Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_7G024290 Cucumis sativus L. HOM05D004531 ORTHO05D005484 2.2e-123 445.7 227 100.0
MELO3C023654.2 Cucumis melo HOM05D004531 ORTHO05D005484 7.6e-108 394.0 236 89.0
ClCG09G010350 Citrullus lanatus HOM05D004531 ORTHO05D005484 2.2e-91 339.3 220 80.5
ClCG11G010890 Citrullus lanatus HOM05D004531 ORTHO05D005484 3.3e-87 325.5 230 76.1
Sed0018245 Sechium edule HOM05D004531 ORTHO05D005484 4.3e-87 325.1 230 76.1
MELO3C008757.2 Cucumis melo HOM05D004531 ORTHO05D005484 6.2e-86 321.2 230 75.2
CsaV3_2G009570 Cucumis sativus L. HOM05D004531 ORTHO05D005484 6.9e-85 317.8 230 74.8
Prupe.4G200900 Prunus persica HOM05D004531 ORTHO05D005484 2.1e-73 279.6 230 66.1
Nitab4.5_0000646g0260 Nicotiana tabacum HOM05D004531 ORTHO05D005484 2.7e-73 279.3 230 63.5
Prupe.8G106900 Prunus persica HOM05D004531 ORTHO05D005484 6.0e-73 278.1 230 65.7
Manes.11G057800 Manihot esculenta HOM05D004531 ORTHO05D005484 1.0e-72 277.3 230 62.6
GSVIVG01029836001 Vitis vinifera HOM05D004531 ORTHO05D005484 1.8e-72 276.6 230 63.0
PGR042G0151 Punica granatum HOM05D004531 ORTHO05D005484 3.0e-72 275.8 230 63.9
CAN.G641.37 Capsicum annuum HOM05D004531 ORTHO05D005484 3.9e-72 275.4 230 62.6
RcHm_v2.0_Chr5g0037141 Rosa chinensis HOM05D004531 ORTHO05D005484 3.9e-72 275.4 230 63.0
TWI77G0822 Tripterygium wilfordii HOM05D004531 ORTHO05D005484 3.3e-71 272.3 230 62.2
COL.COLO4_07074 Corchorus olitorius HOM05D004531 ORTHO05D005484 1.3e-70 270.4 230 62.6
Gohir.D10G227700 Gossypium hirsutum HOM05D004531 ORTHO05D005484 1.3e-70 270.4 230 63.0
Lj7A661T48 Lonicera japonica HOM05D004531 ORTHO05D005484 1.3e-70 270.4 230 63.0
MD11G1228700 Malus domestica HOM05D004531 ORTHO05D005484 1.3e-70 270.4 229 63.8
Solyc10g079430.2 Solanum lycopersicum HOM05D004531 ORTHO05D005484 1.3e-70 270.4 230 60.9
Cc06_g18540 Coffea canephora HOM05D004531 ORTHO05D005484 1.6e-70 270.0 230 62.2
Gorai.011G260100 Gossypium raimondii HOM05D004531 ORTHO05D005484 1.6e-70 270.0 230 63.0
PGSC0003DMG400008162 Solanum tuberosum HOM05D004531 ORTHO05D005484 2.8e-70 269.2 230 60.9
CANSAT56G3883 Cannabis sativa HOM05D004531 ORTHO05D005484 4.8e-70 268.5 230 61.7
Gohir.A06G180300 Gossypium hirsutum HOM05D004531 ORTHO05D005484 4.8e-70 268.5 230 62.6
Dinv37065 Davidia involucrata HOM05D004531 ORTHO05D005484 6.2e-70 268.1 230 62.6
Eucgr.A02172 Eucalyptus grandis HOM05D004531 ORTHO05D005484 1.1e-69 267.3 230 61.3
Atru.chr2.471 Acer truncatum HOM05D004531 ORTHO05D005484 1.8e-69 266.5 230 62.6
Duzib248G1029 Durio zibethinus HOM05D004531 ORTHO05D005484 1.8e-69 266.5 230 60.9
Thecc.05G127100 Theobroma cacao HOM05D004531 ORTHO05D005484 1.8e-69 266.5 230 61.7
MD15G1425000 Malus domestica HOM05D004531 ORTHO05D005484 3.1e-69 265.8 230 63.0
Nn5g28465 Nelumbo nucifera HOM05D004531 ORTHO05D005484 3.1e-69 265.8 230 60.0
Peaxi162Scf00002g10416 Petunia axillaris HOM05D004531 ORTHO05D005484 3.1e-69 265.8 263 55.9
Potri.016G024300 Populus trichocarpa HOM05D004531 ORTHO05D005484 3.1e-69 265.8 230 60.9
FvH4_3g21660 Fragaria vesca HOM05D004531 ORTHO05D005484 4.1e-69 265.4 230 61.3
Hma1.2p1_0341F.1_g130530 Hydrangea macrophylla HOM05D004531 ORTHO05D005484 5.3e-69 265.0 230 61.3
VMungo0251G1523 Vigna mungo HOM05D004531 ORTHO05D005484 6.9e-69 264.6 230 59.1
Glyma.05G122300 Glycine max HOM05D004531 ORTHO05D005484 9.0e-69 264.2 230 60.4
CiPaw.08G117500 Carya illinoinensis HOM05D004531 ORTHO05D005484 1.2e-68 263.8 230 60.4
Nitab4.5_0000082g0350 Nicotiana tabacum HOM05D004531 ORTHO05D005484 1.5e-68 263.5 230 60.4
SalBow6G4182 Salvia bowleyana HOM05D004531 ORTHO05D005484 2.6e-68 262.7 230 60.4
Glyma.08G077300 Glycine max HOM05D004531 ORTHO05D005484 3.4e-68 262.3 230 59.1
Nitab4.5_0010736g0010 Nicotiana tabacum HOM05D004531 ORTHO05D005484 5.8e-68 261.5 230 60.4
Phvul.002G203400 Phaseolus vulgaris HOM05D004531 ORTHO05D005484 1.3e-67 260.4 230 58.7
Sabra16G0021800 Salix brachista HOM05D004531 ORTHO05D005484 1.3e-67 260.4 230 59.6
Sc15g0002670 Simmondsia chinensis HOM05D004531 ORTHO05D005484 3.8e-67 258.8 230 58.7
MSTRG.6389 Avicennia marina HOM05D004531 ORTHO05D005484 5.0e-67 258.5 230 59.1
CSS0023033 Camellia sinensis var. sinensis HOM05D004531 ORTHO05D005484 6.5e-67 258.1 230 60.0
Ciclev10012657m.g Citrus clementina HOM05D004531 ORTHO05D005484 8.4e-67 257.7 230 60.4
Lj6g0006960 Lotus japonicus HOM05D004531 ORTHO05D005484 1.4e-66 256.9 230 58.7
Lalb_Chr13g0291551 Lupinus albus HOM05D004531 ORTHO05D005484 1.9e-66 256.5 230 57.4
MD11G1228500 Malus domestica HOM05D004531 ORTHO05D005484 1.9e-66 256.5 250 58.0
ECA238G4589 Erigeron canadensis HOM05D004531 ORTHO05D005484 1.2e-65 253.8 230 60.4
FAN11G1137 Fragaria x ananassa HOM05D004531 ORTHO05D005484 1.6e-65 253.4 252 56.0
HanXRQChr14g0437741 Helianthus annuus HOM05D004531 ORTHO05D005484 2.1e-65 253.1 230 60.0
MBI13_g30229_MAGBIO Magnolia biondii HOM05D004531 ORTHO05D005484 3.5e-65 252.3 239 58.2
vmacro07599 Vaccinium macrocarpon HOM05D004531 ORTHO05D005484 1.0e-64 250.8 230 58.7
Ciclev10010418m.g Citrus clementina HOM05D004531 ORTHO05D005484 1.3e-64 250.4 230 58.3
SGA_v2.0_scaffold69G23138 Striga asiatica HOM05D004531 ORTHO05D005484 1.8e-64 250.0 232 57.3
Medtr4g094380 Medicago truncatula HOM05D004531 ORTHO05D005484 3.0e-64 249.2 230 56.1
Os01g0810000 Oryza sativa ssp. japonica HOM05D004531 ORTHO05D005484 3.0e-64 249.2 230 58.3
Cpa.g.sc115.24 Carica papaya HOM05D004531 ORTHO05D005484 3.9e-64 248.8 230 57.0
arahy.Tifrunner.gnm1.ann1.8UG22X Arachis hypogaea HOM05D004531 ORTHO05D005484 5.1e-64 248.4 232 58.2
Ca_18320_v3 Cicer arietinum L. HOM05D004531 ORTHO05D005484 6.7e-64 248.1 230 56.1
arahy.Tifrunner.gnm1.ann1.35U2WI Arachis hypogaea HOM05D004531 ORTHO05D005484 1.1e-63 247.3 232 58.2
Migut.J01686 Erythranthe guttata HOM05D004531 ORTHO05D005484 4.3e-63 245.4 232 56.5
THA.LOC104820245 Tarenaya hassleriana HOM05D004531 ORTHO05D005484 7.4e-63 244.6 232 58.2
TPR.G23804 Trifolium pratense HOM05D004531 ORTHO05D005484 7.4e-63 244.6 231 58.0
EL10Ac9g22646 Beta vulgaris HOM05D004531 ORTHO05D005484 1.6e-62 243.4 230 57.0
AUR62034356 Chenopodium quinoa HOM05D004531 ORTHO05D005484 1.6e-62 243.4 230 57.8
TAR374G0360 Trochodendron aralioides HOM05D004531 ORTHO05D005484 1.6e-62 243.4 230 57.8
AUR62022353 Chenopodium quinoa HOM05D004531 ORTHO05D005484 2.2e-62 243.0 230 57.8
DCAR_020613 Daucus carota HOM05D004531 ORTHO05D005484 2.8e-62 242.7 230 56.5
Sabra16G0030200 Salix brachista HOM05D004531 ORTHO05D005484 2.8e-62 242.7 220 58.2
HPP92_027481 Vanilla planifolia HOM05D004531 ORTHO05D005484 4.8e-62 241.9 230 54.8
Aqoxy2G03324 Aquilegia oxysepala HOM05D004531 ORTHO05D005484 8.2e-62 241.1 230 56.5
unitig_746.g26802 Utricularia gibba HOM05D004531 ORTHO05D005484 8.2e-62 241.1 230 56.1
EL10Ac1g01672 Beta vulgaris HOM05D004531 ORTHO05D005484 2.4e-61 239.6 230 56.5
BcaB02g08172 Brassica carinata HOM05D004531 ORTHO05D005484 3.1e-61 239.2 230 55.2
Psat7g095600 Pisum sativum HOM05D004531 ORTHO05D005484 3.1e-61 239.2 230 56.1
arahy.Tifrunner.gnm1.ann1.JM9XLQ Arachis hypogaea HOM05D004531 ORTHO05D005484 5.3e-61 238.4 232 57.3
A04p01660 Brassica napus HOM05D004531 ORTHO05D005484 1.2e-60 237.3 230 54.3
RhsimUnG0021500 Rhododendron simsii HOM05D004531 ORTHO05D005484 1.5e-60 236.9 254 52.8
BraA09t40693Z Brassica rapa HOM05D004531 ORTHO05D005484 2.6e-60 236.1 230 53.9
C04p32210 Brassica napus HOM05D004531 ORTHO05D005484 3.4e-60 235.7 230 53.9
BcaC07g42771 Brassica carinata HOM05D004531 ORTHO05D005484 5.9e-60 235.0 230 53.9
A09p52640 Brassica napus HOM05D004531 ORTHO05D005484 5.9e-60 235.0 230 53.9
BolC8t51130H Brassica oleracea HOM05D004531 ORTHO05D005484 7.7e-60 234.6 230 53.5
Gohir.A08G129500 Gossypium hirsutum HOM05D004531 ORTHO05D005484 7.7e-60 234.6 235 57.0
BcaC02g10151 Brassica carinata HOM05D004531 ORTHO05D005484 1.0e-59 234.2 230 53.5
C08p35370 Brassica napus HOM05D004531 ORTHO05D005484 2.2e-59 233.0 230 53.0
Thhalv10006222m.g Eutrema salsugineum HOM05D004531 ORTHO05D005484 3.8e-59 232.3 230 53.5
Aa31LG3G11700 Aethionema arabicum HOM05D004531 ORTHO05D005484 6.5e-59 231.5 231 53.7
Sp5g02860 Schrenkiella parvula HOM05D004531 ORTHO05D005484 6.5e-59 231.5 230 53.5
SpUn0080_0040 Schrenkiella parvula HOM05D004531 ORTHO05D005484 6.5e-59 231.5 230 53.5
Lsat_1_v5_gn_2_52561 Lactuca sativa HOM05D004531 ORTHO05D005484 2.5e-58 229.6 220 56.8
PSO210G4508 Papaver somniferum HOM05D004531 ORTHO05D005484 5.5e-58 228.4 231 55.8
Haze_23723 Corylus avellana HOM05D004531 ORTHO05D005484 9.4e-58 227.6 307 46.6
AL5G42600 Arabidopsis lyrata HOM05D004531 ORTHO05D005484 3.6e-57 225.7 230 53.0
Carub.0005s2711 Capsella rubella HOM05D004531 ORTHO05D005484 7.9e-57 224.6 230 53.0
PSO210G2223 Papaver somniferum HOM05D004531 ORTHO05D005484 1.0e-56 224.2 231 56.3
Zm00001eb369240 Zea mays HOM05D004531 ORTHO05D005484 2.3e-56 223.0 213 57.3
AT3G60360 Arabidopsis thaliana HOM05D004531 ORTHO05D005484 2.5e-55 219.5 230 51.3
CARHR170680 Cardamine hirsuta HOM05D004531 ORTHO05D005484 5.7e-55 218.4 230 50.4
SGA_v2.0_scaffold105G30334 Striga asiatica HOM05D004531 ORTHO05D005484 6.5e-51 204.9 199 54.3
QL09p051267 Quercus lobata HOM05D004531 ORTHO05D005484 1.1e-50 204.1 360 40.0
TAR636G0629 Trochodendron aralioides HOM05D004531 ORTHO05D005484 1.6e-49 200.3 183 60.1
Nitab4.5_0002805g0150 Nicotiana tabacum HOM05D004531 ORTHO05D005484 1.1e-47 194.1 164 62.2
RhsimUnG0117400 Rhododendron simsii HOM05D004531 ORTHO05D005484 5.7e-47 191.8 318 41.8
SMO367G0994 Selaginella moellendorffii HOM05D004531 ORTHO05D005484 1.3e-46 190.7 230 45.7
Duzib052G0496 Durio zibethinus HOM05D004531 ORTHO05D005484 4.8e-46 188.7 166 58.4
Sopen10g030070 Solanum pennellii HOM05D004531 ORTHO05D005484 2.4e-45 186.4 164 59.1
FAN16G0044 Fragaria x ananassa HOM05D004531 ORTHO05D005484 2.0e-44 183.3 164 59.1
CDE07G2032 Ceratophyllum demersum HOM05D004531 ORTHO05D005484 2.9e-43 179.5 179 54.2
AagrBONN_evm.TU.Sc2ySwM_228.1021 Anthoceros agrestis HOM05D004531 ORTHO05D005484 5.0e-43 178.7 231 45.5
FAN21G3808 Fragaria x ananassa HOM05D004531 ORTHO05D005484 3.6e-41 172.6 147 61.2
Mapoly0074s0052 Marchantia polymorpha HOM05D004531 ORTHO05D005484 6.1e-41 171.8 230 43.9
Cfa002196 Carpinus fangiana HOM05D004531 ORTHO05D005484 1.8e-40 170.2 140 62.9
Ah.13g077510 Amaranthus hybridus HOM05D004531 ORTHO05D005484 2.3e-40 169.9 225 45.3
Hund15691 Selenicereus undatus HOM05D004531 ORTHO05D005484 1.5e-39 167.2 141 60.3
Hund22289 Selenicereus undatus HOM05D004531 ORTHO05D005484 5.3e-37 158.7 283 38.5
ATR1096G053 Amborella trichopoda HOM05D004531 ORTHO05D005484 9.4e-34 147.9 138 52.9
Dinv14546 Davidia involucrata HOM05D004531 ORTHO05D005484 4.7e-33 145.6 117 59.8
MCO16G699 Micromonas commoda HOM05D004531 ORTHO05D005484 1.0e-32 144.4 242 39.7
Pp3c3_27620 Physcomitrium patens HOM05D004531 ORTHO05D005484 1.0e-32 144.4 229 39.3
Ca_08745_v3 Cicer arietinum L. HOM05D004531 ORTHO05D005484 3.0e-32 142.9 214 42.1
Oeu020249.1 Olea europaea HOM05D004531 ORTHO05D005484 5.2e-32 142.1 111 61.3
CDE07G0548 Ceratophyllum demersum HOM05D004531 ORTHO05D005484 8.3e-30 134.8 139 53.2
BraA04t15890Z Brassica rapa HOM05D004531 ORTHO05D005484 2.2e-27 126.7 139 49.6
Carub.0007s2695 Capsella rubella HOM05D004531 ORTHO05D005484 1.1e-26 124.4 176 43.2
FAN25G0149 Fragaria x ananassa HOM05D004531 ORTHO05D005484 1.5e-26 124.0 116 56.0
CBR_g26482 Chara braunii HOM05D004531 ORTHO05D005484 9.4e-26 121.3 245 36.7
PRCOL_00003072 Prasinoderma coloniale HOM05D004531 ORTHO05D005484 4.7e-25 119.0 265 34.0
Cre13.g573050 Chlamydomonas reinhardtii HOM05D004531 ORTHO05D005484 1.3e-22 110.9 292 31.8
Pp3s222_10 Physcomitrium patens HOM05D004531 ORTHO05D005484 3.1e-21 106.3 144 42.4
Potri.006G026002 Populus trichocarpa HOM05D004531 ORTHO05D005484 7.7e-20 101.7 85 55.3
Psat3g051800 Pisum sativum HOM05D004531 ORTHO05D005484 5.6e-18 95.5 89 55.1
MD11G1228400 Malus domestica HOM05D004531 ORTHO05D005484 2.8e-17 93.2 122 47.5
THA.LOC104802556 Tarenaya hassleriana HOM05D004531 ORTHO05D005484 1.7e-14 84.0 122 41.0
CSS0027948 Camellia sinensis var. sinensis HOM05D004531 ORTHO05D005484 8.3e-14 81.6 97 49.5
ATR1096G046 Amborella trichopoda HOM05D004531 ORTHO05D005484 9.2e-13 78.2 69 55.1
Zm00001eb180730 Zea mays HOM05D004531 ORTHO05D005484 1.2e-12 77.8 63 60.3
Zm00001eb262530 Zea mays HOM05D000031 ORTHO05D445172 3.5e-12 76.3 71 56.3
PSO210G0815 Papaver somniferum HOM05D004531 ORTHO05D005484 1.5e-10 70.9 79 48.1
ECA238G1549 Erigeron canadensis HOM05D004531 ORTHO05D005484 1.6e-09 67.4 58 60.3
TWI38G0613 Tripterygium wilfordii HOM05D004531 ORTHO05D005484 1.6e-09 67.4 103 41.7
Haze_26248 Corylus avellana HOM05D004531 ORTHO05D005484 6.2e-09 65.5 72 44.4
Cfa023089 Carpinus fangiana HOM05D004531 ORTHO05D005484 8.0e-09 65.1 153 35.3
CDE07G1261 Ceratophyllum demersum HOM05D004531 ORTHO05D005484 1.0e-08 64.7 61 55.7
Gohir.A06G180400 Gossypium hirsutum HOM05D004531 ORTHO05D005484 3.1e-08 63.2 54 59.3
SalBow8G3341 Salvia bowleyana HOM05D004531 ORTHO05D005484 4.0e-08 62.8 81 50.6
Oeu059360.1 Olea europaea HOM05D004531 ORTHO05D005484 3.4e-07 59.7 80 42.5
TAR633G0556 Trochodendron aralioides HOM05D004531 ORTHO05D005484 1.7e-06 57.4 45 57.8


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