Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_7G007730 Cucumis sativus L. HOM05D007571 ORTHO05D009439 1.4e-58 229.6 130 100.0
MELO3C018528.2 Cucumis melo HOM05D007571 ORTHO05D009439 1.2e-52 209.9 131 93.9
Sed0007395 Sechium edule HOM05D007571 ORTHO05D009439 1.4e-42 176.4 141 75.9
ClCG02G007100 Citrullus lanatus HOM05D007571 ORTHO05D009439 4.3e-39 164.9 137 74.5
Haze_10272 Corylus avellana HOM05D007571 ORTHO05D009439 7.0e-34 147.5 134 68.7
QL11p029955 Quercus lobata HOM05D007571 ORTHO05D009439 2.1e-33 146.0 136 64.7
Atru.chr5.2324 Acer truncatum HOM05D007571 ORTHO05D009439 2.3e-32 142.5 133 64.7
MD10G1108300 Malus domestica HOM05D007571 ORTHO05D009439 3.3e-31 138.7 136 62.5
Potri.001G292000 Populus trichocarpa HOM05D007571 ORTHO05D009439 4.3e-31 138.3 140 61.4
Duzib052G0547 Durio zibethinus HOM05D007571 ORTHO05D009439 9.5e-31 137.1 150 58.7
Ciclev10029547m.g Citrus clementina HOM05D007571 ORTHO05D009439 1.2e-30 136.7 141 59.6
Medtr1g106075 Medicago truncatula HOM05D007571 ORTHO05D009439 2.1e-30 136.0 135 63.0
TPR.G21146 Trifolium pratense HOM05D007571 ORTHO05D009439 2.8e-30 135.6 135 62.2
Glyma.10G256000 Glycine max HOM05D007571 ORTHO05D009439 4.7e-30 134.8 137 59.9
Carub.0001s3916 Capsella rubella HOM05D007571 ORTHO05D009439 6.2e-30 134.4 134 63.4
Thhalv10011862m.g Eutrema salsugineum HOM05D007571 ORTHO05D009439 1.4e-29 133.3 134 59.7
Prupe.8G147200 Prunus persica HOM05D007571 ORTHO05D009439 1.4e-29 133.3 136 59.6
RcHm_v2.0_Chr6g0252541 Rosa chinensis HOM05D007571 ORTHO05D009439 2.3e-29 132.5 136 60.3
AT1G49975 Arabidopsis thaliana HOM05D007571 ORTHO05D009439 4.0e-29 131.7 134 60.4
Eucgr.G01203 Eucalyptus grandis HOM05D007571 ORTHO05D009439 4.0e-29 131.7 138 58.7
TWI59G0511 Tripterygium wilfordii HOM05D007571 ORTHO05D009439 4.0e-29 131.7 137 56.2
AL1G57530 Arabidopsis lyrata HOM05D007571 ORTHO05D009439 6.8e-29 131.0 135 60.7
FvH4_2g03581 Fragaria vesca HOM05D007571 ORTHO05D009439 8.9e-29 130.6 136 58.8
Thecc.02G118900 Theobroma cacao HOM05D007571 ORTHO05D009439 8.9e-29 130.6 152 57.2
FAN20G2923 Fragaria x ananassa HOM05D007571 ORTHO05D009439 1.2e-28 130.2 136 58.1
Lalb_Chr21g0308001 Lupinus albus HOM05D007571 ORTHO05D009439 1.2e-28 130.2 134 61.2
Sp1g36830 Schrenkiella parvula HOM05D007571 ORTHO05D009439 1.5e-28 129.8 134 58.2
THA.LOC104825387 Tarenaya hassleriana HOM05D007571 ORTHO05D009439 1.5e-28 129.8 137 59.1
Gohir.D12G019350 Gossypium hirsutum HOM05D007571 ORTHO05D009439 2.0e-28 129.4 151 55.0
CANSAT25G0272 Cannabis sativa HOM05D007571 ORTHO05D009439 3.4e-28 128.6 137 57.7
CANSAT25G2750 Cannabis sativa HOM05D007571 ORTHO05D009439 3.4e-28 128.6 137 57.7
Gohir.A12G018900 Gossypium hirsutum HOM05D007571 ORTHO05D009439 7.5e-28 127.5 151 54.3
Lj5g0013426 Lotus japonicus HOM05D007571 ORTHO05D009439 2.9e-27 125.6 128 58.6
GSVIVG01037807001 Vitis vinifera HOM05D007571 ORTHO05D009439 3.7e-27 125.2 124 62.9
arahy.Tifrunner.gnm1.ann1.A1M8SQ Arachis hypogaea HOM05D007571 ORTHO05D009439 8.3e-27 124.0 131 55.7
Medtr3g008630 Medicago truncatula HOM05D007571 ORTHO05D009439 8.3e-27 124.0 135 58.5
PGR042G0328 Punica granatum HOM05D007571 ORTHO05D009439 1.4e-26 123.2 148 56.1
Phvul.007G046800 Phaseolus vulgaris HOM05D007571 ORTHO05D009439 1.9e-26 122.9 128 58.6
VMungo0720G0585 Vigna mungo HOM05D007571 ORTHO05D009439 2.4e-26 122.5 131 58.8
arahy.Tifrunner.gnm1.ann1.I40GDJ Arachis hypogaea HOM05D007571 ORTHO05D009439 3.2e-26 122.1 131 55.0
BcaB07g33447 Brassica carinata HOM05D007571 ORTHO05D009439 4.1e-26 121.7 132 58.3
A06p03470 Brassica napus HOM05D007571 ORTHO05D009439 4.1e-26 121.7 132 58.3
BraA06t23555Z Brassica rapa HOM05D007571 ORTHO05D009439 4.1e-26 121.7 132 58.3
COL.COLO4_32496 Corchorus olitorius HOM05D007571 ORTHO05D009439 1.2e-25 120.2 144 55.6
BcaC08g43171 Brassica carinata HOM05D007571 ORTHO05D009439 1.6e-25 119.8 132 56.8
C06p04720 Brassica napus HOM05D007571 ORTHO05D009439 2.1e-25 119.4 132 57.6
Sabra16G0182000 Salix brachista HOM05D007571 ORTHO05D009439 4.6e-25 118.2 177 46.9
Actinidia27996 Actinidia chinensis HOM05D007571 ORTHO05D009439 1.7e-24 116.3 122 56.6
CSS0048413 Camellia sinensis var. sinensis HOM05D007571 ORTHO05D009439 3.0e-24 115.5 131 55.0
Actinidia04391 Actinidia chinensis HOM05D007571 ORTHO05D009439 3.9e-24 115.2 123 56.9
Rhsim05G0092500 Rhododendron simsii HOM05D007571 ORTHO05D009439 2.5e-23 112.5 126 57.1
Cc02_g09420 Coffea canephora HOM05D007571 ORTHO05D009439 9.5e-23 110.5 122 54.9
vmacro19538 Vaccinium macrocarpon HOM05D007571 ORTHO05D009439 9.5e-23 110.5 97 64.9
Dinv15820 Davidia involucrata HOM05D007571 ORTHO05D009439 1.6e-22 109.8 99 65.7
Gorai.008G019700 Gossypium raimondii HOM05D005832 ORTHO05D007117 2.1e-22 109.4 150 50.0
TAR628G1270 Trochodendron aralioides HOM05D007571 ORTHO05D009439 2.1e-22 109.4 129 55.0
MBI16_g39621_MAGBIO Magnolia biondii HOM05D007571 ORTHO05D009439 1.1e-21 107.1 103 60.2
MBI16_g43666_MAGBIO Magnolia biondii HOM05D007571 ORTHO05D009439 1.1e-21 107.1 103 60.2
BolC6t35600H Brassica oleracea HOM05D007571 ORTHO05D009439 1.4e-21 106.7 161 47.2
ECA238G3778 Erigeron canadensis HOM05D007571 ORTHO05D009439 1.8e-21 106.3 88 64.8
DCAR_028375 Daucus carota HOM05D007571 ORTHO05D009439 2.4e-21 105.9 121 52.9
Gohir.D12G019400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 2.4e-21 105.9 142 52.8
Hund06510 Selenicereus undatus HOM05D007571 ORTHO05D009439 4.0e-21 105.1 133 51.9
Aqoxy6G02559 Aquilegia oxysepala HOM05D007571 ORTHO05D009439 5.2e-21 104.8 106 56.6
HanXRQChr02g0053531 Helianthus annuus HOM05D007571 ORTHO05D009439 6.8e-21 104.4 115 53.0
Nn6g34507 Nelumbo nucifera HOM05D007571 ORTHO05D009439 1.2e-20 103.6 91 65.9
Peaxi162Scf00519g00423 Petunia axillaris HOM05D007571 ORTHO05D009439 1.2e-20 103.6 117 53.8
Oeu024805.1 Olea europaea HOM05D007571 ORTHO05D009439 1.5e-20 103.2 121 50.4
Lsat_1_v5_gn_2_105800 Lactuca sativa HOM05D007571 ORTHO05D009439 2.0e-20 102.8 104 57.7
Sc05g0005590 Simmondsia chinensis HOM05D007571 ORTHO05D009439 2.0e-20 102.8 104 60.6
EL10Ac9g22184 Beta vulgaris HOM05D007571 ORTHO05D009439 2.6e-20 102.4 105 59.0
MSTRG.417 Avicennia marina HOM05D007571 ORTHO05D009439 4.4e-20 101.7 123 52.0
PSO675G4064 Papaver somniferum HOM05D007571 ORTHO05D009439 1.7e-19 99.8 130 47.7
Ah.01g007010 Amaranthus hybridus HOM05D007571 ORTHO05D009439 2.9e-19 99.0 92 62.0
Nitab4.5_0017347g0020 Nicotiana tabacum HOM05D007571 ORTHO05D009439 2.9e-19 99.0 124 52.4
CAN.G1433.5 Capsicum annuum HOM05D007571 ORTHO05D009439 4.9e-19 98.2 126 50.8
Solyc05g150152.1 Solanum lycopersicum HOM05D007571 ORTHO05D009439 4.9e-19 98.2 113 51.3
Nitab4.5_0000687g0180 Nicotiana tabacum HOM05D007571 ORTHO05D009439 1.1e-18 97.1 124 51.6
Sopen05g033610 Solanum pennellii HOM05D007571 ORTHO05D009439 1.1e-18 97.1 113 50.4
Migut.F01585 Erythranthe guttata HOM05D007571 ORTHO05D009439 1.9e-18 96.3 71 64.8
SalBow6G2573 Salvia bowleyana HOM05D007571 ORTHO05D009439 1.9e-18 96.3 123 51.2
PSO541G4064 Papaver somniferum HOM05D007571 ORTHO05D009439 2.4e-18 95.9 129 49.6
CDE04G1832 Ceratophyllum demersum HOM05D007571 ORTHO05D009439 1.6e-17 93.2 106 53.8
SEGI_38446 Sequoiadendron giganteum HOM05D007571 ORTHO05D009439 3.5e-17 92.0 97 55.7
CARHR040010 Cardamine hirsuta HOM05D007571 ORTHO05D009439 6.0e-17 91.3 65 72.3
CiPaw.05G019300 Carya illinoinensis HOM05D000470 ORTHO05D000348 6.0e-17 91.3 60 76.7
Os03g0731100 Oryza sativa ssp. japonica HOM05D007571 ORTHO05D009439 6.0e-17 91.3 91 58.2
AagrBONN_evm.TU.Sc2ySwM_228.3762 Anthoceros agrestis HOM05D007571 ORTHO05D009439 1.0e-16 90.5 95 54.7
AUR62030860 Chenopodium quinoa HOM05D007571 ORTHO05D009439 1.3e-16 90.1 135 47.4
ATR0739G046 Amborella trichopoda HOM05D007571 ORTHO05D009439 2.5e-15 85.9 63 73.0
SGA_v2.0_scaffold62G21311 Striga asiatica HOM05D007002 ORTHO05D008602 7.3e-15 84.3 57 71.9
Manes.07G054000 Manihot esculenta HOM05D007571 ORTHO05D009439 1.3e-14 83.6 88 63.6
Zm00001eb056210 Zea mays HOM05D007571 ORTHO05D009439 2.8e-14 82.4 103 50.5
PGSC0003DMG400023397 Solanum tuberosum HOM05D007571 ORTHO05D009439 4.8e-14 81.6 59 67.8
Pp3c17_8360 Physcomitrium patens HOM05D007571 ORTHO05D009439 1.7e-11 73.2 114 43.9
Aa31LG10G4150 Aethionema arabicum HOM05D007571 ORTHO05D009439 2.9e-11 72.4 90 51.1
CBR_g6736 Chara braunii HOM05D007571 ORTHO05D009439 2.9e-11 72.4 80 47.5
Potri.009G086400 Populus trichocarpa HOM05D007571 ORTHO05D009439 6.0e-09 64.7 86 53.5
SalBow6G2452 Salvia bowleyana HOM05D007571 ORTHO05D009439 2.8e-06 55.8 123 38.2


User provided reference genes

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