646 1.6e-32 145.2 191 49.7
CAN.G309.90 Capsicum annuum HOM05D004716 ORTHO05D005646 4.8e-32 143.7 179 47.5
Cre06.g286600 Chlamydomonas reinhardtii HOM05D004716 ORTHO05D005646 9.9e-30 136.0 287 34.5
Actinidia10651 Actinidia chinensis HOM05D004716 ORTHO05D005646 1.2e-27 129.0 162 54.3
Actinidia13988 Actinidia chinensis HOM05D004716 ORTHO05D005646 3.5e-27 127.5 88 67.0
PRCOL_00004133 Prasinoderma coloniale HOM05D004716 ORTHO05D005646 4.6e-27 127.1 303 33.7
Ca_25987_v3 Cicer arietinum L. HOM05D004716 ORTHO05D005646 5.6e-17 93.6 131 53.4
HanXRQChr10g0277851 Helianthus annuus HOM05D004716 ORTHO05D005646 1.3e-16 92.4 106 58.5
TAR636G3535 Trochodendron aralioides HOM05D004716 ORTHO05D005646 5.3e-15 87.0 92 62.0
CSS0021208 Camellia sinensis var. sinensis HOM05D004716 ORTHO05D005646 9.0e-15 86.3 140 47.9
Oeu014494.1 Olea europaea HOM05D004716 ORTHO05D005646 9.0e-15 86.3 149 46.3
SEGI_31186 Sequoiadendron giganteum HOM05D004716 ORTHO05D005646 8.4e-13 79.7 155 41.9
Psat6g193080 Pisum sativum HOM05D000257 ORTHO05D008537 2.7e-11 74.7 67 61.2
PGSC0003DMG401024092 Solanum tuberosum HOM05D004716 ORTHO05D005646 7.7e-06 56.6 161 34.8
Ca_26438_v3 Cicer arietinum L. HOM05D004716 ORTHO05D005646 1.0e-05 56.2 135 40.7


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