Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_7G004460 Cucumis sativus L. HOM05D008409 ORTHO05D010483 9.6e-83 310.1 152 100.0
MELO3C018733.2 Cucumis melo HOM05D008409 ORTHO05D010483 2.6e-80 302.0 152 97.4
ClCG07G002880 Citrullus lanatus HOM05D008409 ORTHO05D010483 3.2e-78 295.0 152 94.1
Sed0018099 Sechium edule HOM05D008409 ORTHO05D010483 9.6e-75 283.5 150 89.3
Haze_13167 Corylus avellana HOM05D008409 ORTHO05D010483 1.6e-66 256.1 152 75.0
Thecc.02G180200 Theobroma cacao HOM05D008409 ORTHO05D010483 2.0e-64 249.2 152 73.7
Atru.chr6.2992 Acer truncatum HOM05D008409 ORTHO05D010483 2.6e-64 248.8 152 74.3
QL08p038864 Quercus lobata HOM05D008409 ORTHO05D010483 1.4e-62 243.0 150 72.7
CiPaw.04G126300 Carya illinoinensis HOM05D008409 ORTHO05D010483 4.2e-62 241.5 152 69.7
Actinidia11031 Actinidia chinensis HOM05D008409 ORTHO05D010483 9.3e-62 240.4 152 69.1
Ciclev10017070m.g Citrus clementina HOM05D008409 ORTHO05D010483 1.6e-61 239.6 152 72.4
Potri.013G131000 Populus trichocarpa HOM05D008409 ORTHO05D010483 2.7e-61 238.8 152 72.4
Nn1g06548 Nelumbo nucifera HOM05D008409 ORTHO05D010483 4.6e-61 238.0 149 69.8
PGR142G1945 Punica granatum HOM05D008409 ORTHO05D010483 4.6e-61 238.0 152 70.4
Sabra13G0110600 Salix brachista HOM05D008409 ORTHO05D010483 1.3e-60 236.5 148 71.6
COL.COLO4_30195 Corchorus olitorius HOM05D008409 ORTHO05D010483 6.7e-60 234.2 141 73.0
Gorai.012G128600 Gossypium raimondii HOM05D008409 ORTHO05D010483 1.5e-59 233.0 153 68.0
Manes.12G089218 Manihot esculenta HOM05D008409 ORTHO05D010483 2.5e-59 232.3 147 70.1
GSVIVG01020550001 Vitis vinifera HOM05D008409 ORTHO05D010483 7.4e-59 230.7 150 69.3
Gohir.A04G103600 Gossypium hirsutum HOM05D008409 ORTHO05D010483 9.7e-59 230.3 153 67.3
TWI36G0630 Tripterygium wilfordii HOM05D008409 ORTHO05D010483 2.8e-58 228.8 152 67.1
Gohir.D04G143000 Gossypium hirsutum HOM05D008409 ORTHO05D010483 3.7e-58 228.4 153 67.3
TAR627G0101 Trochodendron aralioides HOM05D008409 ORTHO05D010483 4.8e-58 228.0 146 68.5
MD09G1247200 Malus domestica HOM05D008409 ORTHO05D010483 1.8e-57 226.1 149 69.1
Aqoxy1G02429 Aquilegia oxysepala HOM05D008409 ORTHO05D010483 2.4e-57 225.7 148 67.6
CAN.G578.4 Capsicum annuum HOM05D008409 ORTHO05D010483 1.7e-55 219.5 144 68.1
Peaxi162Scf00059g01918 Petunia axillaris HOM05D008409 ORTHO05D010483 1.7e-55 219.5 147 65.3
PSO675G8696 Papaver somniferum HOM05D008409 ORTHO05D010483 3.6e-53 211.8 147 64.6
Os08g0374000 Oryza sativa ssp. japonica HOM05D008409 ORTHO05D010483 3.0e-52 208.8 145 63.4
PGSC0003DMG400013143 Solanum tuberosum HOM05D008409 ORTHO05D010483 1.5e-51 206.5 148 61.5
PSO541G0816 Papaver somniferum HOM05D008409 ORTHO05D010483 2.0e-51 206.1 149 62.4
Solyc10g008330.4 Solanum lycopersicum HOM05D008409 ORTHO05D010483 1.3e-50 203.4 146 63.0
Sopen10g004190 Solanum pennellii HOM05D008409 ORTHO05D010483 2.8e-50 202.2 146 62.3
ATR0737G133 Amborella trichopoda HOM05D008409 ORTHO05D010483 1.1e-49 200.3 147 59.9
CSS0031688 Camellia sinensis var. sinensis HOM05D008409 ORTHO05D010483 2.0e-48 196.1 142 68.3
MBI06_g04179_MAGBIO Magnolia biondii HOM05D008409 ORTHO05D010483 3.8e-47 191.8 147 59.2
Nitab4.5_0009473g0020 Nicotiana tabacum HOM05D008409 ORTHO05D010483 3.6e-45 185.3 148 59.5
SEGI_00232 Sequoiadendron giganteum HOM05D008409 ORTHO05D010483 3.7e-42 175.3 154 53.9
vmacro12306 Vaccinium macrocarpon HOM05D008409 ORTHO05D010483 5.9e-40 167.9 119 64.7
Dinv23634 Davidia involucrata HOM05D008409 ORTHO05D010483 3.8e-39 165.2 101 73.3
QL08p038938 Quercus lobata HOM05D008409 ORTHO05D010483 5.3e-33 144.8 93 69.9
SMO332G0032 Selaginella moellendorffii HOM05D008409 ORTHO05D000186 8.6e-15 84.3 140 32.9
Pp3c2_27350 Physcomitrium patens HOM05D012277 ORTHO05D010483 1.0e-12 77.4 140 34.3
Dinv24891 Davidia involucrata HOM05D000197 ORTHO05D000114 5.2e-12 75.1 145 31.7
FvH4_4g34890 Fragaria vesca HOM05D000197 ORTHO05D000114 3.4e-11 72.4 149 32.9
FAN12G1601 Fragaria x ananassa HOM05D000197 ORTHO05D000114 3.4e-11 72.4 149 32.9
SMO141G0292 Selaginella moellendorffii HOM05D000322 ORTHO05D010483 5.7e-11 71.6 148 26.4
AagrBONN_evm.TU.Sc2ySwM_228.4478 Anthoceros agrestis HOM05D008409 ORTHO05D010483 9.8e-11 70.9 150 34.0
Migut.L01436 Erythranthe guttata HOM05D000197 ORTHO05D000114 9.8e-11 70.9 150 32.0
FAN17G2379 Fragaria x ananassa HOM05D000197 ORTHO05D000114 9.8e-11 70.9 149 32.2
Mapoly0131s0013 Marchantia polymorpha HOM05D008409 ORTHO05D010483 1.3e-10 70.5 147 29.9
Actinidia15014 Actinidia chinensis HOM05D000197 ORTHO05D000114 1.7e-10 70.1 144 31.9
Thhalv10008991m.g Eutrema salsugineum HOM05D000197 ORTHO05D000114 2.2e-10 69.7 146 32.2
AL1G37780 Arabidopsis lyrata HOM05D000197 ORTHO05D000114 4.9e-10 68.6 146 30.8
BcaB03g14124 Brassica carinata HOM05D000197 ORTHO05D000114 4.9e-10 68.6 146 31.5
Carub.0001s2344 Capsella rubella HOM05D000197 ORTHO05D000114 4.9e-10 68.6 146 31.5
AT1G24020 Arabidopsis thaliana HOM05D000197 ORTHO05D000114 6.4e-10 68.2 146 30.8
Pp3c8_12660 Physcomitrium patens HOM05D008409 ORTHO05D010483 6.4e-10 68.2 120 30.8
A07p13670 Brassica napus HOM05D000197 ORTHO05D000114 8.3e-10 67.8 146 31.5
C07p20100 Brassica napus HOM05D000197 ORTHO05D000114 8.3e-10 67.8 146 31.5
BolC7t42531H Brassica oleracea HOM05D000197 ORTHO05D000114 8.3e-10 67.8 146 31.5
BraA07t29119Z Brassica rapa HOM05D000197 ORTHO05D000114 8.3e-10 67.8 146 31.5
MD16G1024000 Malus domestica HOM05D000197 ORTHO05D000114 8.3e-10 67.8 151 29.1
vmacro16272 Vaccinium macrocarpon HOM05D000197 ORTHO05D000114 1.1e-09 67.4 144 34.0
BcaC06g35074 Brassica carinata HOM05D000197 ORTHO05D000114 1.8e-09 66.6 146 30.8
Pp3c7_19830 Physcomitrium patens HOM05D012277 ORTHO05D010483 1.8e-09 66.6 140 31.4
Pp3c7_19850 Physcomitrium patens HOM05D012277 ORTHO05D010483 1.8e-09 66.6 140 31.4
vmacro16271 Vaccinium macrocarpon HOM05D000197 ORTHO05D000114 3.2e-09 65.9 144 31.2
TAR629G0887 Trochodendron aralioides HOM05D000197 ORTHO05D000114 4.1e-09 65.5 137 29.9
GSVIVG01020183001 Vitis vinifera HOM05D000197 ORTHO05D000114 4.1e-09 65.5 144 29.2
Mapoly0151s0036 Marchantia polymorpha HOM05D000322 ORTHO05D000186 5.4e-09 65.1 142 27.5
Pp3c1_10460 Physcomitrium patens HOM05D012277 ORTHO05D010483 7.0e-09 64.7 126 33.3
MELO3C012016.2 Cucumis melo HOM05D000197 ORTHO05D000114 9.2e-09 64.3 144 30.6
CsaV3_5G031770 Cucumis sativus L. HOM05D000197 ORTHO05D000114 9.2e-09 64.3 137 31.4
CARHR024320 Cardamine hirsuta HOM05D000197 ORTHO05D000114 1.6e-08 63.5 144 28.5
Dinv31005 Davidia involucrata HOM05D000197 ORTHO05D000114 1.6e-08 63.5 144 30.6
Dinv31097 Davidia involucrata HOM05D000197 ORTHO05D000114 1.6e-08 63.5 144 30.6
ClCG05G025130 Citrullus lanatus HOM05D000197 ORTHO05D000114 2.0e-08 63.2 142 31.0
SMO141G0029 Selaginella moellendorffii HOM05D000322 ORTHO05D000186 2.0e-08 63.2 142 28.2
Aa31LG7G7810 Aethionema arabicum HOM05D000197 ORTHO05D000114 2.7e-08 62.8 146 30.1
A08p28340 Brassica napus HOM05D000197 ORTHO05D000114 2.7e-08 62.8 126 29.4
Lj3A1050T27 Lonicera japonica HOM05D000197 ORTHO05D000114 2.7e-08 62.8 148 33.8
Mapoly0063s0024 Marchantia polymorpha HOM05D008409 ORTHO05D010032 3.5e-08 62.4 91 40.7
Phvul.011G154100 Phaseolus vulgaris HOM05D001593 ORTHO05D010032 3.5e-08 62.4 153 30.7
Prupe.4G188300 Prunus persica HOM05D001593 ORTHO05D010032 7.8e-08 61.2 153 26.1
SalBow2G0136 Salvia bowleyana HOM05D001593 ORTHO05D002007 7.8e-08 61.2 124 31.5
SMO337G0049 Selaginella moellendorffii HOM05D000322 ORTHO05D000186 7.8e-08 61.2 150 25.3
SMO347G0071 Selaginella moellendorffii HOM05D008409 ORTHO05D010483 7.8e-08 61.2 131 31.3
Pp3c13_23010 Physcomitrium patens HOM05D012277 ORTHO05D010483 1.0e-07 60.8 132 28.8
Pp3c13_23030 Physcomitrium patens HOM05D012277 ORTHO05D010483 1.0e-07 60.8 132 28.8
unitig_22.g6474 Utricularia gibba HOM05D000197 ORTHO05D000114 1.0e-07 60.8 147 29.3
PSO384G3017 Papaver somniferum HOM05D000197 ORTHO05D000114 1.3e-07 60.5 131 32.1
Aa31LG7G7110 Aethionema arabicum HOM05D000197 ORTHO05D000114 1.7e-07 60.1 83 38.6
Aqoxy3G00935 Aquilegia oxysepala HOM05D000197 ORTHO05D000114 1.7e-07 60.1 150 26.0
Lalb_Chr19g0134421 Lupinus albus HOM05D001593 ORTHO05D010032 1.7e-07 60.1 152 24.3
SEGI_29216 Sequoiadendron giganteum HOM05D001593 ORTHO05D000001 2.3e-07 59.7 127 31.5
Dinv14414 Davidia involucrata HOM05D000197 ORTHO05D000114 3.9e-07 58.9 136 26.5
Pp3c11_13210 Physcomitrium patens HOM05D012277 ORTHO05D010483 3.9e-07 58.9 126 31.0
ECA246G2813 Erigeron canadensis HOM05D001593 ORTHO05D010032 5.0e-07 58.5 129 31.8
PSO782G5193 Papaver somniferum HOM05D000197 ORTHO05D000114 6.6e-07 58.2 164 24.4
Pp3c10_2750 Physcomitrium patens HOM05D012277 ORTHO05D010483 6.6e-07 58.2 118 32.2
Pp3c10_2760 Physcomitrium patens HOM05D012277 ORTHO05D010483 6.6e-07 58.2 118 32.2
TWI38G2157 Tripterygium wilfordii HOM05D001593 ORTHO05D010032 6.6e-07 58.2 124 29.0
Lalb_Chr03g0030461 Lupinus albus HOM05D001593 ORTHO05D010032 8.6e-07 57.8 131 27.5
Psat4g174160 Pisum sativum HOM05D001593 ORTHO05D010032 8.6e-07 57.8 156 25.6
RcHm_v2.0_Chr4g0441741 Rosa chinensis HOM05D000197 ORTHO05D000114 8.6e-07 57.8 149 27.5
VMungo1309G1650 Vigna mungo HOM05D001593 ORTHO05D010032 8.6e-07 57.8 155 27.1
Migut.E00440 Erythranthe guttata HOM05D000197 ORTHO05D000114 1.1e-06 57.4 134 25.4
HanXRQChr05g0156501 Helianthus annuus HOM05D001593 ORTHO05D010032 1.1e-06 57.4 152 27.6
PGR119G0429 Punica granatum HOM05D000197 ORTHO05D000114 1.1e-06 57.4 117 27.4
PSO210G0179 Papaver somniferum HOM05D000197 ORTHO05D000114 1.5e-06 57.0 160 23.1
PSO210G0188 Papaver somniferum HOM05D000197 ORTHO05D000114 1.5e-06 57.0 160 23.1
Lalb_Chr03g0030521 Lupinus albus HOM05D001593 ORTHO05D010032 1.9e-06 56.6 155 25.2
Oeu062656.1 Olea europaea HOM05D000197 ORTHO05D000114 1.9e-06 56.6 136 22.8
Potri.011G127800 Populus trichocarpa HOM05D001593 ORTHO05D010032 1.9e-06 56.6 150 24.7
TPR.G7332 Trifolium pratense HOM05D001593 ORTHO05D010032 1.9e-06 56.6 151 27.8
PSO063G1267 Papaver somniferum HOM05D000197 ORTHO05D000114 2.5e-06 56.2 171 24.6
PSO339G2973 Papaver somniferum HOM05D000197 ORTHO05D000114 2.5e-06 56.2 133 29.3
PSO478G3712 Papaver somniferum HOM05D000197 ORTHO05D000114 2.5e-06 56.2 138 29.7
Sabra16G0267000 Salix brachista HOM05D001593 ORTHO05D010032 3.3e-06 55.8 111 27.9
Sabra16G0268900 Salix brachista HOM05D001593 ORTHO05D010032 3.3e-06 55.8 111 27.9
Hund01084 Selenicereus undatus HOM05D008409 ORTHO05D010483 3.3e-06 55.8 41 61.0
THA.LOC104822191 Tarenaya hassleriana HOM05D000197 ORTHO05D000114 3.3e-06 55.8 123 30.9
BcaC07g39184 Brassica carinata HOM05D000197 ORTHO05D000114 4.3e-06 55.5 126 27.8
C08p21740 Brassica napus HOM05D000197 ORTHO05D000114 4.3e-06 55.5 126 27.8
BolC8t49812H Brassica oleracea HOM05D000197 ORTHO05D000114 4.3e-06 55.5 126 27.8
Eucgr.F03348 Eucalyptus grandis HOM05D001593 ORTHO05D010032 4.3e-06 55.5 153 24.8
Potri.001G405600 Populus trichocarpa HOM05D001593 ORTHO05D010032 4.3e-06 55.5 153 22.9
Sed0020136 Sechium edule HOM05D000197 ORTHO05D000114 4.3e-06 55.5 137 29.2
Eucgr.F03349 Eucalyptus grandis HOM05D001593 ORTHO05D010032 5.6e-06 55.1 153 24.8
PSO210G1827 Papaver somniferum HOM05D000197 ORTHO05D000114 5.6e-06 55.1 141 23.4
Aqoxy1G02445 Aquilegia oxysepala HOM05D001593 ORTHO05D002007 7.3e-06 54.7 149 25.5
Aqoxy3G00921 Aquilegia oxysepala HOM05D001593 ORTHO05D002007 7.3e-06 54.7 120 30.0
FvH4_4g32760 Fragaria vesca HOM05D000197 ORTHO05D000114 7.3e-06 54.7 149 26.8
FAN12G1963 Fragaria x ananassa HOM05D000197 ORTHO05D000114 7.3e-06 54.7 149 26.8
Mapoly0063s0020 Marchantia polymorpha HOM05D001593 ORTHO05D010032 7.3e-06 54.7 91 36.3
Phvul.011G153600 Phaseolus vulgaris HOM05D001593 ORTHO05D010032 7.3e-06 54.7 154 24.7
SalBow7G3151 Salvia bowleyana HOM05D001593 ORTHO05D010032 7.3e-06 54.7 153 26.8
BraA08t34765Z Brassica rapa HOM05D000197 ORTHO05D000114 9.5e-06 54.3 74 37.8
PSO063G5952 Papaver somniferum HOM05D000197 ORTHO05D000114 9.5e-06 54.3 132 29.5
PSO210G4090 Papaver somniferum HOM05D000798 ORTHO05D000659 9.5e-06 54.3 162 22.2
PSO384G1892 Papaver somniferum HOM05D000197 ORTHO05D000114 9.5e-06 54.3 131 30.5


User provided reference genes

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