Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_7G010190 Cucumis sativus L. HOM05D001401 ORTHO05D006368 1.0e-152 543.5 302 100.0
MELO3C018410.2 Cucumis melo HOM05D001401 ORTHO05D006368 3.8e-139 498.4 306 92.5
ClCG02G005370 Citrullus lanatus HOM05D001401 ORTHO05D006368 3.1e-125 452.2 306 85.0
Sed0001319 Sechium edule HOM05D001401 ORTHO05D006368 4.0e-104 382.1 302 67.9
RcHm_v2.0_Chr6g0262181 Rosa chinensis HOM05D001401 ORTHO05D006368 7.3e-66 255.0 310 48.4
Haze_02430 Corylus avellana HOM05D001401 ORTHO05D006368 1.4e-64 250.8 311 52.7
FAN20G2914 Fragaria x ananassa HOM05D001401 ORTHO05D006368 1.8e-64 250.4 305 46.9
Sed0001686 Sechium edule HOM05D001401 ORTHO05D006368 3.1e-64 249.6 310 47.1
CiPaw.05G060100 Carya illinoinensis HOM05D001401 ORTHO05D006368 5.2e-64 248.8 312 47.8
MELO3C021952.2 Cucumis melo HOM05D001401 ORTHO05D002222 5.2e-64 248.8 307 46.3
Potri.004G149900 Populus trichocarpa HOM05D001401 ORTHO05D006368 6.8e-64 248.4 322 47.2
Manes.17G098401 Manihot esculenta HOM05D001401 ORTHO05D006368 7.5e-63 245.0 323 47.4
Prupe.8G107000 Prunus persica HOM05D001401 ORTHO05D006368 1.7e-62 243.8 309 50.5
Manes.15G147100 Manihot esculenta HOM05D001401 ORTHO05D006368 4.9e-62 242.3 324 44.8
TAR628G1386 Trochodendron aralioides HOM05D001401 ORTHO05D006368 1.4e-61 240.7 309 46.0
CANSAT25G1485 Cannabis sativa HOM05D001401 ORTHO05D006368 3.2e-61 239.6 308 49.4
Sed0023769 Sechium edule HOM05D001401 ORTHO05D006368 4.1e-61 239.2 309 47.6
ClCG09G017860 Citrullus lanatus HOM05D001401 ORTHO05D006368 1.6e-60 237.3 311 50.2
Potri.009G111000 Populus trichocarpa HOM05D001401 ORTHO05D006368 2.1e-60 236.9 322 46.3
CsaV3_2G014470 Cucumis sativus L. HOM05D001401 ORTHO05D006368 2.7e-60 236.5 310 46.5
Aqoxy6G00969 Aquilegia oxysepala HOM05D001401 ORTHO05D006368 5.1e-59 232.3 309 43.7
Cfa021516 Carpinus fangiana HOM05D001401 ORTHO05D006368 8.6e-59 231.5 216 56.9
Ciclev10028944m.g Citrus clementina HOM05D001401 ORTHO05D006368 8.6e-59 231.5 314 45.9
Phvul.011G048500 Phaseolus vulgaris HOM05D001401 ORTHO05D006368 1.1e-58 231.1 315 43.2
Thecc.02G031200 Theobroma cacao HOM05D001401 ORTHO05D006368 1.1e-58 231.1 329 44.1
vmacro02151 Vaccinium macrocarpon HOM05D001401 ORTHO05D006368 1.1e-58 231.1 308 45.8
QL11p040047 Quercus lobata HOM05D001401 ORTHO05D006368 5.6e-58 228.8 214 55.6
MD05G1071000 Malus domestica HOM05D001401 ORTHO05D006368 7.3e-58 228.4 316 43.4
VMungo1127G1180 Vigna mungo HOM05D001401 ORTHO05D006368 9.5e-58 228.0 316 43.4
AT2G16070 Arabidopsis thaliana HOM05D001401 ORTHO05D006368 1.2e-57 227.6 312 43.3
FAN24G0528 Fragaria x ananassa HOM05D001401 ORTHO05D006368 1.6e-57 227.3 308 49.0
QL11p037824 Quercus lobata HOM05D001401 ORTHO05D006368 2.8e-57 226.5 335 41.2
Medtr4g068880 Medicago truncatula HOM05D001401 ORTHO05D006368 3.6e-57 226.1 312 48.7
Glyma.12G046700 Glycine max HOM05D001401 ORTHO05D006368 1.1e-56 224.6 315 42.5
FvH4_2g07780 Fragaria vesca HOM05D001401 ORTHO05D006368 3.1e-56 223.0 308 48.7
TAR381G0019 Trochodendron aralioides HOM05D001401 ORTHO05D006368 2.0e-55 220.3 309 42.4
Hma1.2p1_0584F.1_g183440 Hydrangea macrophylla HOM05D001401 ORTHO05D006368 2.6e-55 219.9 309 42.1
Cfa021524 Carpinus fangiana HOM05D001401 ORTHO05D002222 3.4e-55 219.5 209 56.0
Sabra09G0084600 Salix brachista HOM05D001401 ORTHO05D006368 4.4e-55 219.2 320 45.0
Lj3g0025450 Lotus japonicus HOM05D001401 ORTHO05D006368 5.8e-55 218.8 318 43.1
arahy.Tifrunner.gnm1.ann1.U2ETAV Arachis hypogaea HOM05D001401 ORTHO05D006368 7.6e-55 218.4 315 41.6
CSS0017552 Camellia sinensis var. sinensis HOM05D001401 ORTHO05D006368 7.6e-55 218.4 219 53.9
TWI31G0569 Tripterygium wilfordii HOM05D001401 ORTHO05D002222 7.6e-55 218.4 316 46.5
Ca_20836_v3 Cicer arietinum L. HOM05D001401 ORTHO05D006368 9.9e-55 218.0 312 42.3
Psat7g205720 Pisum sativum HOM05D001401 ORTHO05D006368 1.3e-54 217.6 314 44.3
FAN15G1840 Fragaria x ananassa HOM05D001401 ORTHO05D006368 2.2e-54 216.9 214 54.2
Glyma.11G121600 Glycine max HOM05D001401 ORTHO05D006368 2.2e-54 216.9 314 44.6
Lalb_Chr03g0025871 Lupinus albus HOM05D001401 ORTHO05D006368 2.2e-54 216.9 311 44.1
Gohir.A01G181100 Gossypium hirsutum HOM05D001401 ORTHO05D006368 6.4e-54 215.3 315 43.8
Sabra04G0099700 Salix brachista HOM05D001401 ORTHO05D006368 6.4e-54 215.3 362 40.3
THA.LOC104807334 Tarenaya hassleriana HOM05D001401 ORTHO05D006368 8.4e-54 214.9 324 42.6
Actinidia27915 Actinidia chinensis HOM05D001401 ORTHO05D006368 1.1e-53 214.5 317 41.6
Gorai.002G213800 Gossypium raimondii HOM05D001401 ORTHO05D006368 1.4e-53 214.2 313 42.8
TWI75G1696 Tripterygium wilfordii HOM05D001401 ORTHO05D006368 2.4e-53 213.4 310 47.1
Duzib132G0928 Durio zibethinus HOM05D001401 ORTHO05D006368 3.2e-53 213.0 325 41.2
Gohir.D01G172200 Gossypium hirsutum HOM05D001401 ORTHO05D006368 3.2e-53 213.0 313 42.5
Atru.chr5.2919 Acer truncatum HOM05D001401 ORTHO05D006368 5.4e-53 212.2 307 43.6
Dinv23564 Davidia involucrata HOM05D001401 ORTHO05D006368 7.1e-53 211.8 215 50.7
Aa31LG8G13520 Aethionema arabicum HOM05D001401 ORTHO05D006368 1.6e-52 210.7 310 41.9
Duzib248G1632 Durio zibethinus HOM05D001401 ORTHO05D006368 1.6e-52 210.7 343 40.5
PSO700G0268 Papaver somniferum HOM05D001401 ORTHO05D006368 2.1e-52 210.3 309 43.0
Sp3g29340 Schrenkiella parvula HOM05D001401 ORTHO05D006368 2.1e-52 210.3 321 40.8
CARHR106370 Cardamine hirsuta HOM05D001401 ORTHO05D006368 2.7e-52 209.9 316 41.5
Carub.0003s2988 Capsella rubella HOM05D001401 ORTHO05D006368 6.0e-52 208.8 319 41.1
Rhsim11G0172600 Rhododendron simsii HOM05D000554 ORTHO05D002829 1.3e-51 207.6 215 52.6
COL.COLO4_17797 Corchorus olitorius HOM05D000370 ORTHO05D001335 5.1e-51 205.7 248 46.4
PSO675G0936 Papaver somniferum HOM05D001401 ORTHO05D006368 8.6e-51 204.9 312 40.4
PSO170G2675 Papaver somniferum HOM05D001401 ORTHO05D006368 1.1e-50 204.5 309 42.1
Nitab4.5_0003816g0020 Nicotiana tabacum HOM05D001401 ORTHO05D006368 2.5e-50 203.4 311 41.8
PSO541G5534 Papaver somniferum HOM05D001401 ORTHO05D006368 5.6e-50 202.2 312 40.1
Thhalv10022794m.g Eutrema salsugineum HOM05D001401 ORTHO05D006368 9.6e-50 201.4 310 41.3
Hund00301 Selenicereus undatus HOM05D001401 ORTHO05D006368 9.6e-50 201.4 315 38.7
Hund06213 Selenicereus undatus HOM05D001401 ORTHO05D006368 9.6e-50 201.4 310 40.3
Lalb_Chr01g0002831 Lupinus albus HOM05D001401 ORTHO05D006368 2.1e-49 200.3 319 40.4
Medtr0026s0200 Medicago truncatula HOM05D001401 ORTHO05D006368 2.8e-49 199.9 221 50.2
Nn5g29458 Nelumbo nucifera HOM05D001401 ORTHO05D006368 6.2e-49 198.7 308 41.6
Oeu034083.1 Olea europaea HOM05D001401 ORTHO05D006368 1.1e-48 198.0 309 39.2
A07p04770 Brassica napus HOM05D001401 ORTHO05D006368 1.4e-48 197.6 311 41.5
BraA07t28264Z Brassica rapa HOM05D001401 ORTHO05D006368 1.4e-48 197.6 311 41.5
Cpa.g.sc62.97 Carica papaya HOM05D001401 ORTHO05D006368 2.4e-48 196.8 325 37.8
Dinv42099 Davidia involucrata HOM05D001401 ORTHO05D006368 2.4e-48 196.8 311 43.7
TPR.G28096 Trifolium pratense HOM05D001401 ORTHO05D006368 6.8e-48 195.3 218 48.2
TWI79G1069 Tripterygium wilfordii HOM05D001401 ORTHO05D002222 6.8e-48 195.3 307 44.3
AUR62016681 Chenopodium quinoa HOM05D001401 ORTHO05D006368 8.9e-48 194.9 308 38.3
C07p07640 Brassica napus HOM05D001401 ORTHO05D006368 1.5e-47 194.1 313 39.3
BolC7t41185H Brassica oleracea HOM05D001401 ORTHO05D006368 1.5e-47 194.1 313 39.3
DCAR_029001 Daucus carota HOM05D001401 ORTHO05D006368 5.8e-47 192.2 309 39.5
Nitab4.5_0004280g0010 Nicotiana tabacum HOM05D001401 ORTHO05D006368 5.8e-47 192.2 319 39.2
BcaC01g03041 Brassica carinata HOM05D001401 ORTHO05D006368 9.9e-47 191.4 325 39.7
C03p56790 Brassica napus HOM05D001401 ORTHO05D006368 9.9e-47 191.4 325 39.7
BolC3t17961H Brassica oleracea HOM05D001401 ORTHO05D006368 9.9e-47 191.4 325 39.7
AUR62011378 Chenopodium quinoa HOM05D001401 ORTHO05D006368 1.3e-46 191.0 308 37.3
SalBow6G2648 Salvia bowleyana HOM05D001401 ORTHO05D006368 1.7e-46 190.7 308 40.6
Hund00294 Selenicereus undatus HOM05D001401 ORTHO05D006368 2.2e-46 190.3 299 38.1
Eucgr.I01238 Eucalyptus grandis HOM05D001401 ORTHO05D006368 4.9e-46 189.1 307 44.3
Lj9P365T45 Lonicera japonica HOM05D001401 ORTHO05D006368 4.9e-46 189.1 216 49.5
Actinidia00491 Actinidia chinensis HOM05D001401 ORTHO05D006368 1.1e-45 188.0 315 39.7
BcaB08g34633 Brassica carinata HOM05D001401 ORTHO05D006368 1.1e-45 188.0 321 40.2
Migut.N01216 Erythranthe guttata HOM05D001401 ORTHO05D006368 9.3e-45 184.9 308 39.3
BraA03t13701Z Brassica rapa HOM05D001401 ORTHO05D006368 1.2e-44 184.5 316 38.3
A03p45690 Brassica napus HOM05D001401 ORTHO05D006368 1.6e-44 184.1 313 39.3
Sc08g0000270 Simmondsia chinensis HOM05D001401 ORTHO05D006368 2.1e-44 183.7 313 37.7
BcaC06g36113 Brassica carinata HOM05D001401 ORTHO05D006368 2.7e-44 183.3 313 38.3
MBI16_g36202_MAGBIO Magnolia biondii HOM05D001401 ORTHO05D002222 3.5e-44 183.0 240 46.7
Peaxi162Scf00016g01140 Petunia axillaris HOM05D001401 ORTHO05D006368 3.5e-44 183.0 312 38.1
Lsat_1_v5_gn_5_118161 Lactuca sativa HOM05D001401 ORTHO05D006368 3.0e-43 179.9 311 39.9
ATR0733G254 Amborella trichopoda HOM05D001401 ORTHO05D006368 5.1e-43 179.1 321 35.5
MSTRG.5386 Avicennia marina HOM05D001401 ORTHO05D006368 1.5e-42 177.6 323 38.1
A09p10890 Brassica napus HOM05D001401 ORTHO05D006368 2.8e-41 173.3 311 39.5
Migut.B00279 Erythranthe guttata HOM05D001401 ORTHO05D006368 2.8e-41 173.3 308 38.0
Os07g0123300 Oryza sativa ssp. japonica HOM05D001401 ORTHO05D006368 2.8e-41 173.3 246 39.4
Ah.01g006390 Amaranthus hybridus HOM05D001401 ORTHO05D006368 4.8e-41 172.6 303 36.3
PGSC0003DMG400025176 Solanum tuberosum HOM05D001401 ORTHO05D006368 4.8e-41 172.6 310 37.1
Sopen01g051420 Solanum pennellii HOM05D001401 ORTHO05D006368 8.1e-41 171.8 310 35.8
THA.LOC104820173 Tarenaya hassleriana HOM05D001401 ORTHO05D006368 1.1e-40 171.4 320 37.8
Cc02_g18020 Coffea canephora HOM05D001401 ORTHO05D006368 2.4e-40 170.2 312 37.5
HanXRQChr10g0307141 Helianthus annuus HOM05D001401 ORTHO05D006368 3.1e-40 169.9 305 37.4
Solyc01g109260.3 Solanum lycopersicum HOM05D001401 ORTHO05D006368 4.0e-40 169.5 310 36.5
MSTRG.20113 Avicennia marina HOM05D001401 ORTHO05D006368 5.3e-40 169.1 311 37.6
CAN.G322.101 Capsicum annuum HOM05D001401 ORTHO05D006368 1.5e-39 167.5 309 36.2
CDE01G0160 Ceratophyllum demersum HOM05D001401 ORTHO05D006368 1.5e-39 167.5 310 39.0
SGA_v2.0_scaffold58G20583 Striga asiatica HOM05D001401 ORTHO05D006368 7.6e-39 165.2 307 36.2
PGR042G1488 Punica granatum HOM05D001401 ORTHO05D006368 4.9e-38 162.5 303 39.9
ECA234G2696 Erigeron canadensis HOM05D000324 ORTHO05D001014 9.3e-37 158.3 305 35.1
Oeu027593.1 Olea europaea HOM05D001574 ORTHO05D006368 4.8e-33 146.0 282 35.5
Ah.01g019700 Amaranthus hybridus HOM05D001401 ORTHO05D002222 1.8e-32 144.1 201 38.3
SEGI_00142 Sequoiadendron giganteum HOM05D001401 ORTHO05D006368 9.9e-31 138.3 274 35.4
CDE04G2456 Ceratophyllum demersum HOM05D001401 ORTHO05D006368 1.2e-28 131.3 309 34.3
EL10Ac9g21774 Beta vulgaris HOM05D001401 ORTHO05D002222 1.6e-28 131.0 279 36.9
Zm00001eb299190 Zea mays HOM05D001401 ORTHO05D006368 1.8e-27 127.5 257 34.2
C09p12860 Brassica napus HOM05D001401 ORTHO05D006368 5.6e-26 122.5 303 35.3
BolC9t54175H Brassica oleracea HOM05D001401 ORTHO05D006368 5.6e-26 122.5 303 35.3
Pp3c1_32220 Physcomitrium patens HOM05D001401 ORTHO05D006368 7.6e-23 112.1 350 30.0
Nn1g05138 Nelumbo nucifera HOM05D001401 ORTHO05D006368 8.4e-22 108.6 153 45.1
BraA09t36729Z Brassica rapa HOM05D001401 ORTHO05D006368 9.3e-21 105.1 153 43.1
Mapoly0001s0328 Marchantia polymorpha HOM05D001401 ORTHO05D006368 1.2e-20 104.8 362 28.2
Pp3c2_5300 Physcomitrium patens HOM05D001401 ORTHO05D006368 1.0e-19 101.7 355 29.3
BcaNung01772 Brassica carinata HOM05D001401 ORTHO05D006368 5.7e-18 95.9 206 36.4
BcaB07g31630 Brassica carinata HOM05D006912 ORTHO05D008686 1.3e-17 94.7 151 41.7
GSVIVG01031902001 Vitis vinifera HOM05D001401 ORTHO05D006368 1.3e-17 94.7 153 41.2
TAR623G1717 Trochodendron aralioides HOM05D001401 ORTHO05D006368 1.8e-16 90.9 88 53.4
Pp3c17_18860 Physcomitrium patens HOM05D001401 ORTHO05D006368 3.1e-16 90.1 354 27.7
Lj1C312T0 Lonicera japonica HOM05D001401 ORTHO05D006368 1.5e-15 87.8 130 41.5
SEGI_14403 Sequoiadendron giganteum HOM05D001401 ORTHO05D006368 1.0e-14 85.1 347 26.2
AagrBONN_evm.TU.Sc2ySwM_228.2503 Anthoceros agrestis HOM05D001401 ORTHO05D006368 5.0e-14 82.8 320 28.8
Pp3c22_17090 Physcomitrium patens HOM05D001401 ORTHO05D006368 6.5e-14 82.4 384 24.2
CDE02G3784 Ceratophyllum demersum HOM05D001401 ORTHO05D002222 3.2e-13 80.1 120 38.3
Pp3c19_14090 Physcomitrium patens HOM05D001401 ORTHO05D006368 1.9e-10 70.9 380 21.8
BcaC04g23035 Brassica carinata HOM05D001401 ORTHO05D006368 2.2e-09 67.4 87 43.7
SalBow1G1061 Salvia bowleyana HOM05D001999 ORTHO05D001994 6.3e-09 65.9 55 63.6
FAN15G1877 Fragaria x ananassa HOM05D001401 ORTHO05D006368 2.4e-08 63.9 43 67.4


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