Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_7G006720 Cucumis sativus L. HOM05D004164 ORTHO05D004891 3.3e-181 638.3 321 100.0
MELO3C018623.2 Cucumis melo HOM05D004164 ORTHO05D004891 1.1e-173 613.2 313 98.1
ClCG09G015620 Citrullus lanatus HOM05D004164 ORTHO05D004891 9.2e-168 593.6 313 94.9
Sed0011830 Sechium edule HOM05D004164 ORTHO05D004891 1.6e-167 592.8 313 93.3
Potri.017G051800 Populus trichocarpa HOM05D004164 ORTHO05D004891 3.0e-150 535.4 313 82.7
Sabra17G0043400 Salix brachista HOM05D004164 ORTHO05D004891 2.1e-148 529.3 313 81.5
SabraUnG0002700 Salix brachista HOM05D004164 ORTHO05D004891 2.1e-148 529.3 313 81.5
arahy.Tifrunner.gnm1.ann1.XH6BES Arachis hypogaea HOM05D004164 ORTHO05D004891 8.1e-148 527.3 313 80.5
QL11p022503 Quercus lobata HOM05D004164 ORTHO05D004891 3.1e-147 525.4 315 78.7
Lalb_Chr20g0122971 Lupinus albus HOM05D004164 ORTHO05D004891 4.0e-147 525.0 313 78.9
Thecc.02G135100 Theobroma cacao HOM05D004164 ORTHO05D004891 5.2e-147 524.6 313 78.9
Eucgr.G00847 Eucalyptus grandis HOM05D004164 ORTHO05D004891 6.8e-147 524.2 313 78.6
Hma1.2p1_0784F.1_g217100 Hydrangea macrophylla HOM05D004164 ORTHO05D004891 6.8e-147 524.2 313 80.8
vmacro01837 Vaccinium macrocarpon HOM05D004164 ORTHO05D004891 8.9e-147 523.9 312 80.1
Duzib132G1201 Durio zibethinus HOM05D004164 ORTHO05D004891 1.5e-146 523.1 313 78.9
CSS0002795 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 2.0e-146 522.7 312 79.2
PGR042G3604 Punica granatum HOM05D004164 ORTHO05D004891 2.6e-146 522.3 312 79.5
Actinidia24002 Actinidia chinensis HOM05D004164 ORTHO05D004891 3.4e-146 521.9 313 80.2
CSS0040430 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 5.8e-146 521.2 312 78.8
BcaC01g02680 Brassica carinata HOM05D004164 ORTHO05D004891 1.3e-145 520.0 316 78.8
BolC3t18463H Brassica oleracea HOM05D004164 ORTHO05D004891 1.3e-145 520.0 316 78.8
AT5G64250 Arabidopsis thaliana HOM05D004164 ORTHO05D004891 2.2e-145 519.2 312 78.5
A06p30940 Brassica napus HOM05D004164 ORTHO05D004891 2.2e-145 519.2 316 78.5
BraA06t26033Z Brassica rapa HOM05D004164 ORTHO05D004891 2.2e-145 519.2 316 78.5
THA.LOC104799917 Tarenaya hassleriana HOM05D004164 ORTHO05D004891 2.9e-145 518.8 316 77.5
AL8G41570 Arabidopsis lyrata HOM05D004164 ORTHO05D004891 4.9e-145 518.1 312 78.5
CARHR278160 Cardamine hirsuta HOM05D004164 ORTHO05D004891 4.9e-145 518.1 313 78.0
Manes.07G033800 Manihot esculenta HOM05D004164 ORTHO05D004891 4.9e-145 518.1 313 80.2
Atru.chr6.1169 Acer truncatum HOM05D004164 ORTHO05D004891 6.4e-145 517.7 313 78.6
Gohir.D12G015900 Gossypium hirsutum HOM05D004164 ORTHO05D004891 6.4e-145 517.7 313 78.3
Gorai.008G016000 Gossypium raimondii HOM05D004164 ORTHO05D004891 6.4e-145 517.7 313 78.0
C03p62030 Brassica napus HOM05D004164 ORTHO05D004891 1.1e-144 516.9 316 78.5
Cfa005671 Carpinus fangiana HOM05D004164 ORTHO05D004891 1.1e-144 516.9 313 78.6
AL8G41600 Arabidopsis lyrata HOM05D004164 ORTHO05D004891 1.4e-144 516.5 312 78.2
Sp2g27310 Schrenkiella parvula HOM05D004164 ORTHO05D004891 1.4e-144 516.5 313 78.9
CANSAT11G1236 Cannabis sativa HOM05D004164 ORTHO05D004891 3.2e-144 515.4 313 78.6
Dinv24178 Davidia involucrata HOM05D004164 ORTHO05D004891 4.2e-144 515.0 313 78.9
Gohir.A12G015600 Gossypium hirsutum HOM05D004164 ORTHO05D004891 4.2e-144 515.0 313 77.6
GSVIVG01015759001 Vitis vinifera HOM05D004164 ORTHO05D004891 5.4e-144 514.6 313 78.0
Aa31LG1G17650 Aethionema arabicum HOM05D004164 ORTHO05D004891 7.1e-144 514.2 313 78.3
CiPaw.05G034200 Carya illinoinensis HOM05D004164 ORTHO05D004891 1.6e-143 513.1 315 77.8
TPR.G10321 Trifolium pratense HOM05D004164 ORTHO05D004891 1.6e-143 513.1 313 76.7
Thhalv10004559m.g Eutrema salsugineum HOM05D004164 ORTHO05D004891 2.1e-143 512.7 313 79.2
TWI14G1169 Tripterygium wilfordii HOM05D004164 ORTHO05D004891 3.5e-143 511.9 313 79.2
BcaB02g09775 Brassica carinata HOM05D004164 ORTHO05D004891 7.8e-143 510.8 316 77.5
Medtr3g069190 Medicago truncatula HOM05D004164 ORTHO05D004891 7.8e-143 510.8 313 77.3
DCAR_001777 Daucus carota HOM05D004164 ORTHO05D004891 1.0e-142 510.4 313 78.6
Prupe.8G064000 Prunus persica HOM05D004164 ORTHO05D004891 1.0e-142 510.4 313 76.7
Glyma.08G178100 Glycine max HOM05D004164 ORTHO05D004891 1.3e-142 510.0 313 76.0
Sopen01g047880 Solanum pennellii HOM05D004164 ORTHO05D004891 3.9e-142 508.4 313 77.3
Solyc01g105370.4 Solanum lycopersicum HOM05D004164 ORTHO05D004891 6.6e-142 507.7 313 77.3
Peaxi162Scf01060g00013 Petunia axillaris HOM05D004164 ORTHO05D004891 1.1e-141 506.9 313 77.6
PGSC0003DMG400012550 Solanum tuberosum HOM05D004164 ORTHO05D004891 1.9e-141 506.1 313 77.3
Carub.0008s2504 Capsella rubella HOM05D004164 ORTHO05D004891 3.3e-141 505.4 313 76.7
Ah.01g022180 Amaranthus hybridus HOM05D004164 ORTHO05D004891 4.3e-141 505.0 313 75.4
Ciclev10028812m.g Citrus clementina HOM05D004164 ORTHO05D004891 4.3e-141 505.0 313 75.4
RcHm_v2.0_Chr6g0271551 Rosa chinensis HOM05D004164 ORTHO05D004891 1.2e-140 503.4 313 76.7
Lj5A235T51 Lonicera japonica HOM05D004164 ORTHO05D004891 1.6e-140 503.1 313 76.0
Psat5g128640 Pisum sativum HOM05D004164 ORTHO05D004891 1.6e-140 503.1 313 77.0
Phvul.006G205400 Phaseolus vulgaris HOM05D004164 ORTHO05D004891 2.1e-140 502.7 313 75.4
VMungo0540G2402 Vigna mungo HOM05D004164 ORTHO05D004891 2.1e-140 502.7 313 75.7
Aqoxy6G02071 Aquilegia oxysepala HOM05D004164 ORTHO05D004891 2.8e-140 502.3 313 78.0
AUR62013150 Chenopodium quinoa HOM05D004164 ORTHO05D004891 2.8e-140 502.3 328 74.1
Cc02_g21290 Coffea canephora HOM05D004164 ORTHO05D004891 2.8e-140 502.3 313 75.1
Rhsim11G0139400 Rhododendron simsii HOM05D004164 ORTHO05D004891 4.7e-140 501.5 322 75.8
CAN.G523.53 Capsicum annuum HOM05D004164 ORTHO05D004891 8.1e-140 500.7 313 76.7
Nitab4.5_0000863g0200 Nicotiana tabacum HOM05D004164 ORTHO05D004891 1.4e-139 500.0 313 76.4
TAR381G0722 Trochodendron aralioides HOM05D004164 ORTHO05D004891 2.4e-139 499.2 313 76.0
Ca_16502_v3 Cicer arietinum L. HOM05D004164 ORTHO05D004891 4.0e-139 498.4 313 75.1
MSTRG.20292 Avicennia marina HOM05D004164 ORTHO05D004891 5.3e-139 498.0 313 76.4
HanXRQChr10g0291731 Helianthus annuus HOM05D004164 ORTHO05D004891 2.0e-138 496.1 313 73.2
ECA234G4615 Erigeron canadensis HOM05D004164 ORTHO05D004891 1.3e-137 493.4 313 72.5
Migut.B00589 Erythranthe guttata HOM05D004164 ORTHO05D004891 1.3e-137 493.4 314 77.1
TWI59G0238 Tripterygium wilfordii HOM05D004164 ORTHO05D004891 2.9e-137 492.3 313 76.4
Lsat_1_v5_gn_5_108141 Lactuca sativa HOM05D004164 ORTHO05D004891 4.9e-137 491.5 313 72.5
Hund00072 Selenicereus undatus HOM05D004164 ORTHO05D004891 4.9e-137 491.5 313 75.1
Sc08g0003530 Simmondsia chinensis HOM05D004164 ORTHO05D004891 5.4e-136 488.0 313 75.1
MD05G1043200 Malus domestica HOM05D004164 ORTHO05D004891 7.1e-136 487.6 313 74.8
arahy.Tifrunner.gnm1.ann1.IF3X13 Arachis hypogaea HOM05D004164 ORTHO05D004891 2.7e-135 485.7 313 75.1
Lj6g0000010 Lotus japonicus HOM05D004164 ORTHO05D004891 4.6e-135 485.0 313 73.5
ATR0782G002 Amborella trichopoda HOM05D004164 ORTHO05D004891 2.3e-134 482.6 318 72.0
FAN18G3873 Fragaria x ananassa HOM05D004164 ORTHO05D004891 2.3e-134 482.6 313 73.5
Gohir.A04G114200 Gossypium hirsutum HOM05D004164 ORTHO05D004891 3.0e-134 482.3 313 73.2
RcHm_v2.0_Chr6g0271711 Rosa chinensis HOM05D004164 ORTHO05D004891 3.0e-134 482.3 314 74.2
Lj4g0000280 Lotus japonicus HOM05D004164 ORTHO05D004891 5.1e-134 481.5 313 72.5
PSO210G2683 Papaver somniferum HOM05D004164 ORTHO05D004891 1.9e-133 479.6 313 73.5
SalBow5G1609 Salvia bowleyana HOM05D004164 ORTHO05D004891 3.3e-133 478.8 344 69.8
SalBow5G4318 Salvia bowleyana HOM05D004164 ORTHO05D004891 4.3e-133 478.4 344 70.1
Oeu007975.1 Olea europaea HOM05D004164 ORTHO05D004891 1.3e-132 476.9 386 62.4
Cpa.g.sc42.29 Carica papaya HOM05D004164 ORTHO05D004891 6.9e-131 471.1 332 70.2
Zm00001eb033580 Zea mays HOM05D004164 ORTHO05D004891 2.6e-130 469.2 316 71.5
Gorai.012G142600 Gossypium raimondii HOM05D004164 ORTHO05D004891 3.0e-126 455.7 313 69.6
EL10Ac9g21504 Beta vulgaris HOM05D004164 ORTHO05D004891 7.9e-119 431.0 313 66.1
Gohir.D04G155600 Gossypium hirsutum HOM05D004164 ORTHO05D004891 3.0e-118 429.1 313 66.5
FvH4_5g07040 Fragaria vesca HOM05D004164 ORTHO05D004891 2.3e-110 402.9 268 71.3
HPP92_004281 Vanilla planifolia HOM05D004164 ORTHO05D004891 2.3e-110 402.9 313 65.2
Os08g0485400 Oryza sativa ssp. japonica HOM05D004164 ORTHO05D004891 1.5e-109 400.2 270 68.5
SMO143G0159 Selaginella moellendorffii HOM05D004164 ORTHO05D004891 2.4e-107 392.9 316 61.1
Pp3c2_200 Physcomitrium patens HOM05D004164 ORTHO05D004891 1.5e-106 390.2 317 59.6
SGA_v2.0_scaffold83G26314 Striga asiatica HOM05D004164 ORTHO05D004891 4.5e-106 388.7 337 59.9
AUR62010154 Chenopodium quinoa HOM05D004164 ORTHO05D004891 5.9e-106 388.3 328 62.2
MBI02_g02171_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 1.0e-105 387.5 268 70.5
AagrBONN_evm.TU.Sc2ySwM_228.2787 Anthoceros agrestis HOM05D004164 ORTHO05D004891 1.2e-103 380.6 311 61.7
TAR365G1146 Trochodendron aralioides HOM05D004164 ORTHO05D004891 2.8e-100 369.4 316 58.9
Lj6g0021052 Lotus japonicus HOM05D004164 ORTHO05D004891 2.4e-99 366.3 225 75.6
Nn3g21861 Nelumbo nucifera HOM05D004164 ORTHO05D004891 1.2e-98 364.0 316 58.2
Mapoly0043s0005 Marchantia polymorpha HOM05D004164 ORTHO05D004891 2.2e-97 359.8 319 57.1
Nn4g25427 Nelumbo nucifera HOM05D004164 ORTHO05D004891 7.9e-95 351.3 318 54.1
PSO063G3797 Papaver somniferum HOM05D004164 ORTHO05D004891 3.9e-94 349.0 319 53.6
PSO832G0925 Papaver somniferum HOM05D004164 ORTHO05D004891 3.3e-93 345.9 321 56.1
FAN15G1714 Fragaria x ananassa HOM05D004164 ORTHO05D004891 1.7e-92 343.6 223 73.1
PSO210G6256 Papaver somniferum HOM05D004164 ORTHO05D004891 8.2e-92 341.3 316 54.1
Aqoxy2G03733 Aquilegia oxysepala HOM05D004164 ORTHO05D004891 1.4e-91 340.5 315 54.3
PSO173G0010 Papaver somniferum HOM05D004164 ORTHO05D004891 9.1e-91 337.8 316 52.8
PSO782G1386 Papaver somniferum HOM05D004164 ORTHO05D004891 9.1e-91 337.8 322 54.3
PSO832G1962 Papaver somniferum HOM05D004164 ORTHO05D004891 4.5e-90 335.5 318 54.1
PSO507G0030 Papaver somniferum HOM05D004164 ORTHO05D004891 1.4e-88 330.5 319 53.6
PSO210G5660 Papaver somniferum HOM05D004164 ORTHO05D004891 2.7e-87 326.2 316 51.9
PSO832G4194 Papaver somniferum HOM05D004164 ORTHO05D004891 1.4e-86 323.9 316 51.3
MBI18_g40410_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 5.2e-86 322.0 316 51.9
PSO761G0590 Papaver somniferum HOM05D004164 ORTHO05D004891 1.5e-85 320.5 316 51.3
PSO832G2156 Papaver somniferum HOM05D004164 ORTHO05D004891 1.5e-85 320.5 318 50.6
PSO507G0017 Papaver somniferum HOM05D004164 ORTHO05D004891 2.6e-85 319.7 316 51.3
Prupe.8G063800 Prunus persica HOM05D004164 ORTHO05D004891 5.3e-83 312.0 202 75.2
Haze_10597 Corylus avellana HOM05D004164 ORTHO05D004891 1.6e-82 310.5 233 67.0
MBI18_g36466_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 9.4e-80 301.2 317 50.2
PSO761G0549 Papaver somniferum HOM05D004164 ORTHO05D004891 6.1e-79 298.5 317 49.5
PSO781G0333 Papaver somniferum HOM05D004164 ORTHO05D004891 5.2e-78 295.4 316 49.4
PSO761G0410 Papaver somniferum HOM05D004164 ORTHO05D004891 8.3e-76 288.1 316 47.5
PSO173G0166 Papaver somniferum HOM05D004164 ORTHO05D004891 1.1e-72 277.7 264 51.9
Nitab4.5_0002401g0010 Nicotiana tabacum HOM05D004164 ORTHO05D004891 3.8e-65 252.7 148 81.1
PSO507G0015 Papaver somniferum HOM05D004164 ORTHO05D004891 2.6e-61 240.0 216 54.2
Actinidia26597 Actinidia chinensis HOM05D004164 ORTHO05D004891 9.5e-56 221.5 131 80.9
TPR.G9891 Trifolium pratense HOM05D004164 ORTHO05D004891 8.6e-49 198.4 149 65.8
Nn2g14913 Nelumbo nucifera HOM05D004164 ORTHO05D004891 1.6e-47 194.1 313 40.3
FvH4_2g11900 Fragaria vesca HOM05D004164 ORTHO05D004891 4.7e-47 192.6 126 71.4
FAN24G1884 Fragaria x ananassa HOM05D004164 ORTHO05D004891 3.1e-46 189.9 166 60.2
PSO646G0001 Papaver somniferum HOM05D004164 ORTHO05D004891 3.7e-44 183.0 163 53.4
MD05G1043700 Malus domestica HOM05D004164 ORTHO05D004891 4.9e-44 182.6 197 52.3
PSO541G2216 Papaver somniferum HOM05D004164 ORTHO05D004891 6.4e-44 182.2 182 50.5
TPR.G11284 Trifolium pratense HOM05D004164 ORTHO05D004891 1.4e-43 181.0 126 66.7
FvH4_2g11890 Fragaria vesca HOM05D004164 ORTHO05D004891 2.4e-43 180.3 136 66.2
FAN24G2526 Fragaria x ananassa HOM05D004164 ORTHO05D004891 7.1e-43 178.7 105 77.1
Pp3s30_626 Physcomitrium patens HOM05D004164 ORTHO05D004891 8.3e-36 155.2 356 33.1
TPR.G19821 Trifolium pratense HOM05D004164 ORTHO05D004891 9.2e-35 151.8 164 47.6
PRCOL_00000119 Prasinoderma coloniale HOM05D004164 ORTHO05D004891 6.8e-30 135.6 330 30.6
Prupe.8G063900 Prunus persica HOM05D004164 ORTHO05D004891 5.4e-27 125.9 79 69.6
Cfa023826 Carpinus fangiana HOM05D004164 ORTHO05D004891 2.3e-25 120.6 310 28.7
Cfa026765 Carpinus fangiana HOM05D004164 ORTHO05D004891 8.7e-25 118.6 338 29.3
MD10G1050600 Malus domestica HOM05D004164 ORTHO05D004891 1.6e-23 114.4 112 49.1
PSO400G0001 Papaver somniferum HOM05D004164 ORTHO05D004891 1.6e-23 114.4 98 53.1
TPR.G10092 Trifolium pratense HOM05D004164 ORTHO05D004891 3.8e-20 103.2 75 56.0
Cfa026889 Carpinus fangiana HOM05D004164 ORTHO05D004891 2.7e-18 97.1 338 28.1
COL.COLO4_01173 Corchorus olitorius HOM05D004164 ORTHO05D004891 2.3e-17 94.0 269 30.5
MCO10G397 Micromonas commoda HOM05D004164 ORTHO05D004891 1.1e-14 85.1 225 31.6
MBI02_g02172_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 1.3e-12 78.2 45 77.8
Nn5g30063 Nelumbo nucifera HOM05D004164 ORTHO05D004891 1.6e-10 71.2 41 85.4
CSS0002492 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 2.7e-10 70.5 41 82.9
Hma1.2p1_0784F.1_g217070 Hydrangea macrophylla HOM05D004164 ORTHO05D004891 3.5e-10 70.1 41 80.5
Zm00001eb051650 Zea mays HOM05D004164 ORTHO05D004891 6.0e-10 69.3 41 78.0
SGA_v2.0_scaffold72G24132 Striga asiatica HOM05D004164 ORTHO05D004891 3.9e-09 66.6 46 69.6
SGA_v2.0_scaffold48G17919 Striga asiatica HOM05D004164 ORTHO05D004891 5.1e-09 66.2 47 70.2
PRCOL_00002754 Prasinoderma coloniale HOM05D004164 ORTHO05D004891 8.7e-09 65.5 124 34.7
SGA_v2.0_scaffold47G17582 Striga asiatica HOM05D004164 ORTHO05D004891 1.5e-08 64.7 50 64.0
MBI18_g38521_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 1.3e-07 61.6 136 32.4
TAR019G0004 Trochodendron aralioides HOM05D004164 ORTHO05D004891 2.8e-07 60.5 42 69.0
TAR622G0536 Trochodendron aralioides HOM05D004164 ORTHO05D000005 6.9e-06 55.8 49 57.1


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