Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_7G024330 Cucumis sativus L. HOM05D007473 ORTHO05D009459 1.2e-52 209.5 102 100.0
ClCG09G010330 Citrullus lanatus HOM05D007473 ORTHO05D009459 5.0e-51 204.1 102 97.1
MELO3C023649.2 Cucumis melo HOM05D007473 ORTHO05D009459 1.1e-50 203.0 102 96.1
Sed0021533 Sechium edule HOM05D007473 ORTHO05D009459 9.7e-47 189.9 102 90.2
Prupe.8G051200 Prunus persica HOM05D007473 ORTHO05D009459 1.5e-34 149.4 99 77.8
MD05G1038600 Malus domestica HOM05D007473 ORTHO05D009459 8.0e-33 143.7 98 76.5
Atru.chr13.1869 Acer truncatum HOM05D007473 ORTHO05D009459 1.0e-32 143.3 100 75.0
Haze_17885 Corylus avellana HOM05D007473 ORTHO05D009459 2.3e-32 142.1 103 71.8
Hma1.2p1_0510F.1_g168850 Hydrangea macrophylla HOM05D007473 ORTHO05D009459 2.3e-32 142.1 99 75.8
Cfa018218 Carpinus fangiana HOM05D007473 ORTHO05D009459 3.0e-32 141.7 99 72.7
Potri.013G116100 Populus trichocarpa HOM05D007473 ORTHO05D009459 5.2e-32 141.0 99 72.7
GSVIVG01036821001 Vitis vinifera HOM05D007473 ORTHO05D009459 5.2e-32 141.0 99 73.7
MD10G1044400 Malus domestica HOM05D007473 ORTHO05D009459 8.8e-32 140.2 99 74.7
Thecc.08G199100 Theobroma cacao HOM05D007473 ORTHO05D009459 1.2e-31 139.8 98 74.5
Ah.05g172820 Amaranthus hybridus HOM05D007473 ORTHO05D009459 1.5e-31 139.4 97 73.2
QL09p016421 Quercus lobata HOM05D007473 ORTHO05D009459 4.4e-31 137.9 99 71.7
Ciclev10003143m.g Citrus clementina HOM05D007473 ORTHO05D009459 5.7e-31 137.5 98 72.4
QL02p034734 Quercus lobata HOM05D007473 ORTHO05D009459 5.7e-31 137.5 99 71.7
Gohir.A09G117600 Gossypium hirsutum HOM05D007473 ORTHO05D009459 9.8e-31 136.7 98 71.4
Gohir.D09G114400 Gossypium hirsutum HOM05D007473 ORTHO05D009459 9.8e-31 136.7 98 71.4
Gorai.006G132300 Gossypium raimondii HOM05D007473 ORTHO05D009459 9.8e-31 136.7 98 71.4
Sabra19G0097100 Salix brachista HOM05D007473 ORTHO05D009459 2.2e-30 135.6 100 72.0
Sc23g0001050 Simmondsia chinensis HOM05D007473 ORTHO05D009459 4.8e-30 134.4 100 70.0
Manes.02G188900 Manihot esculenta HOM05D007473 ORTHO05D009459 8.3e-30 133.7 98 72.4
Duzib116G0725 Durio zibethinus HOM05D007473 ORTHO05D009459 1.1e-29 133.3 98 71.4
COL.COLO4_36790 Corchorus olitorius HOM05D007473 ORTHO05D009459 1.4e-29 132.9 98 70.4
AUR62004677 Chenopodium quinoa HOM05D000623 ORTHO05D007511 3.1e-29 131.7 100 66.0
Nitab4.5_0000051g0010 Nicotiana tabacum HOM05D007473 ORTHO05D009459 3.1e-29 131.7 98 70.4
Oeu054499.1 Olea europaea HOM05D007473 ORTHO05D009459 3.1e-29 131.7 98 68.4
AUR62023594 Chenopodium quinoa HOM05D007473 ORTHO05D009459 4.1e-29 131.3 100 66.0
Duzib211G0408 Durio zibethinus HOM05D007473 ORTHO05D009459 4.1e-29 131.3 98 67.3
MSTRG.25424 Avicennia marina HOM05D007473 ORTHO05D009459 5.4e-29 131.0 96 71.9
Aqoxy5G02488 Aquilegia oxysepala HOM05D007473 ORTHO05D009459 7.0e-29 130.6 98 66.3
Nitab4.5_0004159g0050 Nicotiana tabacum HOM05D007473 ORTHO05D009459 7.0e-29 130.6 98 69.4
Potri.019G086700 Populus trichocarpa HOM05D007473 ORTHO05D009459 9.1e-29 130.2 100 69.0
EL10Ac3g06462 Beta vulgaris HOM05D007473 ORTHO05D009459 1.2e-28 129.8 94 69.1
CANSAT25G2275 Cannabis sativa HOM05D007473 ORTHO05D009459 2.0e-28 129.0 99 68.7
TWI59G1410 Tripterygium wilfordii HOM05D007473 ORTHO05D009459 2.0e-28 129.0 99 67.7
Eucgr.F04148 Eucalyptus grandis HOM05D007473 ORTHO05D009459 4.5e-28 127.9 97 69.1
Nn1g08531 Nelumbo nucifera HOM05D007473 ORTHO05D009459 5.9e-28 127.5 98 66.3
Cpa.g.sc66.113 Carica papaya HOM05D007473 ORTHO05D009459 7.7e-28 127.1 100 68.0
Solyc11g013850.2 Solanum lycopersicum HOM05D007473 ORTHO05D009459 1.0e-27 126.7 98 68.4
Sopen11g008770 Solanum pennellii HOM05D007473 ORTHO05D009459 1.0e-27 126.7 98 68.4
Migut.C01206 Erythranthe guttata HOM05D007473 ORTHO05D009459 1.3e-27 126.3 95 69.5
Manes.18G098100 Manihot esculenta HOM05D007473 ORTHO05D009459 1.3e-27 126.3 94 71.3
Phvul.004G085900 Phaseolus vulgaris HOM05D007473 ORTHO05D009459 1.3e-27 126.3 103 65.0
TAR628G1168 Trochodendron aralioides HOM05D007473 ORTHO05D009459 1.3e-27 126.3 99 66.7
Glyma.16G157600 Glycine max HOM05D007473 ORTHO05D009459 2.3e-27 125.6 103 64.1
Oeu017869.1 Olea europaea HOM05D007473 ORTHO05D009459 2.3e-27 125.6 98 67.3
CiPaw.15G006600 Carya illinoinensis HOM05D007473 ORTHO05D009459 3.8e-27 124.8 99 68.7
Glyma.02G075700 Glycine max HOM05D007473 ORTHO05D009459 5.0e-27 124.4 103 64.1
EL10Ac8g20095 Beta vulgaris HOM05D007473 ORTHO05D009459 6.5e-27 124.0 94 67.0
PGSC0003DMG400030214 Solanum tuberosum HOM05D007473 ORTHO05D009459 8.6e-27 123.6 98 67.3
Lalb_Chr01g0009921 Lupinus albus HOM05D007473 ORTHO05D009459 2.5e-26 122.1 102 63.7
Lalb_Chr19g0129841 Lupinus albus HOM05D007473 ORTHO05D009459 2.5e-26 122.1 102 64.7
TPR.G30581 Trifolium pratense HOM05D007473 ORTHO05D009459 4.2e-26 121.3 101 69.3
EL10Ac1g01496 Beta vulgaris HOM05D007473 ORTHO05D009459 5.5e-26 120.9 94 66.0
Sp5g26890 Schrenkiella parvula HOM05D007473 ORTHO05D009459 5.5e-26 120.9 100 63.0
SpUn0020_0080 Schrenkiella parvula HOM05D007473 ORTHO05D009459 5.5e-26 120.9 100 63.0
BolC6t39645H Brassica oleracea HOM05D007473 ORTHO05D009459 9.5e-26 120.2 100 64.0
Thhalv10019351m.g Eutrema salsugineum HOM05D007473 ORTHO05D009459 9.5e-26 120.2 100 63.0
VMungo0464G1647 Vigna mungo HOM05D007473 ORTHO05D009459 1.2e-25 119.8 104 63.5
Sabra13G0098400 Salix brachista HOM05D007473 ORTHO05D009459 1.6e-25 119.4 94 67.0
SalBow7G0569 Salvia bowleyana HOM05D007473 ORTHO05D009459 1.6e-25 119.4 98 66.3
BraA07t31366Z Brassica rapa HOM05D007473 ORTHO05D009459 2.1e-25 119.0 100 64.0
SGA_v2.0_scaffold25G11079 Striga asiatica HOM05D007473 ORTHO05D009459 2.1e-25 119.0 95 69.5
AT1G71865 Arabidopsis thaliana HOM05D007473 ORTHO05D009459 3.6e-25 118.2 97 63.9
Cc00_g18070 Coffea canephora HOM05D007473 ORTHO05D009459 3.6e-25 118.2 98 63.3
BcaC08g46619 Brassica carinata HOM05D007473 ORTHO05D009459 6.1e-25 117.5 100 63.0
A07p38010 Brassica napus HOM05D007473 ORTHO05D009459 6.1e-25 117.5 100 63.0
Lj5g0014701 Lotus japonicus HOM05D007473 ORTHO05D009459 6.1e-25 117.5 103 65.0
AL2G31450 Arabidopsis lyrata HOM05D007473 ORTHO05D009459 8.0e-25 117.1 97 62.9
Carub.0002s1863 Capsella rubella HOM05D007473 ORTHO05D009459 2.3e-24 115.5 97 61.9
CARHR290890 Cardamine hirsuta HOM05D007473 ORTHO05D009459 3.0e-24 115.2 97 62.9
Medtr1g097080 Medicago truncatula HOM05D007473 ORTHO05D009459 3.0e-24 115.2 101 68.3
Aa31LG4G8770 Aethionema arabicum HOM05D007473 ORTHO05D009459 4.0e-24 114.8 97 62.9
CSS0009978 Camellia sinensis var. sinensis HOM05D007473 ORTHO05D009459 6.8e-24 114.0 87 71.3
Psat6g188360 Pisum sativum HOM05D007473 ORTHO05D009459 8.9e-24 113.6 101 64.4
ATR0584G170 Amborella trichopoda HOM05D007473 ORTHO05D009459 4.4e-23 111.3 98 58.2
BcaC08g46617 Brassica carinata HOM05D007473 ORTHO05D009459 8.3e-22 107.1 100 61.0
Peaxi162Scf00476g00621 Petunia axillaris HOM05D007473 ORTHO05D009459 8.3e-22 107.1 89 64.0
Os01g0871350 Oryza sativa ssp. japonica HOM05D007473 ORTHO05D009459 1.1e-21 106.7 98 56.1
A07p30540 Brassica napus HOM05D007473 ORTHO05D009459 1.4e-21 106.3 100 59.0
Zm00001eb289250 Zea mays HOM05D007473 ORTHO05D009459 1.4e-21 106.3 99 58.6
BcaC08g45751 Brassica carinata HOM05D007473 ORTHO05D009459 1.8e-21 105.9 100 59.0
BolC6t38636H Brassica oleracea HOM05D007473 ORTHO05D009459 1.8e-21 105.9 100 59.0
C06p35300 Brassica napus HOM05D007473 ORTHO05D009459 2.4e-21 105.5 100 59.0
PSO017G2761 Papaver somniferum HOM05D007473 ORTHO05D009459 3.1e-21 105.1 96 58.3
THA.LOC104800103 Tarenaya hassleriana HOM05D007473 ORTHO05D009459 2.0e-20 102.4 97 60.8
BraA07t30689Z Brassica rapa HOM05D007473 ORTHO05D009459 2.7e-20 102.1 100 57.0
EL10Ac8g20080 Beta vulgaris HOM05D007473 ORTHO05D009459 6.6e-19 97.4 90 61.1
Hund27069 Selenicereus undatus HOM05D007473 ORTHO05D009459 1.1e-18 96.7 78 61.5
SEGI_38346 Sequoiadendron giganteum HOM05D007473 ORTHO05D009459 1.8e-16 89.4 97 52.6
Zm00001eb348670 Zea mays HOM05D007473 ORTHO05D009459 5.2e-16 87.8 87 57.5
EL10Ac8g20008 Beta vulgaris HOM05D007473 ORTHO05D009459 8.9e-16 87.0 75 62.7
EL10Ac7g17167 Beta vulgaris HOM05D007473 ORTHO05D009459 1.5e-15 86.3 71 64.8
EL10Ac4g08661 Beta vulgaris HOM05D007473 ORTHO05D009459 4.9e-14 81.3 94 53.2
Aa31LG7G6620 Aethionema arabicum HOM05D007473 ORTHO05D009459 6.4e-14 80.9 80 56.2
BcaB03g15623 Brassica carinata HOM05D007473 ORTHO05D009459 5.6e-10 67.8 102 44.1
Hund16811 Selenicereus undatus HOM05D007473 ORTHO05D009459 6.2e-09 64.3 62 56.5
SEGI_24301 Sequoiadendron giganteum HOM05D007473 ORTHO05D009459 6.8e-08 60.8 105 38.1


User provided reference genes

Program Settings