Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_7G003160 Cucumis sativus L. HOM05D007603 ORTHO05D009604 1.8e-103 379.4 216 100.0
MELO3C018861.2 Cucumis melo HOM05D007603 ORTHO05D009604 6.6e-69 264.6 168 82.7
ClCG02G002280 Citrullus lanatus HOM05D007603 ORTHO05D009604 7.3e-60 234.6 168 73.8
Sed0002279 Sechium edule HOM05D007603 ORTHO05D009604 2.3e-37 159.8 172 59.9
Sed0026242 Sechium edule HOM05D007603 ORTHO05D009604 1.5e-36 157.1 168 60.7
Thecc.02G187900 Theobroma cacao HOM05D007603 ORTHO05D009604 3.3e-28 129.4 177 49.2
CiPaw.03G182900 Carya illinoinensis HOM05D007603 ORTHO05D009604 7.4e-28 128.3 173 50.3
Atru.chr6.2855 Acer truncatum HOM05D007603 ORTHO05D009604 2.1e-27 126.7 174 49.4
Manes.13G141000 Manihot esculenta HOM05D007603 ORTHO05D009604 2.4e-26 123.2 173 48.6
QL08p040785 Quercus lobata HOM05D007603 ORTHO05D009604 2.6e-25 119.8 144 48.6
Haze_13265 Corylus avellana HOM05D007603 ORTHO05D009604 5.8e-25 118.6 174 44.8
Potri.013G072200 Populus trichocarpa HOM05D007603 ORTHO05D009604 9.9e-25 117.9 171 46.2
Potri.013G120700 Populus trichocarpa HOM05D007603 ORTHO05D009604 2.2e-24 116.7 171 46.8
Ciclev10017455m.g Citrus clementina HOM05D007603 ORTHO05D009604 1.1e-23 114.4 180 46.1
TWI23G0636 Tripterygium wilfordii HOM05D007603 ORTHO05D009604 3.2e-23 112.8 183 45.4
Sabra13G0102000 Salix brachista HOM05D007603 ORTHO05D009604 7.9e-22 108.2 171 46.2
Sabra13G0062200 Salix brachista HOM05D007603 ORTHO05D009604 2.3e-21 106.7 172 44.2
Aqoxy1G02256 Aquilegia oxysepala HOM05D007603 ORTHO05D009604 8.7e-21 104.8 202 44.6
Gohir.D02G176900 Gossypium hirsutum HOM05D007603 ORTHO05D009604 1.9e-20 103.6 172 44.8
Gohir.A03G153900 Gossypium hirsutum HOM05D007603 ORTHO05D009604 2.5e-20 103.2 169 44.4
Dinv39835 Davidia involucrata HOM05D007603 ORTHO05D009604 4.3e-20 102.4 172 41.3
Lalb_Chr14g0367241 Lupinus albus HOM05D007603 ORTHO05D009604 1.3e-19 100.9 177 40.7
Actinidia10989 Actinidia chinensis HOM05D007603 ORTHO05D009604 4.8e-19 99.0 158 43.0
arahy.Tifrunner.gnm1.ann1.76DKB4 Arachis hypogaea HOM05D007603 ORTHO05D009604 4.8e-19 99.0 174 44.8
arahy.Tifrunner.gnm1.ann1.M59RYT Arachis hypogaea HOM05D007603 ORTHO05D009604 4.8e-19 99.0 174 44.8
Prupe.3G128600 Prunus persica HOM05D007603 ORTHO05D009604 8.1e-19 98.2 177 42.4
CSS0037684 Camellia sinensis var. sinensis HOM05D007603 ORTHO05D009604 1.4e-18 97.4 179 42.5
CAN.G1543.2 Capsicum annuum HOM05D007603 ORTHO05D009604 1.4e-18 97.4 173 48.0
TWI14G0603 Tripterygium wilfordii HOM05D007603 ORTHO05D009604 5.3e-18 95.5 169 48.5
Dinv06842 Davidia involucrata HOM05D007603 ORTHO05D009604 6.9e-18 95.1 126 48.4
vmacro12353 Vaccinium macrocarpon HOM05D007603 ORTHO05D009604 6.9e-18 95.1 124 51.6
Cpa.g.sc50.10 Carica papaya HOM05D007603 ORTHO05D009604 1.2e-17 94.4 192 38.0
Aa31sc35G40 Aethionema arabicum HOM05D007603 ORTHO05D009604 4.5e-17 92.4 187 36.4
BcaB02g07727 Brassica carinata HOM05D007603 ORTHO05D009604 4.5e-17 92.4 180 39.4
Hma1.2p1_0002F.1_g002370 Hydrangea macrophylla HOM05D007603 ORTHO05D009604 4.5e-17 92.4 184 40.8
PGR042G1843 Punica granatum HOM05D007603 ORTHO05D009604 2.9e-16 89.7 181 39.8
Oeu036085.1 Olea europaea HOM05D007603 ORTHO05D009604 4.2e-15 85.9 188 39.4
Carub.0005s2128 Capsella rubella HOM05D007603 ORTHO05D009604 7.1e-15 85.1 175 37.1
Lj3g0007744 Lotus japonicus HOM05D007603 ORTHO05D009604 7.1e-15 85.1 163 42.9
TPR.G6485 Trifolium pratense HOM05D007603 ORTHO05D009604 9.3e-15 84.7 171 40.9
MSTRG.14321 Avicennia marina HOM05D007603 ORTHO05D009604 1.2e-14 84.3 179 39.1
Sp5g07770 Schrenkiella parvula HOM05D007603 ORTHO05D009604 1.2e-14 84.3 194 35.6
Solyc07g150145.1 Solanum lycopersicum HOM05D007603 ORTHO05D009604 1.2e-14 84.3 186 43.5
Actinidia11119 Actinidia chinensis HOM05D007603 ORTHO05D009604 1.6e-14 84.0 123 48.0
SalBow7G0820 Salvia bowleyana HOM05D007603 ORTHO05D009604 1.6e-14 84.0 171 41.5
Psat5g274200 Pisum sativum HOM05D007603 ORTHO05D009604 2.1e-14 83.6 162 42.0
FAN14G3046 Fragaria x ananassa HOM05D007603 ORTHO05D016291 3.5e-14 82.8 169 39.6
Nitab4.5_0002629g0010 Nicotiana tabacum HOM05D007603 ORTHO05D009604 4.6e-14 82.4 131 45.0
Oeu016901.1 Olea europaea HOM05D007603 ORTHO05D009604 7.9e-14 81.6 184 40.2
Medtr2g090770 Medicago truncatula HOM05D007603 ORTHO05D009604 1.8e-13 80.5 168 38.7
Nn1g04268 Nelumbo nucifera HOM05D007603 ORTHO05D009604 1.8e-13 80.5 140 42.9
BraA07t29901Z Brassica rapa HOM05D007603 ORTHO05D009604 3.0e-13 79.7 174 36.2
BcaC08g44692 Brassica carinata HOM05D007603 ORTHO05D009604 1.1e-12 77.8 174 36.2
C06p22280 Brassica napus HOM05D007603 ORTHO05D009604 1.1e-12 77.8 174 36.2
BolC6t37414H Brassica oleracea HOM05D007603 ORTHO05D009604 1.1e-12 77.8 174 36.2
VMungo1080G0021 Vigna mungo HOM05D007603 ORTHO05D009604 1.1e-12 77.8 168 38.7
A07p22220 Brassica napus HOM05D007603 ORTHO05D009604 1.5e-12 77.4 174 35.6
DCAR_013048 Daucus carota HOM05D007603 ORTHO05D009604 1.9e-12 77.0 175 44.0
Thhalv10010720m.g Eutrema salsugineum HOM05D007603 ORTHO05D009604 2.5e-12 76.6 179 36.3
Nitab4.5_0006973g0020 Nicotiana tabacum HOM05D007603 ORTHO05D009604 2.5e-12 76.6 192 38.0
FAN02G2478 Fragaria x ananassa HOM05D007603 ORTHO05D009604 4.3e-12 75.9 169 42.0
Glyma.12G207700 Glycine max HOM05D007603 ORTHO05D009604 9.6e-12 74.7 172 36.6
Sopen07g027470 Solanum pennellii HOM05D007603 ORTHO05D009604 9.6e-12 74.7 133 42.9
PGSC0003DMG400009384 Solanum tuberosum HOM05D007603 ORTHO05D009604 9.6e-12 74.7 183 37.2
HanXRQChr08g0231781 Helianthus annuus HOM05D007603 ORTHO05D009604 1.3e-11 74.3 168 37.5
BcaC07g39795 Brassica carinata HOM05D007603 ORTHO05D009604 2.8e-11 73.2 139 38.1
Lsat_1_v5_gn_8_137160 Lactuca sativa HOM05D007603 ORTHO05D009604 2.8e-11 73.2 171 38.6
A09p47630 Brassica napus HOM05D007603 ORTHO05D009604 6.3e-11 72.0 139 38.1
PSO541G0270 Papaver somniferum HOM05D007603 ORTHO05D009604 1.8e-10 70.5 196 38.8
AL5G35760 Arabidopsis lyrata HOM05D007603 ORTHO05D009604 2.4e-10 70.1 191 34.0
AT3G54680 Arabidopsis thaliana HOM05D007603 ORTHO05D009604 2.4e-10 70.1 191 34.6
CARHR164600 Cardamine hirsuta HOM05D007603 ORTHO05D009604 3.1e-10 69.7 184 34.8
CDE10G0532 Ceratophyllum demersum HOM05D007603 ORTHO05D009604 3.1e-10 69.7 170 36.5
Glyma.13G293400 Glycine max HOM05D007603 ORTHO05D009604 5.3e-10 68.9 141 37.6
Phvul.005G099400 Phaseolus vulgaris HOM05D007603 ORTHO05D009604 5.3e-10 68.9 168 37.5
TAR626G1090 Trochodendron aralioides HOM05D001501 ORTHO05D001329 1.5e-09 67.4 96 45.8
BcaB01g00169 Brassica carinata HOM05D007603 ORTHO05D009604 4.5e-09 65.9 175 34.3
C08p29830 Brassica napus HOM05D007603 ORTHO05D009604 5.9e-09 65.5 132 37.1
THA.LOC104825256 Tarenaya hassleriana HOM05D007603 ORTHO05D009604 5.9e-09 65.5 182 34.1
THA.LOC104823514 Tarenaya hassleriana HOM05D007603 ORTHO05D009604 2.2e-08 63.5 202 31.7
BolC8t50594H Brassica oleracea HOM05D007603 ORTHO05D009604 3.8e-08 62.8 118 39.0
Hund07856 Selenicereus undatus HOM05D007603 ORTHO05D009604 5.0e-08 62.4 99 42.4
MBI06_g00805_MAGBIO Magnolia biondii HOM05D007603 ORTHO05D009604 6.5e-08 62.0 180 37.8
CDE10G1214 Ceratophyllum demersum HOM05D007603 ORTHO05D009604 1.9e-07 60.5 181 33.1
PSO675G7067 Papaver somniferum HOM05D007603 ORTHO05D009604 2.7e-06 56.6 200 36.5
Rhsim06G0135700 Rhododendron simsii HOM05D007603 ORTHO05D009604 3.6e-06 56.2 118 38.1


User provided reference genes

Program Settings