Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_6G050530 Cucumis sativus L. HOM05D007416 ORTHO05D009329 3.6e-61 238.0 117 100.0
MELO3C007245.2 Cucumis melo HOM05D007416 ORTHO05D009329 1.3e-58 229.6 117 95.7
ClCG01G023400 Citrullus lanatus HOM05D007416 ORTHO05D009329 1.2e-53 213.0 117 88.9
Sed0002237 Sechium edule HOM05D007416 ORTHO05D009329 6.3e-42 174.1 117 73.5
CiPaw.10G054100 Carya illinoinensis HOM05D007416 ORTHO05D009329 9.2e-33 143.7 116 64.7
Manes.17G051100 Manihot esculenta HOM05D007416 ORTHO05D009329 1.6e-32 142.9 121 58.7
Gohir.D02G032400 Gossypium hirsutum HOM05D007416 ORTHO05D009329 3.5e-32 141.7 105 63.8
Gohir.A02G025200 Gossypium hirsutum HOM05D007416 ORTHO05D009329 1.3e-31 139.8 101 64.4
Gorai.005G035900 Gossypium raimondii HOM05D007416 ORTHO05D009329 1.7e-31 139.4 105 62.9
TWI63G0778 Tripterygium wilfordii HOM05D007416 ORTHO05D009329 1.7e-31 139.4 107 59.8
TWI38G0960 Tripterygium wilfordii HOM05D007416 ORTHO05D009329 2.9e-31 138.7 104 62.5
CANSAT35G0095 Cannabis sativa HOM05D007416 ORTHO05D009329 3.8e-31 138.3 90 72.2
Ciclev10017211m.g Citrus clementina HOM05D007416 ORTHO05D009329 6.6e-31 137.5 98 65.3
Prupe.4G055000 Prunus persica HOM05D007416 ORTHO05D009329 1.1e-30 136.7 111 60.4
Potri.004G051300 Populus trichocarpa HOM05D007416 ORTHO05D009329 1.9e-30 136.0 110 64.5
Cfa000548 Carpinus fangiana HOM05D007416 ORTHO05D009329 3.3e-30 135.2 102 65.7
Haze_06330 Corylus avellana HOM05D007416 ORTHO05D009329 3.3e-30 135.2 99 64.6
TAR627G0809 Trochodendron aralioides HOM05D003433 ORTHO05D003921 5.6e-30 134.4 89 71.9
COL.COLO4_31395 Corchorus olitorius HOM05D007416 ORTHO05D009329 1.2e-29 133.3 98 65.3
Thecc.06G178300 Theobroma cacao HOM05D007416 ORTHO05D009329 2.1e-29 132.5 97 64.9
Eucgr.D00578 Eucalyptus grandis HOM05D007416 ORTHO05D009329 3.6e-29 131.7 85 65.9
Dinv17369 Davidia involucrata HOM05D007416 ORTHO05D009329 1.8e-28 129.4 97 63.9
MD10G1286700 Malus domestica HOM05D007416 ORTHO05D009329 1.8e-28 129.4 100 62.0
Nitab4.5_0014582g0020 Nicotiana tabacum HOM05D007416 ORTHO05D009329 1.8e-28 129.4 105 61.0
Sc17g0005840 Simmondsia chinensis HOM05D007416 ORTHO05D009329 2.3e-28 129.0 92 65.2
Nitab4.5_0002114g0110 Nicotiana tabacum HOM05D007416 ORTHO05D009329 3.0e-28 128.6 105 63.8
PGSC0003DMG400022819 Solanum tuberosum HOM05D007416 ORTHO05D009329 3.0e-28 128.6 111 59.5
CAN.G361.15 Capsicum annuum HOM05D007416 ORTHO05D009329 5.2e-28 127.9 114 59.6
Aqoxy1G02242 Aquilegia oxysepala HOM05D007416 ORTHO05D009329 6.8e-28 127.5 117 55.6
Cpa.g.sc7.10 Carica papaya HOM05D007416 ORTHO05D009329 6.8e-28 127.5 76 72.4
THA.LOC104812624 Tarenaya hassleriana HOM05D007416 ORTHO05D009329 6.8e-28 127.5 102 59.8
unitig_8.g4633 Utricularia gibba HOM05D007416 ORTHO05D009329 1.5e-27 126.3 116 59.5
unitig_8.g4637 Utricularia gibba HOM05D007416 ORTHO05D009329 1.5e-27 126.3 116 59.5
PGR004G2353 Punica granatum HOM05D007416 ORTHO05D009329 2.0e-27 125.9 85 67.1
BcaB03g12097 Brassica carinata HOM05D007416 ORTHO05D009329 3.4e-27 125.2 101 61.4
Migut.M01088 Erythranthe guttata HOM05D007416 ORTHO05D009329 3.4e-27 125.2 111 60.4
Lsat_1_v5_gn_1_119080 Lactuca sativa HOM05D007416 ORTHO05D009329 3.4e-27 125.2 108 55.6
Nn1g06362 Nelumbo nucifera HOM05D007416 ORTHO05D009329 3.4e-27 125.2 103 58.3
unitig_8.g4657 Utricularia gibba HOM05D004204 ORTHO05D005069 4.4e-27 124.8 116 58.6
BcaC01g00068 Brassica carinata HOM05D007416 ORTHO05D009329 9.8e-27 123.6 93 63.4
AUR62031108 Chenopodium quinoa HOM05D007416 ORTHO05D009329 9.8e-27 123.6 126 53.2
Solyc10g008850.2 Solanum lycopersicum HOM05D007416 ORTHO05D009329 1.3e-26 123.2 79 70.9
Sopen10g004640 Solanum pennellii HOM05D007416 ORTHO05D009329 1.3e-26 123.2 79 70.9
A08p25450 Brassica napus HOM05D007416 ORTHO05D009329 1.7e-26 122.9 88 64.8
BraA07t28904Z Brassica rapa HOM05D007416 ORTHO05D009329 1.7e-26 122.9 105 60.0
CDE05G1837 Ceratophyllum demersum HOM05D007416 ORTHO05D009329 1.7e-26 122.9 66 78.8
QL05p043606 Quercus lobata HOM05D007416 ORTHO05D009329 1.7e-26 122.9 100 58.0
Peaxi162Scf00248g00011 Petunia axillaris HOM05D007416 ORTHO05D009329 2.2e-26 122.5 113 60.2
SGA_v2.0_scaffold309G48156 Striga asiatica HOM05D007416 ORTHO05D009329 2.2e-26 122.5 112 57.1
Hma1.2p1_1465F.1_g285370 Hydrangea macrophylla HOM05D007416 ORTHO05D009329 2.9e-26 122.1 97 59.8
SGA_v2.0_scaffold16G07657 Striga asiatica HOM05D007416 ORTHO05D009329 2.9e-26 122.1 107 59.8
BolC3t19794H Brassica oleracea HOM05D007416 ORTHO05D009329 3.7e-26 121.7 89 64.0
Thhalv10009143m.g Eutrema salsugineum HOM05D007416 ORTHO05D009329 3.7e-26 121.7 91 61.5
C03p75360 Brassica napus HOM05D007416 ORTHO05D009329 4.9e-26 121.3 91 62.6
BraA08t34496Z Brassica rapa HOM05D007416 ORTHO05D009329 4.9e-26 121.3 86 65.1
HanXRQChr14g0454031 Helianthus annuus HOM05D007416 ORTHO05D009329 4.9e-26 121.3 94 60.6
RcHm_v2.0_Chr5g0009671 Rosa chinensis HOM05D007416 ORTHO05D009329 4.9e-26 121.3 97 61.9
SalBow8G2036 Salvia bowleyana HOM05D007416 ORTHO05D009329 4.9e-26 121.3 97 63.9
CSS0002821 Camellia sinensis var. sinensis HOM05D007416 ORTHO05D009329 6.4e-26 120.9 80 67.5
CARHR028020 Cardamine hirsuta HOM05D007416 ORTHO05D009329 8.3e-26 120.6 100 60.0
C07p16790 Brassica napus HOM05D007416 ORTHO05D009329 1.1e-25 120.2 98 62.2
FAN16G3750 Fragaria x ananassa HOM05D007416 ORTHO05D009329 1.9e-25 119.4 95 62.1
AUR62014900 Chenopodium quinoa HOM05D007416 ORTHO05D009329 3.2e-25 118.6 126 51.6
ECA234G4626 Erigeron canadensis HOM05D007416 ORTHO05D009329 3.2e-25 118.6 117 54.7
Sp1g24790 Schrenkiella parvula HOM05D007416 ORTHO05D009329 3.2e-25 118.6 93 61.3
Oeu012170.1 Olea europaea HOM05D007416 ORTHO05D009329 5.4e-25 117.9 70 74.3
arahy.Tifrunner.gnm1.ann1.46W2M6 Arachis hypogaea HOM05D007416 ORTHO05D009329 7.0e-25 117.5 102 57.8
arahy.Tifrunner.gnm1.ann1.96U62E Arachis hypogaea HOM05D007416 ORTHO05D009329 7.0e-25 117.5 104 54.8
Cc02_g14200 Coffea canephora HOM05D007416 ORTHO05D009329 9.2e-25 117.1 109 56.0
Carub.0001s2700 Capsella rubella HOM05D007416 ORTHO05D009329 1.2e-24 116.7 89 61.8
PSO675G1239 Papaver somniferum HOM05D007416 ORTHO05D009329 1.2e-24 116.7 87 63.2
Ah.09g237760 Amaranthus hybridus HOM05D007416 ORTHO05D009329 2.0e-24 115.9 103 57.3
AL1G42170 Arabidopsis lyrata HOM05D007416 ORTHO05D009329 3.5e-24 115.2 100 58.0
FvH4_3g08330 Fragaria vesca HOM05D007416 ORTHO05D009329 3.5e-24 115.2 107 56.1
Phvul.006G180100 Phaseolus vulgaris HOM05D007416 ORTHO05D009329 3.5e-24 115.2 114 57.0
Atru.chr10.1755 Acer truncatum HOM05D007416 ORTHO05D009329 4.6e-24 114.8 117 48.7
FAN21G3844 Fragaria x ananassa HOM05D007416 ORTHO05D009329 4.6e-24 114.8 115 53.9
AT1G28540 Arabidopsis thaliana HOM05D007416 ORTHO05D009329 6.0e-24 114.4 85 64.7
HPP92_005210 Vanilla planifolia HOM05D007416 ORTHO05D009329 1.7e-23 112.8 97 56.7
FAN25G0684 Fragaria x ananassa HOM05D007416 ORTHO05D009329 2.3e-23 112.5 61 80.3
TPR.G11747 Trifolium pratense HOM05D007416 ORTHO05D009329 2.3e-23 112.5 113 53.1
TPR.G39540 Trifolium pratense HOM05D007416 ORTHO05D009329 3.9e-23 111.7 113 53.1
VMungo0540G0454 Vigna mungo HOM05D007416 ORTHO05D009329 5.0e-23 111.3 68 75.0
Os06g0524500 Oryza sativa ssp. japonica HOM05D007416 ORTHO05D009329 6.6e-23 110.9 62 72.6
Lalb_Chr20g0121431 Lupinus albus HOM05D007416 ORTHO05D009329 8.6e-23 110.5 109 53.2
BolC7t42186H Brassica oleracea HOM05D007416 ORTHO05D009329 1.1e-22 110.2 98 60.2
EL10Ac8g20461 Beta vulgaris HOM05D007416 ORTHO05D009329 1.9e-22 109.4 80 61.2
Os06g0525000 Oryza sativa ssp. japonica HOM05D007416 ORTHO05D009329 3.3e-22 108.6 78 62.8
Medtr2g014970 Medicago truncatula HOM05D007416 ORTHO05D009329 7.3e-22 107.5 106 51.9
Psat1g201280 Pisum sativum HOM05D007416 ORTHO05D009329 7.3e-22 107.5 105 52.4
Glyma.13G152576 Glycine max HOM05D007416 ORTHO05D009329 9.5e-22 107.1 95 61.1
Lj6g0009243 Lotus japonicus HOM05D007416 ORTHO05D009329 2.1e-21 105.9 57 78.9
Aa31LG6G11050 Aethionema arabicum HOM05D007416 ORTHO05D009329 4.7e-21 104.8 58 75.9
Ca_00403_v3 Cicer arietinum L. HOM05D007416 ORTHO05D009329 4.7e-21 104.8 95 55.8
Mapoly0016s0097 Marchantia polymorpha HOM05D007416 ORTHO05D009329 1.1e-20 103.6 71 64.8
FAN11G0205 Fragaria x ananassa HOM05D007416 ORTHO05D009329 2.3e-20 102.4 85 58.8
Actinidia07614 Actinidia chinensis HOM05D007416 ORTHO05D009329 4.0e-20 101.7 97 50.5
Rhsim02G0137800 Rhododendron simsii HOM05D007416 ORTHO05D009329 5.2e-20 101.3 128 44.5
HPP92_008637 Vanilla planifolia HOM05D007416 ORTHO05D009329 8.9e-20 100.5 95 52.6
AUR62031107 Chenopodium quinoa HOM05D007416 ORTHO05D009329 1.4e-17 93.2 86 51.2
A07p11140 Brassica napus HOM05D007416 ORTHO05D009329 3.5e-16 88.6 71 62.0
Pp3c24_10110 Physcomitrium patens HOM05D007416 ORTHO05D009329 2.5e-14 82.4 76 47.4
AagrBONN_evm.TU.Sc2ySwM_362.2610 Anthoceros agrestis HOM05D007416 ORTHO05D009329 1.1e-12 77.0 57 56.1
Zm00001eb194760 Zea mays HOM05D007416 ORTHO05D009329 9.5e-06 53.9 66 40.9


User provided reference genes

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