Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_7G014970 Cucumis sativus L. HOM05D004862 ORTHO05D005841 7.1e-68 260.4 123 100.0
CsaV3_7G014960 Cucumis sativus L. HOM05D004862 ORTHO05D005841 1.7e-66 255.8 123 99.2
CsaV3_7G014980 Cucumis sativus L. HOM05D004862 ORTHO05D005841 1.7e-66 255.8 123 99.2
CsaV3_7G015000 Cucumis sativus L. HOM05D004862 ORTHO05D005841 1.7e-66 255.8 123 99.2
CsaV3_UNG187480 Cucumis sativus L. HOM05D004862 ORTHO05D005841 1.7e-66 255.8 123 99.2
CsaV3_UNG189490 Cucumis sativus L. HOM05D004862 ORTHO05D005841 1.7e-66 255.8 123 99.2
CsaV3_7G015010 Cucumis sativus L. HOM05D004862 ORTHO05D005841 1.0e-50 203.4 102 93.1
MELO3C012691.2 Cucumis melo HOM05D004862 ORTHO05D005841 2.1e-48 195.7 94 97.9
CsaV3_7G022230 Cucumis sativus L. HOM05D004862 ORTHO05D005841 2.1e-48 195.7 94 97.9
ClCG09G014610 Citrullus lanatus HOM05D004862 ORTHO05D005841 5.3e-47 191.0 94 94.7
Sed0027136 Sechium edule HOM05D004862 ORTHO05D005841 6.9e-47 190.7 94 93.6
Cfa010154 Carpinus fangiana HOM05D004862 ORTHO05D005841 9.9e-46 186.8 94 93.6
Haze_23539 Corylus avellana HOM05D004862 ORTHO05D005841 1.3e-45 186.4 94 92.6
Lalb_Chr07g0189371 Lupinus albus HOM05D004862 ORTHO05D005841 1.7e-45 186.0 94 91.5
Lj4g0019477 Lotus japonicus HOM05D004862 ORTHO05D005841 2.2e-45 185.7 94 94.7
Dinv24234 Davidia involucrata HOM05D004862 ORTHO05D005841 2.9e-45 185.3 94 92.6
CiPaw.13G145700 Carya illinoinensis HOM05D004862 ORTHO05D005841 4.9e-45 184.5 94 90.4
Aqoxy6G00342 Aquilegia oxysepala HOM05D004862 ORTHO05D005841 6.4e-45 184.1 94 91.5
Prupe.6G329700 Prunus persica HOM05D004862 ORTHO05D005841 8.4e-45 183.7 94 92.6
TAR628G0283 Trochodendron aralioides HOM05D004862 ORTHO05D005841 8.4e-45 183.7 94 91.5
CSS0014529 Camellia sinensis var. sinensis HOM05D004862 ORTHO05D005841 1.1e-44 183.3 94 90.4
CSS0027197 Camellia sinensis var. sinensis HOM05D004862 ORTHO05D005841 1.1e-44 183.3 94 90.4
QL01p020593 Quercus lobata HOM05D004862 ORTHO05D005841 1.1e-44 183.3 93 92.5
Gohir.D13G060400 Gossypium hirsutum HOM05D004862 ORTHO05D005841 1.4e-44 183.0 94 92.6
Gorai.013G068500 Gossypium raimondii HOM05D004862 ORTHO05D005841 1.4e-44 183.0 94 92.6
Duzib132G0210 Durio zibethinus HOM05D004862 ORTHO05D005841 1.9e-44 182.6 94 92.6
TAR116G0002 Trochodendron aralioides HOM05D004862 ORTHO05D005841 2.4e-44 182.2 94 90.4
Atru.chr6.1121 Acer truncatum HOM05D004862 ORTHO05D005841 4.2e-44 181.4 94 91.5
Gohir.A01G012300 Gossypium hirsutum HOM05D004862 ORTHO05D005841 4.2e-44 181.4 94 91.5
Gohir.D01G013500 Gossypium hirsutum HOM05D004862 ORTHO05D005841 4.2e-44 181.4 94 91.5
Gorai.002G015300 Gossypium raimondii HOM05D004862 ORTHO05D005841 4.2e-44 181.4 94 91.5
Rhsim11G0133700 Rhododendron simsii HOM05D004862 ORTHO05D005841 4.2e-44 181.4 94 90.4
vmacro01803 Vaccinium macrocarpon HOM05D004862 ORTHO05D005841 4.2e-44 181.4 105 83.8
FAN02G3155 Fragaria x ananassa HOM05D004862 ORTHO05D005841 5.4e-44 181.0 94 90.4
FAN09G3019 Fragaria x ananassa HOM05D004862 ORTHO05D005841 5.4e-44 181.0 94 90.4
FAN14G4788 Fragaria x ananassa HOM05D004862 ORTHO05D005841 5.4e-44 181.0 94 90.4
FAN14G5837 Fragaria x ananassa HOM05D004862 ORTHO05D005841 5.4e-44 181.0 94 90.4
RcHm_v2.0_Chr3g0454151 Rosa chinensis HOM05D004862 ORTHO05D005841 5.4e-44 181.0 94 90.4
VMungo0251G1232 Vigna mungo HOM05D004862 ORTHO05D005841 5.4e-44 181.0 94 90.4
Ca_29818_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 7.1e-44 180.6 94 90.4
Eucgr.G00660 Eucalyptus grandis HOM05D004862 ORTHO05D005841 7.1e-44 180.6 94 89.4
MD12G1223100 Malus domestica HOM05D004862 ORTHO05D005841 7.1e-44 180.6 94 90.4
PSO675G5038 Papaver somniferum HOM05D004862 ORTHO05D005841 7.1e-44 180.6 94 89.4
Phvul.002G205600 Phaseolus vulgaris HOM05D004862 ORTHO05D005841 7.1e-44 180.6 94 90.4
GSVIVG01029751001 Vitis vinifera HOM05D004862 ORTHO05D005841 7.1e-44 180.6 94 91.5
DCAR_021834 Daucus carota HOM05D004862 ORTHO05D005841 9.3e-44 180.3 94 90.4
FvH4_6g05370 Fragaria vesca HOM05D004862 ORTHO05D005841 9.3e-44 180.3 94 90.4
CANSAT54G0577 Cannabis sativa HOM05D004862 ORTHO05D005841 1.2e-43 179.9 94 90.4
PGR042G3925 Punica granatum HOM05D004862 ORTHO05D005841 1.2e-43 179.9 94 89.4
TWI23G0249 Tripterygium wilfordii HOM05D004862 ORTHO05D005841 1.2e-43 179.9 94 89.4
FAN05G4126 Fragaria x ananassa HOM05D004862 ORTHO05D005841 1.6e-43 179.5 94 89.4
Thecc.02G156500 Theobroma cacao HOM05D004862 ORTHO05D005841 1.6e-43 179.5 94 91.5
Manes.14G165200 Manihot esculenta HOM05D004862 ORTHO05D005841 2.1e-43 179.1 94 88.3
Psat7g096360 Pisum sativum HOM05D004862 ORTHO05D005841 2.1e-43 179.1 94 88.3
arahy.Tifrunner.gnm1.ann1.34Q84K Arachis hypogaea HOM05D004862 ORTHO05D005841 2.7e-43 178.7 94 87.2
arahy.Tifrunner.gnm1.ann1.WE1E8S Arachis hypogaea HOM05D004862 ORTHO05D005841 2.7e-43 178.7 94 87.2
Gohir.A13G061500 Gossypium hirsutum HOM05D004862 ORTHO05D005841 3.5e-43 178.3 94 91.5
Peaxi162Scf00003g03739 Petunia axillaris HOM05D004862 ORTHO05D005841 3.5e-43 178.3 94 90.4
Thhalv10004120m.g Eutrema salsugineum HOM05D004862 ORTHO05D005841 4.6e-43 177.9 94 89.4
Cpa.g.sc845.1 Carica papaya HOM05D004862 ORTHO05D005841 6.0e-43 177.6 94 89.4
Glyma.08G075600 Glycine max HOM05D004862 ORTHO05D005841 6.0e-43 177.6 94 89.4
Potri.001G207000 Populus trichocarpa HOM05D004862 ORTHO05D005841 6.0e-43 177.6 94 88.3
Sp2g15560 Schrenkiella parvula HOM05D004862 ORTHO05D005841 6.0e-43 177.6 94 89.4
Aa31LG2G6120 Aethionema arabicum HOM05D004862 ORTHO05D005841 7.9e-43 177.2 94 90.4
AL5G15180 Arabidopsis lyrata HOM05D004862 ORTHO05D005841 7.9e-43 177.2 94 88.3
BcaB07g30229 Brassica carinata HOM05D004862 ORTHO05D005841 7.9e-43 177.2 94 88.3
Nitab4.5_0000078g0200 Nicotiana tabacum HOM05D004862 ORTHO05D005841 7.9e-43 177.2 94 89.4
Nitab4.5_0005079g0020 Nicotiana tabacum HOM05D004862 ORTHO05D005841 7.9e-43 177.2 94 88.3
PGSC0003DMG400017691 Solanum tuberosum HOM05D004862 ORTHO05D005841 7.9e-43 177.2 94 89.4
AT3G26410 Arabidopsis thaliana HOM05D004862 ORTHO05D005841 1.0e-42 176.8 94 88.3
FAN05G4337 Fragaria x ananassa HOM05D004862 ORTHO05D005841 1.0e-42 176.8 94 88.3
ATR1136G066 Amborella trichopoda HOM05D004862 ORTHO05D005841 1.3e-42 176.4 94 87.2
BcaC03g17366 Brassica carinata HOM05D004862 ORTHO05D005841 1.8e-42 176.0 94 88.3
C02p53070 Brassica napus HOM05D004862 ORTHO05D005841 1.8e-42 176.0 94 88.3
BolC2t11381H Brassica oleracea HOM05D004862 ORTHO05D005841 1.8e-42 176.0 94 88.3
Carub.0005s0438 Capsella rubella HOM05D004862 ORTHO05D005841 1.8e-42 176.0 94 88.3
Cc02_g18820 Coffea canephora HOM05D004862 ORTHO05D005841 1.8e-42 176.0 95 88.4
Glyma.05G121000 Glycine max HOM05D004862 ORTHO05D005841 1.8e-42 176.0 94 88.3
Lsat_1_v5_gn_9_117961 Lactuca sativa HOM05D004862 ORTHO05D005841 1.8e-42 176.0 94 87.2
Medtr4g094315 Medicago truncatula HOM05D004862 ORTHO05D005841 1.8e-42 176.0 94 89.4
TPR.G31479 Trifolium pratense HOM05D004862 ORTHO05D005841 1.8e-42 176.0 94 89.4
BcaNung06886 Brassica carinata HOM05D004862 ORTHO05D005841 2.3e-42 175.6 94 87.2
C07p35450 Brassica napus HOM05D004862 ORTHO05D005841 2.3e-42 175.6 94 87.2
BolC7t44069H Brassica oleracea HOM05D004862 ORTHO05D005841 2.3e-42 175.6 94 87.2
CAN.G1.65 Capsicum annuum HOM05D004862 ORTHO05D005841 2.3e-42 175.6 94 88.3
HanXRQChr03g0065771 Helianthus annuus HOM05D004862 ORTHO05D005841 3.0e-42 175.3 94 87.2
Oeu000228.1 Olea europaea HOM05D004862 ORTHO05D005841 3.0e-42 175.3 94 86.2
Sabra01G0160300 Salix brachista HOM05D004862 ORTHO05D005841 3.0e-42 175.3 93 88.2
THA.LOC104818254 Tarenaya hassleriana HOM05D004862 ORTHO05D005841 3.0e-42 175.3 94 86.2
A06p42030 Brassica napus HOM05D004862 ORTHO05D005841 3.9e-42 174.9 94 87.2
BraA06t27120Z Brassica rapa HOM05D004862 ORTHO05D005841 3.9e-42 174.9 94 87.2
CARHR147430 Cardamine hirsuta HOM05D004862 ORTHO05D005841 3.9e-42 174.9 94 89.4
ECA240G2004 Erigeron canadensis HOM05D004862 ORTHO05D005841 3.9e-42 174.9 94 87.2
Os02g0556400 Oryza sativa ssp. japonica HOM05D004862 ORTHO05D005841 5.1e-42 174.5 94 85.1
Zm00001eb243830 Zea mays HOM05D004862 ORTHO05D005841 5.1e-42 174.5 94 86.2
COL.COLO4_33088 Corchorus olitorius HOM05D004862 ORTHO05D005841 6.7e-42 174.1 94 88.3
Lj5A244T54 Lonicera japonica HOM05D004862 ORTHO05D005841 6.7e-42 174.1 94 87.2
BraA02t08465Z Brassica rapa HOM05D004862 ORTHO05D005841 8.7e-42 173.7 94 87.2
SGA_v2.0_scaffold332G48937 Striga asiatica HOM05D004862 ORTHO05D005841 8.7e-42 173.7 94 86.2
Ciclev10015108m.g Citrus clementina HOM05D004862 ORTHO05D005841 1.1e-41 173.3 94 88.3
Solyc10g047120.2 Solanum lycopersicum HOM05D004862 ORTHO05D005841 1.1e-41 173.3 94 86.2
PSO541G6054 Papaver somniferum HOM05D004862 ORTHO05D005841 1.5e-41 172.9 99 83.8
Nn1g06191 Nelumbo nucifera HOM05D004862 ORTHO05D005841 1.9e-41 172.6 94 86.2
Hund06875 Selenicereus undatus HOM05D004862 ORTHO05D005841 1.9e-41 172.6 94 87.2
Sopen10g017280 Solanum pennellii HOM05D004862 ORTHO05D005841 1.9e-41 172.6 94 86.2
Lj9A317G73 Lonicera japonica HOM05D004862 ORTHO05D005841 2.5e-41 172.2 94 86.2
C02p53050 Brassica napus HOM05D004862 ORTHO05D005841 3.3e-41 171.8 94 86.2
MBI06_g20970_MAGBIO Magnolia biondii HOM05D004862 ORTHO05D005841 3.3e-41 171.8 113 76.1
MSTRG.16558 Avicennia marina HOM05D004862 ORTHO05D005841 4.3e-41 171.4 94 81.9
A02p34570 Brassica napus HOM05D004862 ORTHO05D005841 4.3e-41 171.4 94 86.2
SalBow5G3806 Salvia bowleyana HOM05D004862 ORTHO05D005841 4.3e-41 171.4 94 84.0
SalBow5G4932 Salvia bowleyana HOM05D004862 ORTHO05D005841 4.3e-41 171.4 94 84.0
CDE02G2941 Ceratophyllum demersum HOM05D004862 ORTHO05D005841 5.6e-41 171.0 94 86.2
Sc09g0004450 Simmondsia chinensis HOM05D004862 ORTHO05D005841 5.6e-41 171.0 94 87.2
Ah.04g163010 Amaranthus hybridus HOM05D004862 ORTHO05D005841 7.4e-41 170.6 94 86.2
EL10Ac4g08938 Beta vulgaris HOM05D004862 ORTHO05D005841 7.4e-41 170.6 94 87.2
AUR62004780 Chenopodium quinoa HOM05D004862 ORTHO05D005841 7.4e-41 170.6 94 86.2
SHI16537 Sapria himalayana HOM05D004862 ORTHO05D005841 7.4e-41 170.6 94 84.0
Migut.B00646 Erythranthe guttata HOM05D004862 ORTHO05D005841 9.6e-41 170.2 94 84.0
HPP92_004630 Vanilla planifolia HOM05D004862 ORTHO05D005841 9.6e-41 170.2 94 81.9
HPP92_004639 Vanilla planifolia HOM05D004862 ORTHO05D005841 9.6e-41 170.2 94 81.9
BolC2t11366H Brassica oleracea HOM05D004862 ORTHO05D005841 1.6e-40 169.5 100 83.0
AUR62003397 Chenopodium quinoa HOM05D004862 ORTHO05D005841 1.6e-40 169.5 94 86.2
SEGI_00112 Sequoiadendron giganteum HOM05D004862 ORTHO05D005841 3.1e-39 165.2 94 81.9
SEGI_34202 Sequoiadendron giganteum HOM05D004862 ORTHO05D005841 3.1e-39 165.2 94 81.9
SMO115G0021 Selaginella moellendorffii HOM05D004862 ORTHO05D005841 2.6e-38 162.2 94 76.6
Mapoly0006s0193 Marchantia polymorpha HOM05D004862 ORTHO05D005841 5.8e-38 161.0 94 80.9
CBR_g37214 Chara braunii HOM05D004862 ORTHO05D005841 2.1e-35 152.5 94 73.4
Pp3c13_18080 Physcomitrium patens HOM05D004862 ORTHO05D005841 4.6e-35 151.4 94 74.5
BcaC03g17340 Brassica carinata HOM05D004862 ORTHO05D005841 2.2e-29 132.5 71 90.1
C02p52870 Brassica napus HOM05D004862 ORTHO05D005841 2.2e-29 132.5 71 90.1
Ciclev10008412m.g Citrus clementina HOM05D004862 ORTHO05D005841 1.1e-28 130.2 86 75.6
Cre08.g359100 Chlamydomonas reinhardtii HOM05D004862 ORTHO05D005841 1.0e-21 107.1 103 53.4
unitig_26.g9585 Utricularia gibba HOM05D004862 ORTHO05D005841 1.0e-21 107.1 52 86.5
MCO05G740 Micromonas commoda HOM05D004862 ORTHO05D005841 3.2e-20 102.1 92 52.2
PRCOL_00003583 Prasinoderma coloniale HOM05D004862 ORTHO05D005841 1.2e-19 100.1 94 56.4
BolC2t11379H Brassica oleracea HOM05D004862 ORTHO05D005841 2.2e-16 89.4 70 67.1
CsaV3_UNG197500 Cucumis sativus L. HOM05D004862 ORTHO05D005841 1.8e-15 86.3 43 100.0
Ca_31280_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 2.2e-13 79.3 43 90.7
Cfa021801 Carpinus fangiana HOM05D004862 ORTHO05D005841 9.4e-12 73.9 69 52.2
Potri.003G022650 Populus trichocarpa HOM05D004862 ORTHO05D005841 2.0e-09 66.2 42 73.8


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