Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_7G001350 Cucumis sativus L. HOM05D004598 ORTHO05D005550 8.8e-254 879.8 441 100.0
MELO3C013319.2 Cucumis melo HOM05D004598 ORTHO05D005550 1.8e-243 845.5 456 93.6
ClCG02G003800 Citrullus lanatus HOM05D004598 ORTHO05D005550 1.5e-232 809.3 446 91.5
TAR624G0541 Trochodendron aralioides HOM05D004598 ORTHO05D005550 4.0e-182 641.7 438 71.9
RcHm_v2.0_Chr6g0279191 Rosa chinensis HOM05D004598 ORTHO05D005550 1.9e-179 632.9 437 69.8
Atru.chr3.3248 Acer truncatum HOM05D004598 ORTHO05D005550 5.5e-179 631.3 438 70.8
FAN15G2177 Fragaria x ananassa HOM05D004598 ORTHO05D005550 2.3e-177 625.9 437 69.1
FvH4_2g15820 Fragaria vesca HOM05D004598 ORTHO05D005550 5.1e-177 624.8 432 69.9
Prupe.8G170900 Prunus persica HOM05D004598 ORTHO05D005550 5.1e-177 624.8 435 70.8
FAN27G3211 Fragaria x ananassa HOM05D004598 ORTHO05D005550 1.1e-176 623.6 437 69.1
CSS0038935 Camellia sinensis var. sinensis HOM05D004598 ORTHO05D005550 1.3e-175 620.2 423 71.9
CSS0039662 Camellia sinensis var. sinensis HOM05D004598 ORTHO05D005550 1.3e-175 620.2 423 71.9
Ca_23979_v3 Cicer arietinum L. HOM05D004598 ORTHO05D005550 2.8e-175 619.0 423 71.4
MBI19_g29897_MAGBIO Magnolia biondii HOM05D004598 ORTHO05D005550 8.2e-175 617.5 448 68.3
MD05G1127200 Malus domestica HOM05D004598 ORTHO05D005550 1.4e-174 616.7 439 69.7
CiPaw.13G015900 Carya illinoinensis HOM05D004598 ORTHO05D005550 1.5e-173 613.2 423 70.4
Manes.14G169500 Manihot esculenta HOM05D004598 ORTHO05D005550 5.8e-173 611.3 424 70.0
Aqoxy3G01530 Aquilegia oxysepala HOM05D004598 ORTHO05D005550 1.0e-172 610.5 431 68.0
Aqoxy3G01523 Aquilegia oxysepala HOM05D004598 ORTHO05D005550 2.2e-172 609.4 419 69.2
Hma1.2p1_0315F.1_g122700 Hydrangea macrophylla HOM05D004598 ORTHO05D005550 2.9e-172 609.0 423 71.4
PGR004G0790 Punica granatum HOM05D004598 ORTHO05D005550 2.9e-172 609.0 422 70.4
Aqoxy6G02901 Aquilegia oxysepala HOM05D004598 ORTHO05D005550 3.8e-172 608.6 431 68.0
CSS0010665 Camellia sinensis var. sinensis HOM05D004598 ORTHO05D005550 8.4e-172 607.4 423 70.7
MBI02_g31690_MAGBIO Magnolia biondii HOM05D004598 ORTHO05D005550 8.4e-172 607.4 448 67.4
Phvul.005G043300 Phaseolus vulgaris HOM05D004598 ORTHO05D005550 8.4e-172 607.4 438 69.2
Actinidia02429 Actinidia chinensis HOM05D004598 ORTHO05D005550 1.9e-171 606.3 423 70.9
Potri.001G031500 Populus trichocarpa HOM05D004598 ORTHO05D005550 1.9e-171 606.3 416 70.2
THA.LOC104799567 Tarenaya hassleriana HOM05D004598 ORTHO05D005550 1.9e-171 606.3 438 69.2
TPR.G8530 Trifolium pratense HOM05D004598 ORTHO05D005550 1.9e-171 606.3 423 70.2
Sabra01G0022600 Salix brachista HOM05D004598 ORTHO05D005550 5.5e-171 604.7 423 69.5
PSO675G4488 Papaver somniferum HOM05D004598 ORTHO05D005550 2.7e-170 602.4 469 65.2
Ah.03g134220 Amaranthus hybridus HOM05D004598 ORTHO05D005550 4.6e-170 601.7 419 69.7
vmacro20477 Vaccinium macrocarpon HOM05D004598 ORTHO05D005550 6.0e-170 601.3 418 70.6
Thhalv10013575m.g Eutrema salsugineum HOM05D004598 ORTHO05D005550 1.0e-169 600.5 437 67.7
Thecc.04G114500 Theobroma cacao HOM05D004598 ORTHO05D005550 1.0e-169 600.5 423 69.5
VMungo1080G1126 Vigna mungo HOM05D004598 ORTHO05D005550 3.0e-169 599.0 441 68.3
COL.COLO4_05992 Corchorus olitorius HOM05D004598 ORTHO05D005550 6.7e-169 597.8 420 69.3
Sp6g23050 Schrenkiella parvula HOM05D004598 ORTHO05D005550 1.1e-168 597.0 423 69.7
Lj3g0020284 Lotus japonicus HOM05D004598 ORTHO05D005550 1.5e-168 596.7 423 68.8
Sed0007699 Sechium edule HOM05D004598 ORTHO05D005550 1.5e-168 596.7 344 86.3
SalBow6G7131 Salvia bowleyana HOM05D004598 ORTHO05D005550 3.3e-168 595.5 423 68.6
Aa31LG1G13300 Aethionema arabicum HOM05D004598 ORTHO05D005550 4.3e-168 595.1 436 67.4
Gorai.001G088100 Gossypium raimondii HOM05D004598 ORTHO05D005550 5.7e-168 594.7 423 69.0
Medtr8g040610 Medicago truncatula HOM05D004598 ORTHO05D005550 5.7e-168 594.7 423 69.5
TWI18G0003 Tripterygium wilfordii HOM05D004598 ORTHO05D005550 5.7e-168 594.7 429 69.7
AT5G22130 Arabidopsis thaliana HOM05D004598 ORTHO05D005550 1.3e-167 593.6 453 66.2
Gohir.D07G082500 Gossypium hirsutum HOM05D004598 ORTHO05D005550 1.3e-167 593.6 423 69.0
HanXRQChr03g0066861 Helianthus annuus HOM05D004598 ORTHO05D005550 2.2e-167 592.8 423 68.6
Cc07_g11450 Coffea canephora HOM05D004598 ORTHO05D005550 2.8e-167 592.4 437 67.0
AL6G33110 Arabidopsis lyrata HOM05D004598 ORTHO05D005550 3.7e-167 592.0 432 67.4
CARHR191400 Cardamine hirsuta HOM05D004598 ORTHO05D005550 4.8e-167 591.7 419 69.0
SalBow2G2153 Salvia bowleyana HOM05D004598 ORTHO05D005550 6.3e-167 591.3 426 68.3
Sc16g0001780 Simmondsia chinensis HOM05D004598 ORTHO05D005550 6.3e-167 591.3 419 68.5
Gohir.A07G077700 Gossypium hirsutum HOM05D004598 ORTHO05D005550 1.4e-166 590.1 423 68.1
BcaC03g13863 Brassica carinata HOM05D004598 ORTHO05D005550 5.3e-166 588.2 419 69.0
QL11p052661 Quercus lobata HOM05D004598 ORTHO05D005550 6.9e-166 587.8 449 65.5
AUR62026210 Chenopodium quinoa HOM05D004598 ORTHO05D005550 9.0e-166 587.4 440 65.9
Carub.0006s1977 Capsella rubella HOM05D004598 ORTHO05D005550 2.0e-165 586.3 419 68.5
Sopen02g028050 Solanum pennellii HOM05D004598 ORTHO05D005550 2.6e-165 585.9 423 67.6
BcaB05g22747 Brassica carinata HOM05D004598 ORTHO05D005550 3.4e-165 585.5 419 69.5
Eucgr.H00040 Eucalyptus grandis HOM05D004598 ORTHO05D005550 3.4e-165 585.5 423 68.8
Lalb_Chr01g0007411 Lupinus albus HOM05D004598 ORTHO05D005550 3.4e-165 585.5 424 68.9
Peaxi162Scf00300g00120 Petunia axillaris HOM05D004598 ORTHO05D005550 7.7e-165 584.3 423 68.3
PGSC0003DMG400001580 Solanum tuberosum HOM05D004598 ORTHO05D005550 2.2e-164 582.8 423 67.4
BraA02t05641Z Brassica rapa HOM05D004598 ORTHO05D005550 3.8e-164 582.0 419 68.0
C02p10690 Brassica napus HOM05D004598 ORTHO05D005550 5.0e-164 581.6 419 68.3
Solyc02g083260.3 Solanum lycopersicum HOM05D004598 ORTHO05D005550 6.5e-164 581.3 423 67.4
MSTRG.2598 Avicennia marina HOM05D004598 ORTHO05D005550 1.1e-163 580.5 441 65.3
BolC2t07140H Brassica oleracea HOM05D004598 ORTHO05D005550 2.5e-163 579.3 419 68.5
CAN.G890.18 Capsicum annuum HOM05D004598 ORTHO05D005550 2.5e-163 579.3 438 65.3
GSVIVG01017167001 Vitis vinifera HOM05D004598 ORTHO05D005550 4.2e-163 578.6 409 71.1
Migut.H02299 Erythranthe guttata HOM05D004598 ORTHO05D005550 7.2e-163 577.8 426 68.3
Duzib133G0026 Durio zibethinus HOM05D004598 ORTHO05D005550 1.6e-162 576.6 462 63.2
Hund05921 Selenicereus undatus HOM05D004598 ORTHO05D005550 1.6e-162 576.6 419 66.8
Glyma.08G159600 Glycine max HOM05D004598 ORTHO05D005550 3.6e-162 575.5 441 66.2
Cpa.g.sc9.382 Carica papaya HOM05D004598 ORTHO05D005550 3.9e-161 572.0 455 63.7
ATR0165G018 Amborella trichopoda HOM05D004598 ORTHO05D005550 2.0e-160 569.7 433 66.5
Rhsim11G0148800 Rhododendron simsii HOM05D004598 ORTHO05D005550 3.1e-158 562.4 423 67.4
Nitab4.5_0004259g0040 Nicotiana tabacum HOM05D004598 ORTHO05D005550 1.7e-156 556.6 488 59.0
HanXRQChr14g0454151 Helianthus annuus HOM05D004598 ORTHO05D005550 3.8e-156 555.4 393 69.0
Ciclev10001079m.g Citrus clementina HOM05D004598 ORTHO05D005550 1.1e-155 553.9 438 64.8
Aqoxy3G00619 Aquilegia oxysepala HOM05D004598 ORTHO05D005550 5.1e-153 545.0 431 63.1
Dinv08542 Davidia involucrata HOM05D004598 ORTHO05D005550 4.4e-152 542.0 409 67.5
Medtr1g058230 Medicago truncatula HOM05D004598 ORTHO05D005550 1.3e-148 530.4 414 64.5
AUR62026384 Chenopodium quinoa HOM05D004598 ORTHO05D005550 2.9e-148 529.3 381 66.4
Haze_02994 Corylus avellana HOM05D006110 ORTHO05D007774 1.4e-147 526.9 420 63.3
HPP92_002259 Vanilla planifolia HOM05D004598 ORTHO05D005550 3.6e-146 522.3 393 65.4
BcaC07g41302 Brassica carinata HOM05D004598 ORTHO05D005550 8.8e-145 517.7 399 65.2
BolC8t51865H Brassica oleracea HOM05D004598 ORTHO05D005550 3.3e-144 515.8 411 64.0
TPR.G6064 Trifolium pratense HOM05D004598 ORTHO05D005550 5.3e-142 508.4 423 62.2
Hma1.2p1_0315F.1_g122690 Hydrangea macrophylla HOM05D004598 ORTHO05D005550 1.1e-134 484.2 342 71.6
SEGI_01084 Sequoiadendron giganteum HOM05D004598 ORTHO05D005550 1.8e-134 483.4 378 63.8
Os03g0670200 Oryza sativa ssp. japonica HOM05D004598 ORTHO05D005550 1.2e-133 480.7 372 62.9
Oeu046543.3 Olea europaea HOM05D004598 ORTHO05D005550 5.9e-133 478.4 402 62.2
EL10Ac6g13343 Beta vulgaris HOM05D004598 ORTHO05D005550 1.0e-132 477.6 418 58.9
Cfa010950 Carpinus fangiana HOM05D006110 ORTHO05D007774 5.0e-132 475.3 336 70.8
Mapoly0079s0001 Marchantia polymorpha HOM05D004598 ORTHO05D005550 6.5e-132 474.9 411 56.9
AagrBONN_evm.TU.Sc2ySwM_368.2499 Anthoceros agrestis HOM05D004598 ORTHO05D005550 3.6e-130 469.2 417 57.8
CDE02G1977 Ceratophyllum demersum HOM05D004598 ORTHO05D005550 1.4e-129 467.2 348 67.5
arahy.Tifrunner.gnm1.ann1.K5F1ZR Arachis hypogaea HOM05D004598 ORTHO05D005550 5.2e-129 465.3 335 69.3
arahy.Tifrunner.gnm1.ann1.B5R5MF Arachis hypogaea HOM05D004598 ORTHO05D005550 6.8e-129 464.9 337 68.5
Pp3c1_29840 Physcomitrium patens HOM05D004598 ORTHO05D005550 6.3e-127 458.4 416 55.0
Nitab4.5_0001696g0090 Nicotiana tabacum HOM05D004598 ORTHO05D005550 3.5e-125 452.6 404 58.2
arahy.Tifrunner.gnm1.ann1.PEW2A9 Arachis hypogaea HOM05D004598 ORTHO05D005550 7.2e-123 444.9 344 65.7
SMO118G0414 Selaginella moellendorffii HOM05D004598 ORTHO05D005550 1.2e-122 444.1 413 55.2
DCAR_027631 Daucus carota HOM05D004598 ORTHO05D005550 2.7e-117 426.4 312 67.6
SGA_v2.0_scaffold195G40853 Striga asiatica HOM05D004598 ORTHO05D003143 3.3e-115 419.5 323 64.1
Lj2A487T63 Lonicera japonica HOM05D004598 ORTHO05D005550 4.3e-115 419.1 443 53.5
CBR_g41686 Chara braunii HOM05D004598 ORTHO05D005550 1.8e-105 387.1 572 40.0
Migut.H02295 Erythranthe guttata HOM05D004598 ORTHO05D005550 1.7e-100 370.5 333 58.6
vmacro22733 Vaccinium macrocarpon HOM05D004598 ORTHO05D005550 6.6e-100 368.6 418 49.3
C08p43090 Brassica napus HOM05D004598 ORTHO05D005550 2.3e-97 360.1 275 64.7
Gohir.A11G320400 Gossypium hirsutum HOM05D004598 ORTHO05D005550 1.5e-91 340.9 370 50.8
arahy.Tifrunner.gnm1.ann1.BN9D0T Arachis hypogaea HOM05D004598 ORTHO05D005550 4.3e-91 339.3 369 53.1
Migut.H02297 Erythranthe guttata HOM05D004598 ORTHO05D005550 9.6e-91 338.2 272 62.5
unitig_736.g22586 Utricularia gibba HOM05D004598 ORTHO05D005550 2.0e-88 330.5 269 60.6
CSS0036727 Camellia sinensis var. sinensis HOM05D004598 ORTHO05D005550 3.8e-87 326.2 237 67.5
Manes.07G140750 Manihot esculenta HOM05D004598 ORTHO05D005550 1.1e-83 314.7 271 60.1
Thhalv10015361m.g Eutrema salsugineum HOM05D004598 ORTHO05D005550 3.4e-80 303.1 233 63.9
FAN20G2148 Fragaria x ananassa HOM05D004598 ORTHO05D005550 6.4e-79 298.9 437 40.0
ECA240G3480 Erigeron canadensis HOM05D004598 ORTHO05D005550 2.1e-77 293.9 213 64.8
SHI34561 Sapria himalayana HOM05D004598 ORTHO05D005550 3.0e-76 290.0 418 41.9
Lsat_1_v5_gn_9_118221 Lactuca sativa HOM05D004598 ORTHO05D005550 2.1e-74 283.9 427 41.0
Actinidia00342 Actinidia chinensis HOM05D004598 ORTHO05D005550 2.8e-74 283.5 344 48.0
Cre14.g616200 Chlamydomonas reinhardtii HOM05D004598 ORTHO05D005550 7.6e-72 275.4 470 36.8
SGA_v2.0_scaffold108G30913 Striga asiatica HOM05D004598 ORTHO05D005550 4.2e-70 269.6 398 42.0
MD10G1130600 Malus domestica HOM05D004598 ORTHO05D005550 5.1e-68 262.7 234 59.0
Zm00001eb096280 Zea mays HOM05D004598 ORTHO05D005550 8.7e-68 261.9 217 60.8
Nn2g12459 Nelumbo nucifera HOM05D004598 ORTHO05D005550 2.9e-63 246.9 150 78.7
CSS0012948 Camellia sinensis var. sinensis HOM05D004598 ORTHO05D005550 4.2e-62 243.0 152 75.7
Rhsim11G0028900 Rhododendron simsii HOM05D004598 ORTHO05D005550 7.9e-61 238.8 368 40.8
TAR160G0002 Trochodendron aralioides HOM05D004598 ORTHO05D005550 1.0e-60 238.4 181 65.2
MCO01G023 Micromonas commoda HOM05D004598 ORTHO05D005550 6.7e-60 235.7 415 36.9
Psat6g012400 Pisum sativum HOM05D004598 ORTHO05D005550 7.4e-59 232.3 150 75.3
BNapus_Darmor_BZH_scaffold_38p00840 Brassica napus HOM05D004598 ORTHO05D005550 4.1e-57 226.5 146 74.7
FAN24G1674 Fragaria x ananassa HOM05D004598 ORTHO05D005550 1.5e-56 224.6 141 75.2
Cfa027243 Carpinus fangiana HOM05D004598 ORTHO05D005550 2.1e-53 214.2 412 35.2
MD10G1130700 Malus domestica HOM05D004598 ORTHO05D005550 2.6e-48 197.2 134 69.4
BolC9t58552H Brassica oleracea HOM05D004598 ORTHO05D005550 3.4e-48 196.8 259 47.5
Dinv26897 Davidia involucrata HOM05D004598 ORTHO05D005550 1.9e-46 191.0 118 78.0
vmacro01928 Vaccinium macrocarpon HOM05D004598 ORTHO05D005550 2.3e-44 184.1 132 68.9
Lj2E933T1 Lonicera japonica HOM05D004598 ORTHO05D005550 2.0e-43 181.0 111 74.8
MELO3C010621.2 Cucumis melo HOM05D004598 ORTHO05D005550 3.7e-34 150.2 101 75.2
BcaB01g04740 Brassica carinata HOM05D004598 ORTHO05D005550 1.7e-31 141.4 123 65.0
PRCOL_00005536 Prasinoderma coloniale HOM05D004598 ORTHO05D005550 5.5e-30 136.3 426 27.7
vmacro20475 Vaccinium macrocarpon HOM05D004598 ORTHO05D005550 4.7e-29 133.3 92 68.5
vmacro22736 Vaccinium macrocarpon HOM05D004598 ORTHO05D005550 4.7e-29 133.3 92 68.5
Rhsim09G0084000 Rhododendron simsii HOM05D004598 ORTHO05D005550 8.8e-20 102.4 61 78.7
SHI43372 Sapria himalayana HOM05D004598 ORTHO05D005550 3.5e-16 90.5 341 24.9
SHI44717 Sapria himalayana HOM05D004598 ORTHO05D005550 1.2e-11 75.5 65 56.9
CAN.G890.17 Capsicum annuum HOM05D004598 ORTHO05D005550 9.8e-11 72.4 58 58.6
SHI39035 Sapria himalayana HOM05D004598 ORTHO05D005550 6.3e-10 69.7 45 75.6
SHI39037 Sapria himalayana HOM05D004598 ORTHO05D005550 1.8e-09 68.2 60 55.0
SHI53927 Sapria himalayana HOM05D004598 ORTHO05D005550 1.8e-09 68.2 65 50.8
Medtr6g051670 Medicago truncatula HOM05D004598 ORTHO05D005550 2.4e-09 67.8 43 62.8
SHI47796 Sapria himalayana HOM05D004598 ORTHO05D005550 9.2e-09 65.9 45 68.9
SHI53813 Sapria himalayana HOM05D004598 ORTHO05D005550 2.0e-08 64.7 116 36.2


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