Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_7G022230 Cucumis sativus L. HOM05D004862 ORTHO05D005841 2.2e-293 1011.5 490 100.0
MELO3C012691.2 Cucumis melo HOM05D004862 ORTHO05D005841 3.1e-276 954.5 469 98.5
ClCG09G014610 Citrullus lanatus HOM05D004862 ORTHO05D005841 4.1e-268 927.5 469 94.9
Sed0027136 Sechium edule HOM05D004862 ORTHO05D005841 3.7e-253 877.9 469 90.2
Haze_23539 Corylus avellana HOM05D004862 ORTHO05D005841 2.1e-232 808.9 468 82.5
MD12G1223100 Malus domestica HOM05D004862 ORTHO05D005841 2.1e-232 808.9 456 82.9
Cfa010154 Carpinus fangiana HOM05D004862 ORTHO05D005841 4.7e-232 807.7 468 82.7
CiPaw.13G145700 Carya illinoinensis HOM05D004862 ORTHO05D005841 7.5e-230 800.4 475 81.3
Dinv24234 Davidia involucrata HOM05D004862 ORTHO05D005841 1.4e-228 796.2 472 80.1
Prupe.6G329700 Prunus persica HOM05D004862 ORTHO05D005841 3.9e-226 788.1 469 79.3
CSS0027197 Camellia sinensis var. sinensis HOM05D004862 ORTHO05D005841 5.6e-225 784.3 484 77.1
CSS0014529 Camellia sinensis var. sinensis HOM05D004862 ORTHO05D005841 9.5e-225 783.5 484 77.1
Duzib132G0210 Durio zibethinus HOM05D004862 ORTHO05D005841 2.1e-224 782.3 461 80.7
arahy.Tifrunner.gnm1.ann1.34Q84K Arachis hypogaea HOM05D004862 ORTHO05D005841 2.8e-224 781.9 469 80.2
arahy.Tifrunner.gnm1.ann1.WE1E8S Arachis hypogaea HOM05D004862 ORTHO05D005841 6.2e-224 780.8 469 80.0
RcHm_v2.0_Chr3g0454151 Rosa chinensis HOM05D004862 ORTHO05D005841 9.9e-222 773.5 469 78.3
Manes.14G165200 Manihot esculenta HOM05D004862 ORTHO05D005841 1.7e-221 772.7 454 80.8
FAN05G4126 Fragaria x ananassa HOM05D004862 ORTHO05D005841 2.9e-221 771.9 471 77.3
TWI23G0249 Tripterygium wilfordii HOM05D004862 ORTHO05D005841 6.4e-221 770.8 473 75.9
FvH4_6g05370 Fragaria vesca HOM05D004862 ORTHO05D005841 8.4e-221 770.4 471 77.3
Thecc.02G156500 Theobroma cacao HOM05D004862 ORTHO05D005841 1.1e-220 770.0 461 79.2
FAN14G4788 Fragaria x ananassa HOM05D004862 ORTHO05D005841 1.9e-220 769.2 471 77.1
Gohir.A01G012300 Gossypium hirsutum HOM05D004862 ORTHO05D005841 2.4e-220 768.8 461 78.5
Cc02_g18820 Coffea canephora HOM05D004862 ORTHO05D005841 3.2e-220 768.5 473 77.8
FAN14G5837 Fragaria x ananassa HOM05D004862 ORTHO05D005841 7.1e-220 767.3 471 76.9
COL.COLO4_33088 Corchorus olitorius HOM05D004862 ORTHO05D005841 9.2e-220 766.9 476 77.1
Ciclev10015108m.g Citrus clementina HOM05D004862 ORTHO05D005841 1.6e-219 766.1 469 78.7
Gorai.002G015300 Gossypium raimondii HOM05D004862 ORTHO05D005841 2.1e-219 765.8 461 78.3
FAN02G3155 Fragaria x ananassa HOM05D004862 ORTHO05D005841 3.5e-219 765.0 471 76.6
Rhsim11G0133700 Rhododendron simsii HOM05D004862 ORTHO05D005841 3.5e-219 765.0 464 78.0
Glyma.08G075600 Glycine max HOM05D004862 ORTHO05D005841 1.7e-218 762.7 469 78.7
Nn1g06191 Nelumbo nucifera HOM05D004862 ORTHO05D005841 3.0e-218 761.9 472 76.9
Gohir.D01G013500 Gossypium hirsutum HOM05D004862 ORTHO05D005841 5.1e-218 761.1 461 77.9
Glyma.05G121000 Glycine max HOM05D004862 ORTHO05D005841 6.6e-218 760.8 458 78.6
Ca_29818_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 8.7e-218 760.4 463 78.2
Gohir.D13G060400 Gossypium hirsutum HOM05D004862 ORTHO05D005841 8.7e-218 760.4 458 78.8
FAN09G3019 Fragaria x ananassa HOM05D004862 ORTHO05D005841 1.1e-217 760.0 471 76.4
Lj5A244T54 Lonicera japonica HOM05D004862 ORTHO05D005841 1.1e-217 760.0 454 78.0
Lalb_Chr07g0189371 Lupinus albus HOM05D004862 ORTHO05D005841 1.5e-217 759.6 467 79.0
CANSAT54G0577 Cannabis sativa HOM05D004862 ORTHO05D005841 5.6e-217 757.7 460 79.8
PGR042G3925 Punica granatum HOM05D004862 ORTHO05D005841 7.3e-217 757.3 457 78.8
Potri.001G207000 Populus trichocarpa HOM05D004862 ORTHO05D005841 1.3e-216 756.5 454 78.9
Gohir.A13G061500 Gossypium hirsutum HOM05D004862 ORTHO05D005841 2.1e-216 755.7 462 77.9
DCAR_021834 Daucus carota HOM05D004862 ORTHO05D005841 2.8e-216 755.4 468 76.5
CAN.G1.65 Capsicum annuum HOM05D004862 ORTHO05D005841 3.6e-216 755.0 469 76.5
Phvul.002G205600 Phaseolus vulgaris HOM05D004862 ORTHO05D005841 3.6e-216 755.0 458 78.8
QL01p020593 Quercus lobata HOM05D004862 ORTHO05D005841 3.6e-216 755.0 565 66.7
Gorai.013G068500 Gossypium raimondii HOM05D004862 ORTHO05D005841 6.2e-216 754.2 472 76.7
Nitab4.5_0005079g0020 Nicotiana tabacum HOM05D004862 ORTHO05D005841 6.2e-216 754.2 480 75.4
Lj4g0019477 Lotus japonicus HOM05D004862 ORTHO05D005841 1.8e-215 752.7 469 77.0
Medtr4g094315 Medicago truncatula HOM05D004862 ORTHO05D005841 6.9e-215 750.7 468 77.4
Solyc10g047120.2 Solanum lycopersicum HOM05D004862 ORTHO05D005841 2.0e-214 749.2 458 77.7
Sopen10g017280 Solanum pennellii HOM05D004862 ORTHO05D005841 5.8e-214 747.7 458 77.1
Nitab4.5_0000078g0200 Nicotiana tabacum HOM05D004862 ORTHO05D005841 9.9e-214 746.9 465 76.6
SGA_v2.0_scaffold332G48937 Striga asiatica HOM05D004862 ORTHO05D005841 1.7e-213 746.1 453 78.6
VMungo0251G1232 Vigna mungo HOM05D004862 ORTHO05D005841 2.2e-213 745.7 493 74.8
Psat7g096360 Pisum sativum HOM05D004862 ORTHO05D005841 3.8e-213 745.0 468 77.1
Aqoxy6G00342 Aquilegia oxysepala HOM05D004862 ORTHO05D005841 3.2e-212 741.9 453 76.8
Lsat_1_v5_gn_9_117961 Lactuca sativa HOM05D004862 ORTHO05D005841 7.1e-212 740.7 456 77.0
CDE02G2941 Ceratophyllum demersum HOM05D004862 ORTHO05D005841 1.6e-211 739.6 455 76.7
THA.LOC104818254 Tarenaya hassleriana HOM05D004862 ORTHO05D005841 1.6e-211 739.6 454 77.5
Oeu000228.1 Olea europaea HOM05D004862 ORTHO05D005841 4.6e-211 738.0 454 76.4
Lj9A317G73 Lonicera japonica HOM05D004862 ORTHO05D005841 2.3e-210 735.7 463 74.9
Sc09g0004450 Simmondsia chinensis HOM05D004862 ORTHO05D005841 3.9e-210 734.9 469 75.1
MSTRG.16558 Avicennia marina HOM05D004862 ORTHO05D005841 8.7e-210 733.8 455 75.8
PGSC0003DMG400017691 Solanum tuberosum HOM05D004862 ORTHO05D005841 1.1e-209 733.4 507 70.6
HanXRQChr03g0065771 Helianthus annuus HOM05D004862 ORTHO05D005841 1.9e-209 732.6 457 74.6
Hund06875 Selenicereus undatus HOM05D004862 ORTHO05D005841 1.9e-209 732.6 465 75.3
Thhalv10004120m.g Eutrema salsugineum HOM05D004862 ORTHO05D005841 2.5e-209 732.3 459 76.3
ATR1136G066 Amborella trichopoda HOM05D004862 ORTHO05D005841 3.3e-209 731.9 477 73.8
PSO675G5038 Papaver somniferum HOM05D004862 ORTHO05D005841 2.8e-208 728.8 457 75.1
PSO541G6054 Papaver somniferum HOM05D004862 ORTHO05D005841 1.8e-207 726.1 462 74.9
vmacro01803 Vaccinium macrocarpon HOM05D004862 ORTHO05D005841 2.4e-207 725.7 561 65.2
AL5G15180 Arabidopsis lyrata HOM05D004862 ORTHO05D005841 6.9e-207 724.2 459 75.4
Carub.0005s0438 Capsella rubella HOM05D004862 ORTHO05D005841 1.5e-206 723.0 459 75.4
Aa31LG2G6120 Aethionema arabicum HOM05D004862 ORTHO05D005841 2.0e-206 722.6 456 75.4
Sp2g15560 Schrenkiella parvula HOM05D004862 ORTHO05D005841 2.6e-206 722.2 459 74.9
Sabra01G0160300 Salix brachista HOM05D004862 ORTHO05D005841 3.4e-206 721.8 544 67.1
AT3G26410 Arabidopsis thaliana HOM05D004862 ORTHO05D005841 4.5e-206 721.5 459 75.2
CARHR147430 Cardamine hirsuta HOM05D004862 ORTHO05D005841 9.9e-206 720.3 463 75.2
ECA240G2004 Erigeron canadensis HOM05D004862 ORTHO05D005841 9.9e-206 720.3 446 76.0
A06p42030 Brassica napus HOM05D004862 ORTHO05D005841 2.2e-205 719.2 456 75.4
BolC2t11381H Brassica oleracea HOM05D004862 ORTHO05D005841 2.2e-205 719.2 459 74.9
BraA06t27120Z Brassica rapa HOM05D004862 ORTHO05D005841 2.2e-205 719.2 456 75.4
Migut.B00646 Erythranthe guttata HOM05D004862 ORTHO05D005841 2.9e-205 718.8 453 74.8
BcaB07g30229 Brassica carinata HOM05D004862 ORTHO05D005841 3.8e-205 718.4 454 75.8
C07p35450 Brassica napus HOM05D004862 ORTHO05D005841 1.1e-204 716.8 456 75.0
BolC7t44069H Brassica oleracea HOM05D004862 ORTHO05D005841 1.1e-204 716.8 456 75.0
AUR62003397 Chenopodium quinoa HOM05D004862 ORTHO05D005841 1.9e-204 716.1 473 72.3
MBI06_g20970_MAGBIO Magnolia biondii HOM05D004862 ORTHO05D005841 2.4e-204 715.7 467 74.3
BraA02t08465Z Brassica rapa HOM05D004862 ORTHO05D005841 7.1e-204 714.1 454 75.1
Os02g0556400 Oryza sativa ssp. japonica HOM05D004862 ORTHO05D005841 1.0e-202 710.3 472 72.5
EL10Ac4g08938 Beta vulgaris HOM05D004862 ORTHO05D005841 1.8e-202 709.5 459 72.8
Ah.04g163010 Amaranthus hybridus HOM05D004862 ORTHO05D005841 8.7e-202 707.2 459 73.9
GSVIVG01029751001 Vitis vinifera HOM05D004862 ORTHO05D005841 1.9e-201 706.1 430 78.8
BcaC03g17366 Brassica carinata HOM05D004862 ORTHO05D005841 2.5e-201 705.7 483 71.2
SalBow5G3806 Salvia bowleyana HOM05D004862 ORTHO05D005841 2.8e-200 702.2 543 64.1
SalBow5G4932 Salvia bowleyana HOM05D004862 ORTHO05D005841 2.2e-197 692.6 568 61.3
Eucgr.G00660 Eucalyptus grandis HOM05D004862 ORTHO05D005841 2.1e-192 676.0 400 79.5
BcaNung06886 Brassica carinata HOM05D004862 ORTHO05D005841 5.8e-190 667.9 465 70.3
C02p53070 Brassica napus HOM05D004862 ORTHO05D005841 5.8e-190 667.9 483 68.9
SHI16537 Sapria himalayana HOM05D004862 ORTHO05D005841 1.0e-189 667.2 481 66.7
Ciclev10008412m.g Citrus clementina HOM05D004862 ORTHO05D005841 3.2e-188 662.1 448 72.8
AUR62004780 Chenopodium quinoa HOM05D004862 ORTHO05D005841 2.3e-186 656.0 528 62.3
Peaxi162Scf00003g03739 Petunia axillaris HOM05D004862 ORTHO05D005841 8.7e-186 654.1 404 77.0
SEGI_34202 Sequoiadendron giganteum HOM05D004862 ORTHO05D005841 1.5e-177 626.7 429 70.2
CsaV3_7G014980 Cucumis sativus L. HOM05D004862 ORTHO05D005841 1.8e-175 619.8 296 99.7
Mapoly0006s0193 Marchantia polymorpha HOM05D004862 ORTHO05D005841 6.9e-175 617.8 478 62.6
A02p34570 Brassica napus HOM05D004862 ORTHO05D005841 7.7e-174 614.4 385 76.4
TAR116G0002 Trochodendron aralioides HOM05D004862 ORTHO05D005841 5.5e-172 608.2 364 78.8
SMO115G0021 Selaginella moellendorffii HOM05D004862 ORTHO05D005841 3.0e-170 602.4 459 63.0
HPP92_004639 Vanilla planifolia HOM05D004862 ORTHO05D005841 1.5e-169 600.1 373 75.3
Pp3c13_18080 Physcomitrium patens HOM05D004862 ORTHO05D005841 3.3e-169 599.0 459 60.8
HPP92_004630 Vanilla planifolia HOM05D004862 ORTHO05D005841 8.2e-168 594.3 373 74.8
Atru.chr6.1121 Acer truncatum HOM05D004862 ORTHO05D005841 7.0e-167 591.3 349 81.4
CBR_g37214 Chara braunii HOM05D004862 ORTHO05D005841 2.0e-158 563.1 481 57.2
TPR.G31479 Trifolium pratense HOM05D004862 ORTHO05D005841 4.5e-158 562.0 342 77.2
Cpa.g.sc845.1 Carica papaya HOM05D004862 ORTHO05D005841 2.0e-153 546.6 300 86.3
FAN05G4337 Fragaria x ananassa HOM05D004862 ORTHO05D005841 4.8e-152 542.0 318 80.8
TAR628G0283 Trochodendron aralioides HOM05D004862 ORTHO05D005841 4.1e-151 538.9 316 81.0
Zm00001eb243830 Zea mays HOM05D004862 ORTHO05D005841 5.0e-141 505.4 302 79.5
C02p53050 Brassica napus HOM05D004862 ORTHO05D005841 6.1e-139 498.4 298 80.5
BolC2t11366H Brassica oleracea HOM05D004862 ORTHO05D005841 3.0e-138 496.1 304 79.6
BcaC03g17340 Brassica carinata HOM05D004862 ORTHO05D005841 6.8e-138 495.0 340 72.1
SEGI_00112 Sequoiadendron giganteum HOM05D004862 ORTHO05D005841 1.1e-132 477.6 323 71.5
CsaV3_UNG189490 Cucumis sativus L. HOM05D004862 ORTHO05D005841 2.9e-128 463.0 222 99.5
C02p52870 Brassica napus HOM05D004862 ORTHO05D005841 2.1e-123 446.8 298 74.8
MCO05G740 Micromonas commoda HOM05D004862 ORTHO05D005841 9.9e-97 358.2 486 41.4
Cre08.g359100 Chlamydomonas reinhardtii HOM05D004862 ORTHO05D005841 1.2e-94 351.3 387 46.8
CsaV3_7G015000 Cucumis sativus L. HOM05D004862 ORTHO05D005841 1.2e-89 334.7 159 98.7
CsaV3_UNG187480 Cucumis sativus L. HOM05D004862 ORTHO05D005841 1.2e-89 334.7 159 98.7
Ca_29817_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 2.2e-88 330.5 189 84.1
CsaV3_7G014960 Cucumis sativus L. HOM05D004862 ORTHO05D005841 5.5e-87 325.9 159 97.5
unitig_26.g9584 Utricularia gibba HOM05D004862 ORTHO05D005841 4.6e-86 322.8 228 65.4
PRCOL_00003583 Prasinoderma coloniale HOM05D004862 ORTHO05D005841 6.0e-86 322.4 434 41.9
Ca_25384_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 3.1e-74 283.5 165 83.6
unitig_26.g9585 Utricularia gibba HOM05D004862 ORTHO05D005841 2.2e-67 260.8 135 84.4
Cfa021801 Carpinus fangiana HOM05D004862 ORTHO05D005841 6.5e-56 222.6 415 35.9
CsaV3_UNG197500 Cucumis sativus L. HOM05D004862 ORTHO05D005841 7.2e-55 219.2 106 100.0
CsaV3_7G014970 Cucumis sativus L. HOM05D004862 ORTHO05D005841 8.5e-48 195.7 94 97.9
CsaV3_7G015010 Cucumis sativus L. HOM05D004862 ORTHO05D005841 1.9e-47 194.5 93 98.9
Ca_31280_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 1.8e-42 177.9 106 78.3
AagrBONN_evm.TU.Sc2ySwM_344.4621 Anthoceros agrestis HOM05D004862 ORTHO05D005841 5.5e-39 166.4 139 55.4
BolC2t11379H Brassica oleracea HOM05D004862 ORTHO05D005841 1.6e-38 164.9 111 74.8
Potri.003G022650 Populus trichocarpa HOM05D004862 ORTHO05D005841 2.7e-33 147.5 91 73.6
CsaV3_7G014950 Cucumis sativus L. HOM05D004862 ORTHO05D005841 1.0e-29 135.6 65 100.0
TAR628G0087 Trochodendron aralioides HOM05D004862 ORTHO05D005841 6.1e-22 109.8 67 74.6
Actinidia00239 Actinidia chinensis HOM05D004862 ORTHO05D005841 4.0e-21 107.1 87 59.8
Potri.003G022701 Populus trichocarpa HOM05D004862 ORTHO05D005841 7.5e-20 102.8 76 68.4
Cfa010153 Carpinus fangiana HOM05D004862 ORTHO05D005841 5.6e-15 86.7 57 77.2
unitig_26.g9586 Utricularia gibba HOM05D004862 ORTHO05D005841 3.5e-09 67.4 43 74.4
Dinv28090 Davidia involucrata HOM05D000259 ORTHO05D000155 3.3e-07 60.8 35 74.3
MCO05G371 Micromonas commoda HOM05D004862 ORTHO05D267887 4.7e-06 57.0 130 33.8


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