Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_6G051330 Cucumis sativus L. HOM05D022667 ORTHO05D009761 8.2e-127 457.2 256 100.0
MELO3C007172.2 Cucumis melo HOM05D022667 ORTHO05D009761 2.9e-116 422.2 265 91.7
ClCG01G024180 Citrullus lanatus HOM05D022667 ORTHO05D009761 5.7e-104 381.3 269 84.8
Sed0006555 Sechium edule HOM05D022667 ORTHO05D009761 2.9e-84 315.8 271 71.6
Sed0023686 Sechium edule HOM05D022667 ORTHO05D009761 2.4e-62 243.0 269 63.2
Glyma.05G164200 Glycine max HOM05D009013 ORTHO05D009761 1.9e-14 84.0 298 30.9
CiPaw.10G096600 Carya illinoinensis HOM05D009013 ORTHO05D009761 2.7e-13 80.1 358 29.3
TWI09G1113 Tripterygium wilfordii HOM05D009852 ORTHO05D009761 4.6e-13 79.3 370 28.6
Ciclev10017480m.g Citrus clementina HOM05D009852 ORTHO05D009761 6.1e-13 79.0 335 29.9
TWI09G0214 Tripterygium wilfordii HOM05D009852 ORTHO05D009761 1.8e-12 77.4 370 28.4
Dinv03635 Davidia involucrata HOM05D009013 ORTHO05D009761 2.3e-12 77.0 373 29.8
AT1G29530 Arabidopsis thaliana HOM05D008719 ORTHO05D010898 3.0e-12 76.6 258 31.4
Lalb_Chr23g0275971 Lupinus albus HOM05D009013 ORTHO05D009761 1.5e-11 74.3 299 29.1
QL05p060720 Quercus lobata HOM05D009013 ORTHO05D009761 1.5e-11 74.3 375 31.5
Phvul.009G214600 Phaseolus vulgaris HOM05D009013 ORTHO05D009761 2.5e-11 73.6 328 29.6
VMungo1309G2255 Vigna mungo HOM05D009013 ORTHO05D009761 5.7e-11 72.4 330 29.1
TWI73G0525 Tripterygium wilfordii HOM05D009852 ORTHO05D009761 9.7e-11 71.6 365 27.7
Lalb_Chr08g0233301 Lupinus albus HOM05D009013 ORTHO05D009761 3.7e-10 69.7 290 33.8
Lalb_Chr12g0204801 Lupinus albus HOM05D009013 ORTHO05D009761 1.4e-09 67.8 331 28.1
SalBow7G2103 Salvia bowleyana HOM05D012266 ORTHO05D011876 1.8e-09 67.4 301 28.9
Glyma.09G085700 Glycine max HOM05D009013 ORTHO05D009761 4.1e-09 66.2 338 27.8
Phvul.002G244200 Phaseolus vulgaris HOM05D009013 ORTHO05D009761 4.5e-08 62.8 299 27.1
Atru.chr10.1414 Acer truncatum HOM05D009852 ORTHO05D009761 5.9e-08 62.4 306 27.1
Glyma.08G121600 Glycine max HOM05D009013 ORTHO05D009761 1.0e-07 61.6 327 27.5
Lj4g0005206 Lotus japonicus HOM05D009013 ORTHO05D009761 1.0e-07 61.6 342 26.3
DCAR_003953 Daucus carota HOM05D009013 ORTHO05D009761 1.3e-07 61.2 373 27.6
Glyma.15G195700 Glycine max HOM05D009013 ORTHO05D009761 1.3e-07 61.2 320 29.1
Dinv32301 Davidia involucrata HOM05D009013 ORTHO05D009761 1.7e-07 60.8 84 52.4
Gorai.010G164100 Gossypium raimondii HOM05D009852 ORTHO05D009761 2.2e-07 60.5 318 28.6
CiPaw.09G129900 Carya illinoinensis HOM05D009013 ORTHO05D009761 3.8e-07 59.7 243 34.2
Haze_05479 Corylus avellana HOM05D009013 ORTHO05D009761 8.5e-07 58.5 364 31.6
BcaB02g09560 Brassica carinata HOM05D008719 ORTHO05D010898 1.1e-06 58.2 278 33.1
SalBow7G0495 Salvia bowleyana HOM05D012266 ORTHO05D011876 1.1e-06 58.2 87 47.1
Gohir.D05G154000 Gossypium hirsutum HOM05D009852 ORTHO05D009761 1.4e-06 57.8 301 28.2
Gohir.D06G140600 Gossypium hirsutum HOM05D009852 ORTHO05D009761 1.4e-06 57.8 318 28.3
Carub.0001s2776 Capsella rubella HOM05D008719 ORTHO05D010898 1.9e-06 57.4 270 29.3
Gorai.009G158300 Gossypium raimondii HOM05D009852 ORTHO05D009761 3.2e-06 56.6 301 28.2
CANSAT35G0309 Cannabis sativa HOM05D009013 ORTHO05D009761 9.4e-06 55.1 311 29.3
CARHR028920 Cardamine hirsuta HOM05D008719 ORTHO05D010898 9.4e-06 55.1 268 28.4


User provided reference genes

Program Settings