Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_7G002510 Cucumis sativus L. HOM05D006015 ORTHO05D007816 3.4e-266 921.0 435 100.0
MELO3C024194.2 Cucumis melo HOM05D006015 ORTHO05D007816 7.1e-256 886.7 437 95.7
ClCG02G002870 Citrullus lanatus HOM05D006015 ORTHO05D007816 4.5e-234 814.3 424 90.3
Sed0014474 Sechium edule HOM05D006015 ORTHO05D007816 1.1e-227 793.1 437 85.1
Sed0012767 Sechium edule HOM05D006015 ORTHO05D007816 8.5e-217 756.9 438 81.7
CiPaw.04G196900 Carya illinoinensis HOM05D006015 ORTHO05D007816 4.9e-188 661.4 425 71.8
MD09G1126500 Malus domestica HOM05D006015 ORTHO05D007816 2.4e-187 659.1 427 71.4
QL04p068533 Quercus lobata HOM05D006015 ORTHO05D007816 4.1e-187 658.3 425 71.5
COL.COLO4_33334 Corchorus olitorius HOM05D006015 ORTHO05D007816 5.9e-186 654.4 430 72.3
Potri.014G167200 Populus trichocarpa HOM05D006015 ORTHO05D007816 8.6e-185 650.6 436 70.4
Cfa014228 Carpinus fangiana HOM05D006015 ORTHO05D007816 2.5e-184 649.0 417 72.7
Duzib138G1954 Durio zibethinus HOM05D006015 ORTHO05D007816 3.3e-184 648.7 429 71.6
Gohir.A11G149000 Gossypium hirsutum HOM05D006015 ORTHO05D007816 5.6e-184 647.9 424 71.9
Thecc.01G195800 Theobroma cacao HOM05D006015 ORTHO05D007816 7.3e-184 647.5 429 71.1
MD17G1116800 Malus domestica HOM05D006015 ORTHO05D007816 9.5e-184 647.1 427 70.3
Sabra14G0127200 Salix brachista HOM05D006015 ORTHO05D007816 1.0e-182 643.7 426 70.9
Dinv26607 Davidia involucrata HOM05D006015 ORTHO05D007816 4.0e-182 641.7 424 70.3
Duzib211G0350 Durio zibethinus HOM05D006015 ORTHO05D007816 4.0e-182 641.7 426 70.4
Rhsim04G0027900 Rhododendron simsii HOM05D006015 ORTHO05D007816 4.0e-182 641.7 425 71.1
Gorai.007G166200 Gossypium raimondii HOM05D006015 ORTHO05D007816 2.0e-181 639.4 424 71.0
Gohir.D11G156100 Gossypium hirsutum HOM05D006015 ORTHO05D007816 5.8e-181 637.9 424 71.0
CSS0001355 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 9.8e-181 637.1 424 70.3
CSS0036117 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 9.8e-181 637.1 424 70.3
CSS0038739 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 9.8e-181 637.1 425 69.9
Gorai.001G221700 Gossypium raimondii HOM05D006015 ORTHO05D007816 9.8e-181 637.1 426 70.4
Lj6g0021297 Lotus japonicus HOM05D006015 ORTHO05D007816 3.7e-180 635.2 427 68.1
Manes.12G065800 Manihot esculenta HOM05D006015 ORTHO05D007816 4.9e-180 634.8 429 69.5
Nn3g19725 Nelumbo nucifera HOM05D006015 ORTHO05D007816 6.4e-180 634.4 424 69.3
Gohir.D07G198100 Gossypium hirsutum HOM05D006015 ORTHO05D007816 8.3e-180 634.0 426 70.2
Ca_25000_v3 Cicer arietinum L. HOM05D006015 ORTHO05D007816 1.1e-179 633.6 434 67.3
Ca_30801_v3 Cicer arietinum L. HOM05D006015 ORTHO05D007816 1.1e-179 633.6 434 67.3
Medtr1g046210 Medicago truncatula HOM05D006015 ORTHO05D007816 7.0e-179 630.9 425 68.9
Aqoxy1G04250 Aquilegia oxysepala HOM05D006015 ORTHO05D007816 1.2e-178 630.2 424 69.6
CANSAT64G2535 Cannabis sativa HOM05D006015 ORTHO05D007816 1.6e-178 629.8 428 69.4
TWI18G0302 Tripterygium wilfordii HOM05D006015 ORTHO05D007816 2.0e-178 629.4 431 68.9
Rhsim06G0176400 Rhododendron simsii HOM05D006015 ORTHO05D007816 2.7e-178 629.0 430 67.9
FAN14G1195 Fragaria x ananassa HOM05D006015 ORTHO05D007816 1.0e-177 627.1 423 67.6
FvH4_6g40640 Fragaria vesca HOM05D006015 ORTHO05D007816 1.3e-177 626.7 423 67.4
Psat6g109000 Pisum sativum HOM05D006015 ORTHO05D007816 1.3e-177 626.7 430 69.1
FAN02G2834 Fragaria x ananassa HOM05D006015 ORTHO05D007816 6.6e-177 624.4 423 67.4
PGR083G2314 Punica granatum HOM05D006015 ORTHO05D007816 8.6e-177 624.0 424 68.2
FAN09G3933 Fragaria x ananassa HOM05D006015 ORTHO05D007816 1.1e-176 623.6 423 67.1
RcHm_v2.0_Chr2g0156011 Rosa chinensis HOM05D006015 ORTHO05D007816 1.5e-176 623.2 415 67.2
TPR.G23976 Trifolium pratense HOM05D006015 ORTHO05D007816 1.5e-176 623.2 428 68.0
Ciclev10015287m.g Citrus clementina HOM05D006015 ORTHO05D007816 2.5e-176 622.5 426 68.3
VMungo0720G1520 Vigna mungo HOM05D006015 ORTHO05D007816 3.3e-176 622.1 428 68.7
Lalb_Chr03g0036841 Lupinus albus HOM05D006015 ORTHO05D007816 7.3e-176 620.9 432 66.4
Eucgr.H00879 Eucalyptus grandis HOM05D006015 ORTHO05D007816 9.5e-176 620.5 422 68.0
Lalb_Chr01g0011281 Lupinus albus HOM05D006015 ORTHO05D007816 9.5e-176 620.5 428 68.9
HanXRQChr11g0329021 Helianthus annuus HOM05D006015 ORTHO05D007816 1.2e-175 620.2 428 67.3
FAN05G5154 Fragaria x ananassa HOM05D006015 ORTHO05D007816 1.6e-175 619.8 423 67.1
DCAR_019683 Daucus carota HOM05D006015 ORTHO05D007816 3.6e-175 618.6 424 67.2
TWI75G1720 Tripterygium wilfordii HOM05D006015 ORTHO05D007816 3.6e-175 618.6 431 68.0
TAR629G2010 Trochodendron aralioides HOM05D006015 ORTHO05D007816 6.2e-175 617.8 425 67.5
ECA236G0403 Erigeron canadensis HOM05D006015 ORTHO05D007816 1.1e-174 617.1 430 67.0
Peaxi162Scf00802g00022 Petunia axillaris HOM05D006015 ORTHO05D007816 2.3e-174 615.9 428 67.5
Lsat_1_v5_gn_7_96920 Lactuca sativa HOM05D006015 ORTHO05D007816 8.9e-174 614.0 427 66.3
Phvul.007G239000 Phaseolus vulgaris HOM05D006015 ORTHO05D007816 1.5e-173 613.2 427 67.7
Cc08_g02360 Coffea canephora HOM05D006015 ORTHO05D007816 3.4e-173 612.1 431 67.1
Cpa.g.sc136.28 Carica papaya HOM05D006015 ORTHO05D007816 4.4e-173 611.7 422 66.8
Migut.K00073 Erythranthe guttata HOM05D006015 ORTHO05D007816 7.5e-173 610.9 430 66.0
THA.LOC104808847 Tarenaya hassleriana HOM05D006015 ORTHO05D007816 7.5e-173 610.9 426 66.0
MSTRG.10825 Avicennia marina HOM05D006015 ORTHO05D007816 9.8e-173 610.5 427 66.5
Glyma.10G128800 Glycine max HOM05D006015 ORTHO05D007816 1.3e-172 610.1 429 66.9
Atru.chr6.3393 Acer truncatum HOM05D006015 ORTHO05D007816 2.2e-172 609.4 420 67.9
Sc21g0000520 Simmondsia chinensis HOM05D006015 ORTHO05D007816 3.7e-172 608.6 424 65.8
Oeu064356.1 Olea europaea HOM05D006015 ORTHO05D007816 1.4e-171 606.7 430 66.5
Sp3g23770 Schrenkiella parvula HOM05D006015 ORTHO05D007816 1.6e-170 603.2 423 65.5
Nitab4.5_0001867g0080 Nicotiana tabacum HOM05D006015 ORTHO05D007816 1.0e-169 600.5 428 66.4
PSO210G7679 Papaver somniferum HOM05D006015 ORTHO05D007816 2.3e-169 599.4 426 65.7
Thhalv10002538m.g Eutrema salsugineum HOM05D006015 ORTHO05D007816 3.9e-169 598.6 424 64.9
PSO302G0043 Papaver somniferum HOM05D006015 ORTHO05D007816 3.9e-169 598.6 426 65.5
PGSC0003DMG400017397 Solanum tuberosum HOM05D006015 ORTHO05D007816 3.9e-169 598.6 425 66.1
AUR62029116 Chenopodium quinoa HOM05D006015 ORTHO05D007816 6.6e-169 597.8 423 65.0
MBI16_g07770_MAGBIO Magnolia biondii HOM05D006015 ORTHO05D007816 1.1e-168 597.0 433 64.7
MSTRG.6445 Avicennia marina HOM05D006015 ORTHO05D007816 1.5e-168 596.7 432 65.7
Hma1.2p1_0545F.1_g175930 Hydrangea macrophylla HOM05D006015 ORTHO05D007816 2.5e-168 595.9 358 74.9
Nitab4.5_0001701g0190 Nicotiana tabacum HOM05D006015 ORTHO05D007816 2.5e-168 595.9 419 66.3
Gohir.A07G191800 Gossypium hirsutum HOM05D006015 ORTHO05D007816 4.3e-168 595.1 426 67.1
Sopen07g024010 Solanum pennellii HOM05D006015 ORTHO05D007816 4.3e-168 595.1 425 65.9
Solyc07g045470.3 Solanum lycopersicum HOM05D006015 ORTHO05D007816 4.7e-167 591.7 425 65.2
Atru.BG.41.p Acer truncatum HOM05D006015 ORTHO05D007816 1.8e-166 589.7 355 74.4
vmacro12084 Vaccinium macrocarpon HOM05D006015 ORTHO05D007816 4.0e-166 588.6 345 76.2
ATR0827G116 Amborella trichopoda HOM05D006015 ORTHO05D007816 8.9e-166 587.4 431 63.1
BcaB08g34500 Brassica carinata HOM05D006015 ORTHO05D007816 2.0e-165 586.3 419 64.4
CAN.G177.8 Capsicum annuum HOM05D006015 ORTHO05D007816 2.0e-165 586.3 428 64.0
Ah.01g002640 Amaranthus hybridus HOM05D006015 ORTHO05D007816 9.9e-165 583.9 391 67.8
Carub.0003s2938 Capsella rubella HOM05D006015 ORTHO05D007816 1.7e-164 583.2 424 63.7
BcaC01g03165 Brassica carinata HOM05D006015 ORTHO05D007816 7.1e-163 577.8 419 65.2
BolC3t17819H Brassica oleracea HOM05D006015 ORTHO05D007816 1.2e-162 577.0 419 65.2
C03p55440 Brassica napus HOM05D006015 ORTHO05D007816 1.6e-162 576.6 419 64.9
unitig_37.g12711 Utricularia gibba HOM05D006015 ORTHO05D007816 2.7e-162 575.9 431 63.6
AL3G42830 Arabidopsis lyrata HOM05D006015 ORTHO05D007816 3.5e-162 575.5 423 62.6
AT2G05320 Arabidopsis thaliana HOM05D006015 ORTHO05D007816 1.0e-161 573.9 423 62.6
Os02g0798100 Oryza sativa ssp. japonica HOM05D006015 ORTHO05D007816 2.3e-161 572.8 363 70.2
Actinidia07868 Actinidia chinensis HOM05D006015 ORTHO05D007816 6.6e-161 571.2 425 64.0
Aa31LG8G11520 Aethionema arabicum HOM05D006015 ORTHO05D007816 1.9e-160 569.7 419 63.0
A03p44610 Brassica napus HOM05D006015 ORTHO05D007816 2.5e-160 569.3 423 63.4
BraA03t13594Z Brassica rapa HOM05D006015 ORTHO05D007816 2.5e-160 569.3 423 63.4
Lj8P135T89 Lonicera japonica HOM05D006015 ORTHO05D007816 3.3e-160 568.9 335 74.6
Lj1P796T26 Lonicera japonica HOM05D006015 ORTHO05D007816 5.6e-160 568.2 338 74.6
HPP92_001839 Vanilla planifolia HOM05D006015 ORTHO05D007816 1.6e-159 566.6 373 68.9
CARHR103100 Cardamine hirsuta HOM05D006015 ORTHO05D007816 3.6e-159 565.5 353 71.4
SGA_v2.0_scaffold94G28455 Striga asiatica HOM05D003478 ORTHO05D004196 4.7e-159 565.1 431 62.9
Zm00001eb192260 Zea mays HOM05D006015 ORTHO05D007816 1.8e-158 563.1 357 70.0
CDE05G3376 Ceratophyllum demersum HOM05D006015 ORTHO05D007816 2.4e-158 562.8 419 62.8
SHI10157 Sapria himalayana HOM05D006015 ORTHO05D007816 1.2e-154 550.4 358 67.3
AUR62015007 Chenopodium quinoa HOM05D006015 ORTHO05D007816 1.7e-153 546.6 401 63.3
Migut.J01779 Erythranthe guttata HOM05D006015 ORTHO05D007816 2.3e-153 546.2 425 62.4
SEGI_05803 Sequoiadendron giganteum HOM05D006015 ORTHO05D007816 5.1e-153 545.0 368 66.8
Nn1g02851 Nelumbo nucifera HOM05D006015 ORTHO05D007816 6.6e-153 544.7 414 62.6
Actinidia18833 Actinidia chinensis HOM05D006015 ORTHO05D007816 1.2e-141 507.3 429 58.5
Pp3c8_6700 Physcomitrium patens HOM05D006015 ORTHO05D007816 1.3e-137 493.8 416 56.0
Prupe.3G198000 Prunus persica HOM05D006015 ORTHO05D007816 1.1e-136 490.7 283 74.9
Pp3c12_25130 Physcomitrium patens HOM05D006015 ORTHO05D007816 1.5e-136 490.3 361 61.5
Glyma.20G080200 Glycine max HOM05D006015 ORTHO05D007816 4.0e-134 482.3 283 73.5
SMO358G0350 Selaginella moellendorffii HOM05D006015 ORTHO05D007816 8.4e-132 474.6 349 60.5
Mapoly0086s0006 Marchantia polymorpha HOM05D006015 ORTHO05D007816 9.0e-126 454.5 356 60.4
SalBow1G4868 Salvia bowleyana HOM05D006015 ORTHO05D007816 8.8e-113 411.4 343 59.5
SalBow6G1876 Salvia bowleyana HOM05D006015 ORTHO05D007816 2.3e-97 360.1 213 72.8
CBR_g52107 Chara braunii HOM05D006015 ORTHO05D000002 5.3e-94 349.0 277 57.8
MSTRG.26113 Avicennia marina HOM05D006015 ORTHO05D007816 2.0e-93 347.1 215 70.7
Hma1.2p1_0545F.1_g175940 Hydrangea macrophylla HOM05D006015 ORTHO05D007816 7.7e-93 345.1 210 72.9
AagrBONN_evm.TU.Sc2ySwM_368.1590 Anthoceros agrestis HOM05D006015 ORTHO05D007816 3.8e-92 342.8 361 47.9
EL10Ac8g18726 Beta vulgaris HOM05D006015 ORTHO05D007816 5.4e-62 242.7 233 54.5
EL10Ac9g21097 Beta vulgaris HOM05D006015 ORTHO05D006619 8.3e-55 218.8 375 37.6
Nn5g28971 Nelumbo nucifera HOM05D006015 ORTHO05D007816 1.3e-26 125.2 98 55.1
EL10Ac8g18725 Beta vulgaris HOM05D006015 ORTHO05D007816 4.0e-25 120.2 80 65.0
Actinidia35205 Actinidia chinensis HOM05D001060 ORTHO05D000905 1.7e-23 114.8 58 84.5
Aa31LG8G11540 Aethionema arabicum HOM05D006015 ORTHO05D007816 8.1e-18 95.9 139 38.1
Aa31LG8G11530 Aethionema arabicum HOM05D006015 ORTHO05D059074 7.2e-06 56.2 76 44.7


User provided reference genes

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