Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_7G021520 Cucumis sativus L. HOM05D006765 ORTHO05D008554 3.1e-187 658.3 329 100.0
MELO3C013197.2 Cucumis melo HOM05D006765 ORTHO05D008554 1.2e-159 566.6 331 89.4
ClCG09G021580 Citrullus lanatus HOM05D006765 ORTHO05D008554 1.1e-139 500.4 348 77.0
Sed0017860 Sechium edule HOM05D006765 ORTHO05D008554 3.4e-109 399.1 307 72.0
Prupe.6G029100 Prunus persica HOM05D006765 ORTHO05D008554 8.5e-76 288.1 324 51.9
Sed0007098 Sechium edule HOM05D006765 ORTHO05D008554 1.2e-74 284.3 242 64.5
Manes.01G004100 Manihot esculenta HOM05D006765 ORTHO05D008554 7.9e-74 281.6 337 48.4
FAN11G3685 Fragaria x ananassa HOM05D006765 ORTHO05D008554 1.9e-72 276.9 337 50.1
FvH4_3g42180 Fragaria vesca HOM05D006765 ORTHO05D008554 3.3e-72 276.2 337 50.4
QL08p002606 Quercus lobata HOM05D006765 ORTHO05D008554 4.3e-72 275.8 335 49.3
Cfa021898 Carpinus fangiana HOM05D006765 ORTHO05D008554 2.2e-71 273.5 326 50.0
RcHm_v2.0_Chr5g0075451 Rosa chinensis HOM05D006765 ORTHO05D008554 1.8e-70 270.4 339 48.4
CSS0016155 Camellia sinensis var. sinensis HOM05D006765 ORTHO05D008554 4.5e-69 265.8 357 49.9
FAN25G2031 Fragaria x ananassa HOM05D006765 ORTHO05D008554 5.9e-69 265.4 319 50.2
COL.COLO4_07747 Corchorus olitorius HOM05D006765 ORTHO05D008554 1.0e-68 264.6 341 48.1
CSS0046328 Camellia sinensis var. sinensis HOM05D006765 ORTHO05D008554 2.9e-68 263.1 357 49.6
GSVIVG01014751001 Vitis vinifera HOM05D006765 ORTHO05D008554 5.0e-68 262.3 337 47.2
Gohir.A04G004500 Gossypium hirsutum HOM05D006765 ORTHO05D008554 8.5e-68 261.5 338 47.3
TWI38G1422 Tripterygium wilfordii HOM05D006765 ORTHO05D008554 3.2e-67 259.6 325 48.3
Gorai.009G452100 Gossypium raimondii HOM05D006765 ORTHO05D008554 1.2e-66 257.7 336 47.0
Dinv40889 Davidia involucrata HOM05D006765 ORTHO05D008554 2.7e-66 256.5 375 43.5
TAR629G2312 Trochodendron aralioides HOM05D006765 ORTHO05D008554 1.0e-65 254.6 339 48.7
Duzib213G0912 Durio zibethinus HOM05D006765 ORTHO05D008554 3.0e-65 253.1 338 48.2
Gohir.D05G385400 Gossypium hirsutum HOM05D006765 ORTHO05D008554 1.1e-64 251.1 336 46.4
Actinidia03654 Actinidia chinensis HOM05D006765 ORTHO05D008554 3.3e-64 249.6 327 48.6
FAN21G2411 Fragaria x ananassa HOM05D006765 ORTHO05D008554 1.3e-63 247.7 324 47.8
CANSAT11G0072 Cannabis sativa HOM05D006765 ORTHO05D008554 2.8e-63 246.5 325 46.8
Ciclev10008671m.g Citrus clementina HOM05D006765 ORTHO05D008554 4.8e-63 245.7 378 39.9
Sabra16G0317200 Salix brachista HOM05D006765 ORTHO05D008554 4.8e-63 245.7 374 40.9
Lj1A895T73 Lonicera japonica HOM05D006765 ORTHO05D008554 6.3e-63 245.4 327 46.2
Eucgr.F02021 Eucalyptus grandis HOM05D006765 ORTHO05D008554 1.1e-62 244.6 334 44.0
Cpa.g.sc12.101 Carica papaya HOM05D006765 ORTHO05D008554 1.4e-62 244.2 327 44.6
MBI15_g19869_MAGBIO Magnolia biondii HOM05D006765 ORTHO05D008554 1.8e-62 243.8 325 45.5
Potri.001G467400 Populus trichocarpa HOM05D006765 ORTHO05D008554 7.0e-62 241.9 374 40.6
Peaxi162Scf00232g00025 Petunia axillaris HOM05D006765 ORTHO05D008554 1.5e-61 240.7 328 45.4
CAN.G623.40 Capsicum annuum HOM05D006765 ORTHO05D008554 2.0e-61 240.4 326 45.7
Nn1g07719 Nelumbo nucifera HOM05D006765 ORTHO05D008554 3.4e-61 239.6 340 43.5
FAN16G0764 Fragaria x ananassa HOM05D006765 ORTHO05D008554 1.3e-60 237.7 222 59.0
SGA_v2.0_scaffold168G38579 Striga asiatica HOM05D006765 ORTHO05D008554 1.3e-60 237.7 334 43.7
CiPaw.11G207500 Carya illinoinensis HOM05D006765 ORTHO05D008554 1.7e-60 237.3 299 48.8
PGR083G0751 Punica granatum HOM05D006765 ORTHO05D008554 1.9e-59 233.8 357 42.6
Nitab4.5_0003130g0010 Nicotiana tabacum HOM05D006765 ORTHO05D008554 2.5e-59 233.4 342 42.1
PGSC0003DMG400022157 Solanum tuberosum HOM05D006765 ORTHO05D008554 2.5e-59 233.4 329 44.1
Sopen07g034060 Solanum pennellii HOM05D006765 ORTHO05D008554 7.2e-59 231.9 337 42.1
Solyc07g065870.3 Solanum lycopersicum HOM05D006765 ORTHO05D008554 9.4e-59 231.5 335 42.1
Glyma.02G302700 Glycine max HOM05D006765 ORTHO05D008554 3.6e-58 229.6 335 45.4
Oeu005464.1 Olea europaea HOM05D006765 ORTHO05D008554 1.0e-57 228.0 327 42.2
Haze_09874 Corylus avellana HOM05D006765 ORTHO05D008554 3.0e-57 226.5 401 39.2
THA.LOC104801913 Tarenaya hassleriana HOM05D006765 ORTHO05D008554 2.0e-56 223.8 351 41.3
Migut.M01623 Erythranthe guttata HOM05D006765 ORTHO05D008554 2.6e-56 223.4 321 42.7
Cc05_g15360 Coffea canephora HOM05D006765 ORTHO05D008554 9.7e-56 221.5 234 54.7
Rhsim04G0010100 Rhododendron simsii HOM05D006765 ORTHO05D008554 2.2e-55 220.3 234 53.4
EL10Ac4g07518 Beta vulgaris HOM05D006765 ORTHO05D008554 3.7e-55 219.5 382 40.1
LjContig00081g0022778 Lotus japonicus HOM05D006765 ORTHO05D008554 3.7e-55 219.5 341 43.4
SalBow8G5524 Salvia bowleyana HOM05D006765 ORTHO05D008554 1.8e-54 217.2 333 42.0
AUR62017157 Chenopodium quinoa HOM05D006765 ORTHO05D008554 4.1e-54 216.1 380 39.2
Glyma.14G011300 Glycine max HOM05D006765 ORTHO05D008554 7.0e-54 215.3 335 44.5
Hma1.2p1_1094F.1_g256340 Hydrangea macrophylla HOM05D006765 ORTHO05D008554 5.9e-53 212.2 172 61.6
Nitab4.5_0000152g0290 Nicotiana tabacum HOM05D006765 ORTHO05D008554 1.0e-52 211.5 318 42.5
Phvul.008G281600 Phaseolus vulgaris HOM05D006765 ORTHO05D008554 1.0e-52 211.5 338 42.3
CARHR087860 Cardamine hirsuta HOM05D006765 ORTHO05D008554 1.7e-52 210.7 340 40.6
Lsat_1_v5_gn_7_114860 Lactuca sativa HOM05D006765 ORTHO05D008554 1.7e-52 210.7 345 41.2
Sc03g0011660 Simmondsia chinensis HOM05D006765 ORTHO05D008554 5.0e-52 209.1 215 52.1
TPR.G1253 Trifolium pratense HOM05D006765 ORTHO05D008554 5.0e-52 209.1 330 43.0
Aa31LG8G470 Aethionema arabicum HOM05D006765 ORTHO05D008554 2.5e-51 206.8 343 38.5
BcaB04g21007 Brassica carinata HOM05D006765 ORTHO05D008554 4.2e-51 206.1 380 36.3
Ca_06420_v3 Cicer arietinum L. HOM05D006765 ORTHO05D008554 1.2e-50 204.5 207 54.6
HanXRQChr15g0488021 Helianthus annuus HOM05D006765 ORTHO05D008554 3.6e-50 203.0 356 39.9
Hund01854 Selenicereus undatus HOM05D006765 ORTHO05D008554 3.6e-50 203.0 169 58.6
AUR62035647 Chenopodium quinoa HOM05D006765 ORTHO05D008554 4.7e-50 202.6 279 44.8
Carub.0003s1262 Capsella rubella HOM05D006765 ORTHO05D008554 8.0e-50 201.8 335 40.3
ECA236G1773 Erigeron canadensis HOM05D006765 ORTHO05D008554 1.0e-49 201.4 296 43.9
Medtr5g096560 Medicago truncatula HOM05D006765 ORTHO05D008554 6.7e-49 198.7 197 52.3
Psat2g006160 Pisum sativum HOM05D006765 ORTHO05D008554 8.8e-49 198.4 329 41.0
Lalb_Chr04g0247731 Lupinus albus HOM05D006765 ORTHO05D008554 2.0e-48 197.2 162 62.3
BraA01t04065Z Brassica rapa HOM05D006765 ORTHO05D008554 5.7e-48 195.7 375 35.2
Ah.08g214160 Amaranthus hybridus HOM05D006765 ORTHO05D008554 7.5e-48 195.3 368 37.5
BcaC09g48297 Brassica carinata HOM05D006765 ORTHO05D008554 7.5e-48 195.3 369 36.3
A01p40290 Brassica napus HOM05D006765 ORTHO05D008554 7.5e-48 195.3 375 35.5
Aqoxy2G01345 Aquilegia oxysepala HOM05D006765 ORTHO05D008554 9.7e-48 194.9 290 42.8
AL3G25050 Arabidopsis lyrata HOM05D006765 ORTHO05D008554 2.8e-47 193.4 383 36.3
PSO541G0333 Papaver somniferum HOM05D006765 ORTHO05D008554 2.8e-47 193.4 382 36.4
PSO675G8178 Papaver somniferum HOM05D006765 ORTHO05D008554 2.4e-46 190.3 203 52.7
arahy.Tifrunner.gnm1.ann1.C7HE0M Arachis hypogaea HOM05D006765 ORTHO05D008554 7.0e-46 188.7 202 52.0
Prupe.6G082900 Prunus persica HOM05D006765 ORTHO05D008554 2.7e-45 186.8 169 59.2
C01p51810 Brassica napus HOM05D006765 ORTHO05D008554 3.5e-45 186.4 282 38.7
BolC1t05128H Brassica oleracea HOM05D006765 ORTHO05D008554 3.5e-45 186.4 205 46.8
Zm00001eb433160 Zea mays HOM05D006765 ORTHO05D008554 4.5e-45 186.0 166 53.6
Sp3g11440 Schrenkiella parvula HOM05D006765 ORTHO05D008554 7.7e-45 185.3 171 54.4
VMungo0647G1474 Vigna mungo HOM05D006765 ORTHO05D008554 7.7e-45 185.3 386 36.8
AT3G13226 Arabidopsis thaliana HOM05D006765 ORTHO05D008554 1.0e-44 184.9 172 52.3
ATR0751G181 Amborella trichopoda HOM05D006765 ORTHO05D008554 2.2e-44 183.7 231 45.9
Os04g0667900 Oryza sativa ssp. japonica HOM05D006765 ORTHO05D008554 5.0e-44 182.6 239 45.6
Thhalv10020892m.g Eutrema salsugineum HOM05D006765 ORTHO05D008554 2.5e-43 180.3 169 53.8
DCAR_013261 Daucus carota HOM05D006765 ORTHO05D008554 4.2e-43 179.5 343 36.7
arahy.Tifrunner.gnm1.ann1.8KGR77 Arachis hypogaea HOM05D006765 ORTHO05D008554 2.0e-40 170.6 372 35.2
MD03G1037000 Malus domestica HOM05D006765 ORTHO05D008554 1.2e-37 161.4 119 67.2
vmacro09619 Vaccinium macrocarpon HOM05D006765 ORTHO05D008554 3.5e-37 159.8 255 42.4
Prupe.6G029900 Prunus persica HOM05D006765 ORTHO05D008554 3.3e-35 153.3 163 54.0
Thecc.07G007200 Theobroma cacao HOM05D006765 ORTHO05D008554 1.0e-33 148.3 233 43.8
CDE04G0216 Ceratophyllum demersum HOM05D006765 ORTHO05D008554 1.3e-31 141.4 143 50.3
Pp3c19_18350 Physcomitrium patens HOM05D006765 ORTHO05D008554 7.0e-30 135.6 222 38.7
SEGI_27535 Sequoiadendron giganteum HOM05D006765 ORTHO05D008554 6.8e-25 119.0 124 44.4
Mapoly0047s0103 Marchantia polymorpha HOM05D006765 ORTHO05D008554 3.2e-22 110.2 166 34.3
SMO115G0196 Selaginella moellendorffii HOM05D006765 ORTHO05D008554 3.0e-20 103.6 206 31.6
Psat2g006040 Pisum sativum HOM05D006765 ORTHO05D008554 1.2e-18 98.2 96 51.0
Hma1.2p1_1094F.1_g256330 Hydrangea macrophylla HOM05D006765 ORTHO05D008554 4.6e-13 79.7 217 32.7
Zm00001eb350950 Zea mays HOM05D004726 ORTHO05D005986 7.8e-13 79.0 59 54.2
MCO16G170 Micromonas commoda HOM05D006765 ORTHO05D008554 3.6e-10 70.1 182 28.0
MSTRG.15811 Avicennia marina HOM05D006765 ORTHO05D008554 2.3e-09 67.4 175 33.7


User provided reference genes

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