Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_7G010070 Cucumis sativus L. HOM05D004816 ORTHO05D006043 2.7e-265 918.3 526 100.0
MELO3C018421.2 Cucumis melo HOM05D004816 ORTHO05D006043 5.8e-252 874.0 527 94.7
ClCG02G005580 Citrullus lanatus HOM05D004816 ORTHO05D006043 4.0e-229 798.1 527 88.4
Sed0008645 Sechium edule HOM05D004816 ORTHO05D006043 2.3e-216 755.7 528 84.7
Cfa004941 Carpinus fangiana HOM05D004816 ORTHO05D006043 1.7e-163 580.1 471 68.8
GSVIVG01031842001 Vitis vinifera HOM05D004816 ORTHO05D006043 1.4e-160 570.5 475 68.4
QL11p039002 Quercus lobata HOM05D004816 ORTHO05D006043 2.3e-160 569.7 470 67.4
QL11p040287 Quercus lobata HOM05D004816 ORTHO05D006043 4.0e-160 568.9 470 67.4
CiPaw.06G139500 Carya illinoinensis HOM05D004816 ORTHO05D006043 2.3e-155 553.1 531 65.2
Dinv23600 Davidia involucrata HOM05D004816 ORTHO05D006043 2.3e-155 553.1 473 66.4
CSS0036891 Camellia sinensis var. sinensis HOM05D004816 ORTHO05D006043 1.5e-154 550.4 475 66.9
Potri.009G107800 Populus trichocarpa HOM05D004816 ORTHO05D006043 3.6e-153 545.8 472 65.5
Atru.chr5.2842 Acer truncatum HOM05D004816 ORTHO05D006043 1.0e-152 544.3 472 64.2
TAR625G0829 Trochodendron aralioides HOM05D004816 ORTHO05D006043 3.4e-151 539.3 475 64.8
Duzib248G0025 Durio zibethinus HOM05D004816 ORTHO05D006043 1.7e-150 537.0 477 64.4
MD10G1088000 Malus domestica HOM05D004816 ORTHO05D006043 4.6e-148 528.9 530 58.7
Glyma.20G009200 Glycine max HOM05D004816 ORTHO05D006043 2.3e-147 526.6 522 59.2
Manes.17G095600 Manihot esculenta HOM05D004816 ORTHO05D006043 3.9e-147 525.8 531 59.7
Ca_12466_v3 Cicer arietinum L. HOM05D004816 ORTHO05D006043 2.5e-146 523.1 475 64.2
PGSC0003DMG402025925 Solanum tuberosum HOM05D004816 ORTHO05D006043 2.8e-145 519.6 473 60.9
Actinidia17843 Actinidia chinensis HOM05D004816 ORTHO05D006043 1.8e-144 516.9 474 62.0
CANSAT25G1860 Cannabis sativa HOM05D004816 ORTHO05D006043 6.8e-144 515.0 532 58.3
COL.COLO4_11733 Corchorus olitorius HOM05D004816 ORTHO05D006043 6.8e-144 515.0 473 61.9
Sopen01g051090 Solanum pennellii HOM05D004816 ORTHO05D006043 5.8e-143 511.9 516 58.3
Thecc.02G094000 Theobroma cacao HOM05D004816 ORTHO05D006043 5.8e-143 511.9 473 61.3
Haze_02469 Corylus avellana HOM05D004816 ORTHO05D006043 9.8e-143 511.1 557 56.2
Nn6g32127 Nelumbo nucifera HOM05D004816 ORTHO05D006043 9.8e-143 511.1 475 61.5
Phvul.003G011700 Phaseolus vulgaris HOM05D004816 ORTHO05D006043 9.8e-143 511.1 515 58.6
Solyc01g108890.3 Solanum lycopersicum HOM05D004816 ORTHO05D006043 1.7e-142 510.4 516 57.9
Medtr1g034170 Medicago truncatula HOM05D004816 ORTHO05D006043 4.9e-142 508.8 476 62.2
Duzib132G0866 Durio zibethinus HOM05D004816 ORTHO05D006043 1.4e-141 507.3 473 61.1
TPR.G18619 Trifolium pratense HOM05D004816 ORTHO05D006043 1.4e-141 507.3 468 62.4
Lalb_Chr10g0095411 Lupinus albus HOM05D004816 ORTHO05D006043 2.4e-141 506.5 475 61.9
Aqoxy6G00919 Aquilegia oxysepala HOM05D004816 ORTHO05D006043 1.2e-140 504.2 471 62.6
MD05G1073700 Malus domestica HOM05D004816 ORTHO05D006043 4.6e-140 502.3 530 56.6
Lj5A205G67 Lonicera japonica HOM05D004816 ORTHO05D006043 7.8e-140 501.5 489 60.9
arahy.Tifrunner.gnm1.ann1.D5RGK8 Arachis hypogaea HOM05D004816 ORTHO05D006043 1.0e-139 501.1 500 59.4
arahy.Tifrunner.gnm1.ann1.WD2X18 Arachis hypogaea HOM05D004816 ORTHO05D006043 3.9e-139 499.2 500 59.2
FvH4_2g07090 Fragaria vesca HOM05D004816 ORTHO05D006043 6.6e-139 498.4 420 66.7
PSO675G8525 Papaver somniferum HOM05D004816 ORTHO05D006043 8.6e-139 498.0 474 60.5
SGA_v2.0_scaffold58G20600 Striga asiatica HOM05D004816 ORTHO05D006043 5.6e-138 495.4 522 56.9
Sabra09G0082300 Salix brachista HOM05D004816 ORTHO05D006043 7.3e-138 495.0 531 55.9
MBI16_g31473_MAGBIO Magnolia biondii HOM05D004816 ORTHO05D006043 9.5e-138 494.6 489 59.9
TWI31G1354 Tripterygium wilfordii HOM05D004816 ORTHO05D006043 2.1e-137 493.4 483 60.2
Actinidia27933 Actinidia chinensis HOM05D004816 ORTHO05D006043 3.6e-137 492.7 465 60.9
Gohir.A12G026800 Gossypium hirsutum HOM05D004816 ORTHO05D006043 8.1e-137 491.5 527 58.4
PSO541G0848 Papaver somniferum HOM05D004816 ORTHO05D006043 1.8e-136 490.3 474 60.5
Gohir.D12G026300 Gossypium hirsutum HOM05D004816 ORTHO05D006043 8.9e-136 488.0 535 56.4
Rhsim05G0079600 Rhododendron simsii HOM05D004816 ORTHO05D006043 8.9e-136 488.0 500 58.0
AT2G15860 Arabidopsis thaliana HOM05D004816 ORTHO05D006043 1.5e-135 487.3 532 55.3
Gorai.008G026600 Gossypium raimondii HOM05D004816 ORTHO05D006043 1.5e-135 487.3 535 56.4
Eucgr.I01207 Eucalyptus grandis HOM05D004816 ORTHO05D006043 2.0e-135 486.9 460 58.0
AL3G47650 Arabidopsis lyrata HOM05D004816 ORTHO05D006043 3.4e-135 486.1 532 54.5
Sp3g29160 Schrenkiella parvula HOM05D004816 ORTHO05D006043 4.4e-135 485.7 530 54.0
Glyma.07G180000 Glycine max HOM05D004816 ORTHO05D006043 9.8e-135 484.6 412 64.3
Ciclev10028431m.g Citrus clementina HOM05D004816 ORTHO05D006043 1.7e-134 483.8 459 61.4
Psat6g096400 Pisum sativum HOM05D004816 ORTHO05D006043 1.7e-134 483.8 476 60.5
Carub.0003s2975 Capsella rubella HOM05D004816 ORTHO05D006043 2.9e-134 483.0 532 54.5
Peaxi162Scf00003g02043 Petunia axillaris HOM05D004816 ORTHO05D006043 3.7e-134 482.6 465 58.9
Nitab4.5_0009440g0020 Nicotiana tabacum HOM05D004816 ORTHO05D006043 4.9e-134 482.3 524 56.5
BcaC01g03051 Brassica carinata HOM05D004816 ORTHO05D006043 6.4e-134 481.9 533 54.8
C03p56660 Brassica napus HOM05D004816 ORTHO05D006043 6.4e-134 481.9 533 54.8
PGR142G0866 Punica granatum HOM05D004816 ORTHO05D006043 1.4e-133 480.7 530 57.5
Aa31LG8G13390 Aethionema arabicum HOM05D004816 ORTHO05D006043 4.1e-133 479.2 537 54.2
MSTRG.20129 Avicennia marina HOM05D004816 ORTHO05D006043 3.5e-132 476.1 523 54.7
BcaC06g36093 Brassica carinata HOM05D004816 ORTHO05D006043 3.5e-132 476.1 473 57.3
BolC3t17950H Brassica oleracea HOM05D004816 ORTHO05D006043 1.1e-130 471.1 549 53.2
CARHR106200 Cardamine hirsuta HOM05D004816 ORTHO05D006043 1.5e-130 470.7 537 53.4
PGSC0003DMG400006219 Solanum tuberosum HOM05D004816 ORTHO05D006043 1.9e-130 470.3 473 56.9
BraA07t28285Z Brassica rapa HOM05D004816 ORTHO05D006043 7.3e-130 468.4 490 56.1
BcaB03g16336 Brassica carinata HOM05D004816 ORTHO05D006043 9.5e-130 468.0 537 52.7
C07p07890 Brassica napus HOM05D004816 ORTHO05D006043 9.5e-130 468.0 483 56.1
BolC7t41207H Brassica oleracea HOM05D004816 ORTHO05D006043 9.5e-130 468.0 483 56.1
Nitab4.5_0013034g0040 Nicotiana tabacum HOM05D004816 ORTHO05D006043 1.6e-129 467.2 471 56.9
VMungo1215G1045 Vigna mungo HOM05D004816 ORTHO05D006043 2.8e-129 466.5 415 62.2
Nitab4.5_0001401g0100 Nicotiana tabacum HOM05D004816 ORTHO05D006043 1.8e-128 463.8 416 60.3
FAN15G1865 Fragaria x ananassa HOM05D004816 ORTHO05D006043 2.3e-128 463.4 416 63.7
FAN27G2465 Fragaria x ananassa HOM05D004816 ORTHO05D006043 5.2e-128 462.2 417 63.8
vmacro19471 Vaccinium macrocarpon HOM05D004816 ORTHO05D006043 1.2e-127 461.1 418 61.7
THA.LOC104807346 Tarenaya hassleriana HOM05D004816 ORTHO05D006043 5.8e-127 458.8 475 57.1
AUR62011413 Chenopodium quinoa HOM05D004816 ORTHO05D006043 1.7e-126 457.2 470 57.0
BraA03t13693Z Brassica rapa HOM05D004816 ORTHO05D006043 6.4e-126 455.3 547 52.1
THA.LOC104819592 Tarenaya hassleriana HOM05D004816 ORTHO05D006043 8.4e-126 454.9 468 57.3
AUR62016646 Chenopodium quinoa HOM05D004816 ORTHO05D006043 1.1e-125 454.5 518 54.6
BcaB08g34612 Brassica carinata HOM05D004816 ORTHO05D006043 3.2e-125 453.0 532 51.7
ATR0733G051 Amborella trichopoda HOM05D004816 ORTHO05D006043 9.2e-125 451.4 411 59.9
DCAR_022069 Daucus carota HOM05D004816 ORTHO05D006043 1.6e-124 450.7 456 58.6
A03p45610 Brassica napus HOM05D004816 ORTHO05D006043 4.6e-124 449.1 542 51.7
SalBow6G5269 Salvia bowleyana HOM05D004816 ORTHO05D006043 1.7e-123 447.2 527 52.2
Migut.B00299 Erythranthe guttata HOM05D004816 ORTHO05D006043 2.3e-123 446.8 511 54.0
Thhalv10022638m.g Eutrema salsugineum HOM05D004816 ORTHO05D006043 3.0e-123 446.4 564 50.4
MSTRG.16772 Avicennia marina HOM05D004816 ORTHO05D006043 6.6e-123 445.3 500 55.8
Cc02_g18320 Coffea canephora HOM05D004816 ORTHO05D006043 2.5e-122 443.4 397 61.7
HanXRQChr10g0303411 Helianthus annuus HOM05D004816 ORTHO05D006043 1.6e-121 440.7 471 55.0
Hund06195 Selenicereus undatus HOM05D004816 ORTHO05D006043 1.1e-120 438.0 418 59.8
HPP92_019907 Vanilla planifolia HOM05D004816 ORTHO05D006043 1.1e-120 438.0 469 53.7
ECA234G4099 Erigeron canadensis HOM05D004816 ORTHO05D006043 1.6e-116 424.1 410 59.0
Os03g0737900 Oryza sativa ssp. japonica HOM05D004816 ORTHO05D006043 2.1e-116 423.7 461 53.1
TAR381G0713 Trochodendron aralioides HOM05D004816 ORTHO05D006043 7.8e-116 421.8 347 68.0
EL10Ac9g21805 Beta vulgaris HOM05D004816 ORTHO05D006043 3.0e-115 419.9 426 57.7
A07p04930 Brassica napus HOM05D004816 ORTHO05D006043 3.9e-115 419.5 398 58.8
CAN.G322.72 Capsicum annuum HOM05D004816 ORTHO05D006043 5.1e-115 419.1 394 58.6
Zm00001eb056520 Zea mays HOM05D004816 ORTHO05D006043 1.9e-114 417.2 441 53.1
Haze_02467 Corylus avellana HOM05D004816 ORTHO05D006043 2.5e-114 416.8 427 56.9
FAN24G2332 Fragaria x ananassa HOM05D004816 ORTHO05D006043 3.1e-112 409.8 407 59.7
Lj2g0017153 Lotus japonicus HOM05D004816 ORTHO05D001172 8.4e-110 401.7 366 61.7
Prupe.8G114000 Prunus persica HOM05D004816 ORTHO05D006043 1.6e-108 397.5 473 53.3
Lsat_1_v5_gn_5_117600 Lactuca sativa HOM05D004816 ORTHO05D006043 8.1e-105 385.2 393 55.2
QL06p000730 Quercus lobata HOM05D004816 ORTHO05D006043 4.9e-102 375.9 404 57.2
CDE06G1012 Ceratophyllum demersum HOM05D004816 ORTHO05D006043 7.9e-100 368.6 386 53.9
Cpa.g.sc62.70 Carica papaya HOM05D004816 ORTHO05D006043 8.1e-97 358.6 368 57.3
Mapoly0087s0083 Marchantia polymorpha HOM05D004816 ORTHO05D006043 6.0e-92 342.4 486 44.7
Pp3c4_2830 Physcomitrium patens HOM05D004816 ORTHO05D006043 4.3e-90 336.3 484 43.8
CDE04G3783 Ceratophyllum demersum HOM05D004816 ORTHO05D006043 1.8e-88 330.9 318 55.7
unitig_21.g20758 Utricularia gibba HOM05D004816 ORTHO05D006043 2.6e-87 327.0 558 39.8
SMO347G0163 Selaginella moellendorffii HOM05D004816 ORTHO05D006043 4.6e-84 316.2 474 41.1
RcHm_v2.0_Chr6g0259581 Rosa chinensis HOM05D004816 ORTHO05D006043 6.3e-81 305.8 265 66.0
QL08p015136 Quercus lobata HOM05D004816 ORTHO05D000106 5.3e-80 302.8 280 62.1
QL08p015067 Quercus lobata HOM05D004816 ORTHO05D000106 6.9e-80 302.4 280 62.1
Nitab4.5_0005466g0040 Nicotiana tabacum HOM05D004816 ORTHO05D006043 1.1e-77 295.0 307 58.6
SEGI_09196 Sequoiadendron giganteum HOM05D004816 ORTHO05D006043 1.0e-75 288.5 296 54.1
AagrBONN_evm.TU.Sc2ySwM_228.2260 Anthoceros agrestis HOM05D004816 ORTHO05D006043 3.1e-72 276.9 483 40.6
Oeu021929.4 Olea europaea HOM05D004816 ORTHO05D006043 4.5e-71 273.1 308 52.3
CSS0007305 Camellia sinensis var. sinensis HOM05D004816 ORTHO05D006043 2.6e-66 257.3 341 52.2
SHI18146 Sapria himalayana HOM05D004816 ORTHO05D006043 4.1e-64 250.0 621 35.6
Sc08g0000210 Simmondsia chinensis HOM05D004816 ORTHO05D006043 5.3e-64 249.6 235 57.0
CSS0019035 Camellia sinensis var. sinensis HOM05D004816 ORTHO05D006043 8.5e-62 242.3 308 54.2
RcHm_v2.0_Chr6g0259571 Rosa chinensis HOM05D004816 ORTHO05D006043 2.6e-50 204.1 179 63.7
Manes.15G144501 Manihot esculenta HOM05D004816 ORTHO05D006043 1.3e-46 191.8 175 65.1
Dinv42115 Davidia involucrata HOM05D004816 ORTHO05D000337 3.6e-44 183.7 467 34.9
Sc08g0000220 Simmondsia chinensis HOM05D004816 ORTHO05D006043 1.1e-40 172.2 164 59.1
Cpa.g.sc62.69 Carica papaya HOM05D004816 ORTHO05D006043 2.7e-39 167.5 146 58.9
Nitab4.5_0000876g0230 Nicotiana tabacum HOM05D000224 ORTHO05D000337 3.7e-33 147.1 161 54.0
TWI79G0508 Tripterygium wilfordii HOM05D004816 ORTHO05D006043 3.1e-27 127.5 109 62.4
Atru.chr13.510 Acer truncatum HOM05D004816 ORTHO05D006043 9.8e-26 122.5 107 63.6
Atru.chr8.2607 Acer truncatum HOM05D004816 ORTHO05D006043 9.8e-26 122.5 107 63.6
Oeu057669.2 Olea europaea HOM05D004816 ORTHO05D006043 5.4e-24 116.7 190 47.4
Gohir.A01G005566 Gossypium hirsutum HOM05D004816 ORTHO05D006043 1.9e-21 108.2 126 46.8
Lsat_1_v5_gn_4_68061 Lactuca sativa HOM05D004816 ORTHO05D006043 2.5e-21 107.8 180 44.4
Duzib052G0890 Durio zibethinus HOM05D004816 ORTHO05D006043 7.1e-16 89.7 70 67.1
arahy.Tifrunner.gnm1.ann1.MV8GC5 Arachis hypogaea HOM05D004816 ORTHO05D006043 2.7e-15 87.8 118 49.2
SEGI_20581 Sequoiadendron giganteum HOM05D004816 ORTHO05D006043 1.3e-14 85.5 113 48.7
DCAR_015855 Daucus carota HOM05D004816 ORTHO05D006043 3.3e-13 80.9 117 50.4
arahy.Tifrunner.gnm1.ann1.JF64TB Arachis hypogaea HOM05D004816 ORTHO05D006043 5.6e-13 80.1 99 55.6
CSS0032400 Camellia sinensis var. sinensis HOM05D001016 ORTHO05D016153 4.0e-11 73.9 154 38.3
Actinidia00469 Actinidia chinensis HOM05D004816 ORTHO05D006043 5.2e-11 73.6 76 55.3
Lsat_1_v5_gn_4_111080 Lactuca sativa HOM05D004816 ORTHO05D006043 5.2e-11 73.6 199 33.2
Atru.chr8.2606 Acer truncatum HOM05D004816 ORTHO05D006043 6.8e-11 73.2 57 63.2
Psat0s2233g0240 Pisum sativum HOM05D004816 ORTHO05D006043 8.9e-11 72.8 95 46.3
Sopen01g051070 Solanum pennellii HOM05D004816 ORTHO05D006043 3.8e-09 67.4 61 57.4
Cre06.g302850 Chlamydomonas reinhardtii HOM05D004816 ORTHO05D006043 9.2e-08 62.8 190 30.5
Sabra01G0122300 Salix brachista HOM05D000001 ORTHO05D004986 3.5e-07 60.8 97 45.4
CSS0012251 Camellia sinensis var. sinensis HOM05D000224 ORTHO05D006043 2.3e-06 58.2 126 43.7
CSS0045496 Camellia sinensis var. sinensis HOM05D001016 ORTHO05D016153 3.9e-06 57.4 153 36.6


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