Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_7G002000 Cucumis sativus L. HOM05D007297 ORTHO05D009352 4.6e-219 764.2 380 100.0
MELO3C015706.2 Cucumis melo HOM05D007297 ORTHO05D009352 2.6e-209 731.9 380 96.1
ClCG02G003330 Citrullus lanatus HOM05D007297 ORTHO05D009352 8.9e-186 653.7 373 87.9
Sed0028195 Sechium edule HOM05D007297 ORTHO05D009352 4.3e-180 634.8 380 84.5
Thecc.02G146900 Theobroma cacao HOM05D007297 ORTHO05D009352 3.4e-121 439.1 381 60.1
CiPaw.05G093700 Carya illinoinensis HOM05D007297 ORTHO05D009352 5.8e-121 438.3 381 62.7
Prupe.8G180900 Prunus persica HOM05D007297 ORTHO05D009352 1.3e-120 437.2 341 63.3
MD10G1142400 Malus domestica HOM05D007297 ORTHO05D009352 6.5e-120 434.9 370 61.4
Dinv14179 Davidia involucrata HOM05D007297 ORTHO05D009352 1.2e-118 430.6 362 61.6
Potri.004G207400 Populus trichocarpa HOM05D007297 ORTHO05D009352 1.6e-118 430.3 323 66.9
FvH4_2g16900 Fragaria vesca HOM05D007297 ORTHO05D009352 7.9e-118 427.9 339 63.7
Duzib132G0252 Durio zibethinus HOM05D007297 ORTHO05D009352 3.0e-117 426.0 378 60.3
MD05G1140800 Malus domestica HOM05D007297 ORTHO05D009352 3.9e-117 425.6 342 62.6
RcHm_v2.0_Chr6g0281021 Rosa chinensis HOM05D007297 ORTHO05D009352 1.9e-116 423.3 383 60.6
CSS0008013 Camellia sinensis var. sinensis HOM05D007297 ORTHO05D009352 1.6e-115 420.2 292 70.2
QL11p056524 Quercus lobata HOM05D007297 ORTHO05D009352 2.8e-115 419.5 382 58.4
FAN15G2550 Fragaria x ananassa HOM05D007297 ORTHO05D009352 2.4e-114 416.4 318 65.1
GSVIVG01023865001 Vitis vinifera HOM05D007297 ORTHO05D009352 2.4e-114 416.4 384 58.3
Cfa010687 Carpinus fangiana HOM05D007297 ORTHO05D009352 3.1e-114 416.0 384 61.7
Gohir.D01G012700 Gossypium hirsutum HOM05D007297 ORTHO05D009352 5.3e-114 415.2 389 57.1
TWI79G0145 Tripterygium wilfordii HOM05D007297 ORTHO05D009352 9.0e-114 414.5 377 57.6
Gorai.002G014500 Gossypium raimondii HOM05D007297 ORTHO05D009352 1.2e-113 414.1 384 57.0
CANSAT25G3874 Cannabis sativa HOM05D007297 ORTHO05D009352 1.5e-113 413.7 338 60.9
Ciclev10028691m.g Citrus clementina HOM05D007297 ORTHO05D009352 1.5e-113 413.7 375 57.1
FAN27G2312 Fragaria x ananassa HOM05D007297 ORTHO05D009352 2.6e-113 412.9 328 63.1
PGR042G0917 Punica granatum HOM05D007297 ORTHO05D009352 4.5e-113 412.1 387 56.1
Manes.15G114700 Manihot esculenta HOM05D007297 ORTHO05D009352 7.7e-113 411.4 293 66.9
Gohir.A01G011500 Gossypium hirsutum HOM05D007297 ORTHO05D009352 6.5e-112 408.3 384 56.8
MD05G1140400 Malus domestica HOM05D007297 ORTHO05D009352 2.5e-108 396.4 376 56.6
vmacro23445 Vaccinium macrocarpon HOM05D007297 ORTHO05D009352 7.4e-108 394.8 282 68.1
TAR381G0094 Trochodendron aralioides HOM05D007297 ORTHO05D009352 4.8e-107 392.1 291 65.6
Rhsim05G0044900 Rhododendron simsii HOM05D007297 ORTHO05D009352 5.3e-106 388.7 395 52.4
Sopen10g027070 Solanum pennellii HOM05D007297 ORTHO05D009352 6.9e-106 388.3 301 63.5
COL.COLO4_33139 Corchorus olitorius HOM05D007297 ORTHO05D009352 1.5e-105 387.1 319 62.1
Oeu032716.1 Olea europaea HOM05D007297 ORTHO05D009352 3.4e-105 386.0 279 65.9
Nn5g31034 Nelumbo nucifera HOM05D007297 ORTHO05D009352 4.5e-105 385.6 297 62.6
PGSC0003DMG400016829 Solanum tuberosum HOM05D007297 ORTHO05D009352 5.9e-105 385.2 301 62.8
Solyc10g074580.2 Solanum lycopersicum HOM05D007297 ORTHO05D009352 1.0e-104 384.4 301 63.1
Eucgr.H04994 Eucalyptus grandis HOM05D007297 ORTHO05D009352 3.8e-104 382.5 387 54.3
AUR62010181 Chenopodium quinoa HOM05D007297 ORTHO05D009352 1.4e-103 380.6 310 61.0
EL10Ac9g21544 Beta vulgaris HOM05D007297 ORTHO05D009352 2.5e-103 379.8 310 59.4
DCAR_006267 Daucus carota HOM05D007297 ORTHO05D009352 3.2e-103 379.4 290 62.8
Phvul.007G061600 Phaseolus vulgaris HOM05D007297 ORTHO05D009352 5.5e-103 378.6 295 63.7
ECA233G4247 Erigeron canadensis HOM05D007297 ORTHO05D009352 9.4e-103 377.9 347 55.0
Aqoxy5G00964 Aquilegia oxysepala HOM05D007297 ORTHO05D009352 2.7e-102 376.3 373 55.5
Lsat_1_v5_gn_8_120880 Lactuca sativa HOM05D007297 ORTHO05D009352 2.7e-102 376.3 322 58.4
Hund06358 Selenicereus undatus HOM05D007297 ORTHO05D009352 6.1e-102 375.2 380 53.7
HanXRQChr16g0515151 Helianthus annuus HOM05D007297 ORTHO05D009352 7.9e-102 374.8 324 59.9
MBI05_g18176_MAGBIO Magnolia biondii HOM05D007297 ORTHO05D009352 1.0e-101 374.4 367 54.5
Nitab4.5_0001700g0150 Nicotiana tabacum HOM05D007297 ORTHO05D009352 2.3e-101 373.2 318 59.1
Lj5g0024553 Lotus japonicus HOM05D007297 ORTHO05D009352 3.9e-101 372.5 296 61.8
arahy.Tifrunner.gnm1.ann1.114EL0 Arachis hypogaea HOM05D007297 ORTHO05D009352 5.1e-101 372.1 299 63.2
AUR62013182 Chenopodium quinoa HOM05D007297 ORTHO05D009352 5.1e-101 372.1 380 52.9
PSO170G5512 Papaver somniferum HOM05D007297 ORTHO05D009352 6.7e-101 371.7 376 52.9
VMungo0720G0116 Vigna mungo HOM05D007297 ORTHO05D009352 2.0e-100 370.2 295 63.7
THA.LOC104804081 Tarenaya hassleriana HOM05D007297 ORTHO05D009352 5.7e-100 368.6 337 58.2
Glyma.10G244200 Glycine max HOM05D007297 ORTHO05D009352 4.8e-99 365.5 297 62.0
Migut.N01363 Erythranthe guttata HOM05D007297 ORTHO05D009352 1.1e-98 364.4 391 51.4
Sc18g0005810 Simmondsia chinensis HOM05D007297 ORTHO05D009352 1.8e-98 363.6 295 60.3
Ah.01g017630 Amaranthus hybridus HOM05D007297 ORTHO05D009352 3.1e-98 362.8 298 60.4
Thhalv10025549m.g Eutrema salsugineum HOM05D007297 ORTHO05D009352 9.1e-98 361.3 364 51.9
Psat6g204280 Pisum sativum HOM05D007297 ORTHO05D009352 9.1e-98 361.3 295 61.0
Sp7g37510 Schrenkiella parvula HOM05D007297 ORTHO05D009352 1.5e-97 360.5 330 55.2
Ca_10853_v3 Cicer arietinum L. HOM05D007297 ORTHO05D009352 3.5e-97 359.4 377 53.1
Peaxi162Scf00374g00734 Petunia axillaris HOM05D007297 ORTHO05D009352 7.7e-97 358.2 332 56.0
MSTRG.27611 Avicennia marina HOM05D007297 ORTHO05D009352 1.3e-96 357.5 338 54.1
AT4G38225 Arabidopsis thaliana HOM05D007297 ORTHO05D009352 2.9e-96 356.3 344 53.8
CARHR294010 Cardamine hirsuta HOM05D007297 ORTHO05D009352 5.0e-96 355.5 306 59.2
ATR0807G066 Amborella trichopoda HOM05D007297 ORTHO05D009352 1.4e-95 354.0 339 56.3
Carub.0007s0016 Capsella rubella HOM05D007297 ORTHO05D009352 5.5e-95 352.1 301 57.5
SalBow5G1065 Salvia bowleyana HOM05D007297 ORTHO05D009352 1.6e-94 350.5 385 52.5
AL7G10130 Arabidopsis lyrata HOM05D002051 ORTHO05D002041 2.7e-94 349.7 309 56.0
Medtr1g102880 Medicago truncatula HOM05D007297 ORTHO05D009352 2.7e-94 349.7 377 52.0
SalBow5G0092 Salvia bowleyana HOM05D007297 ORTHO05D009352 3.9e-93 345.9 384 52.1
BraA06t23859Z Brassica rapa HOM05D007027 ORTHO05D008765 7.4e-92 341.7 307 57.0
Cc09_g10870 Coffea canephora HOM05D007297 ORTHO05D009352 7.4e-92 341.7 335 53.7
A06p06480 Brassica napus HOM05D007027 ORTHO05D008765 1.7e-91 340.5 307 57.0
C05p07890 Brassica napus HOM05D007027 ORTHO05D008765 2.8e-91 339.7 325 55.1
BolC5t29540H Brassica oleracea HOM05D007027 ORTHO05D008765 2.8e-91 339.7 325 55.1
Actinidia32005 Actinidia chinensis HOM05D007297 ORTHO05D009352 4.1e-90 335.9 294 59.9
unitig_26.g9984 Utricularia gibba HOM05D007297 ORTHO05D009352 4.1e-90 335.9 296 57.4
arahy.Tifrunner.gnm1.ann1.F5MDAV Arachis hypogaea HOM05D007297 ORTHO05D009352 1.0e-88 331.3 396 49.7
Cpa.g.sc60.2 Carica papaya HOM05D007297 ORTHO05D009352 1.0e-88 331.3 239 65.7
Lj9A408T85 Lonicera japonica HOM05D007297 ORTHO05D009352 4.2e-87 325.9 240 67.1
SGA_v2.0_scaffold98G29306 Striga asiatica HOM05D007297 ORTHO05D009352 1.2e-86 324.3 352 51.4
Aa31LG6G16890 Aethionema arabicum HOM05D007297 ORTHO05D009352 4.7e-86 322.4 276 58.0
CSS0007337 Camellia sinensis var. sinensis HOM05D007297 ORTHO05D009352 3.7e-83 312.8 253 62.1
HPP92_012647 Vanilla planifolia HOM05D007297 ORTHO05D009352 2.9e-80 303.1 326 50.3
CDE05G3233 Ceratophyllum demersum HOM05D007297 ORTHO05D009352 8.0e-78 295.0 305 52.8
Zm00001eb002190 Zea mays HOM05D007297 ORTHO05D009352 7.7e-73 278.5 378 43.7
Os03g0128800 Oryza sativa ssp. japonica HOM05D007297 ORTHO05D009352 1.7e-72 277.3 300 47.7
Atru.chr5.3567 Acer truncatum HOM05D007297 ORTHO05D009352 4.9e-59 232.6 162 66.7
Mapoly0005s0259 Marchantia polymorpha HOM05D007297 ORTHO05D009352 3.5e-57 226.5 321 40.5
AagrBONN_evm.TU.Sc2ySwM_117.3353 Anthoceros agrestis HOM05D007297 ORTHO05D009352 1.7e-56 224.2 319 41.4
Pp3c17_19510 Physcomitrium patens HOM05D007297 ORTHO05D009352 1.6e-54 217.6 401 38.2
Hma1.2p1_0271F.1_g108750 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 2.4e-50 203.8 159 62.9
Hma1.2p1_1276F.1_g272150 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 1.8e-45 187.6 172 57.0
Pp3c2_4700 Physcomitrium patens HOM05D007297 ORTHO05D009352 4.9e-43 179.5 297 36.4
CBR_g49409 Chara braunii HOM05D001007 ORTHO05D008005 1.6e-41 174.5 224 43.3
SMO356G0187 Selaginella moellendorffii HOM05D007297 ORTHO05D009352 4.0e-37 159.8 302 32.8
AL7G47220 Arabidopsis lyrata HOM05D007297 ORTHO05D009352 8.9e-37 158.7 150 56.0
Hma1.2p1_1819F.1_g304100 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 1.2e-33 148.3 132 58.3
Cpa.g.sc2396.1 Carica papaya HOM05D007297 ORTHO05D009352 1.3e-30 138.3 106 61.3
MD11G1100600 Malus domestica HOM05D007297 ORTHO05D009352 4.8e-30 136.3 91 69.2
Hma1.2p1_0367F.1_g137160 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 6.0e-25 119.4 87 66.7
Cre12.g554600 Chlamydomonas reinhardtii HOM05D007297 ORTHO05D009352 7.3e-23 112.5 270 31.5
Hma1.2p1_0422F.1_g150110 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 1.8e-21 107.8 124 48.4
MCO13G078 Micromonas commoda HOM05D007297 ORTHO05D009352 1.1e-15 88.6 279 27.2


User provided reference genes

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