Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_6G049710 Cucumis sativus L. HOM05D000164 ORTHO05D174755 4.7e-42 174.1 87 100.0
MELO3C007324.2 Cucumis melo HOM05D000164 ORTHO05D000096 3.2e-14 81.6 71 60.6
Manes.17G033300 Manihot esculenta HOM05D000164 ORTHO05D000096 4.0e-09 64.7 77 46.8
THA.LOC104809544 Tarenaya hassleriana HOM05D000164 ORTHO05D000096 5.3e-09 64.3 70 50.0
Lalb_Chr09g0327281 Lupinus albus HOM05D000164 ORTHO05D000096 2.6e-08 62.0 66 53.0
Aa31LG1G3490 Aethionema arabicum HOM05D000164 ORTHO05D000096 7.6e-08 60.5 39 71.8
Manes.16G020100 Manihot esculenta HOM05D000164 ORTHO05D000096 7.6e-08 60.5 77 44.2
COL.COLO4_31592 Corchorus olitorius HOM05D000164 ORTHO05D000096 9.9e-08 60.1 39 76.9
MELO3C007325.2 Cucumis melo HOM05D000164 ORTHO05D000096 9.9e-08 60.1 39 69.2
Lalb_Chr05g0218141 Lupinus albus HOM05D000164 ORTHO05D000096 9.9e-08 60.1 39 74.4
Thhalv10024986m.g Eutrema salsugineum HOM05D000164 ORTHO05D000096 1.3e-07 59.7 39 74.4
Eucgr.D00720 Eucalyptus grandis HOM05D000164 ORTHO05D000096 2.2e-07 58.9 71 47.9
Carub.0007s1996 Capsella rubella HOM05D000164 ORTHO05D000096 3.8e-07 58.2 39 71.8
CsaV3_6G049700 Cucumis sativus L. HOM05D000164 ORTHO05D000096 3.8e-07 58.2 39 66.7
Duzib235G0141 Durio zibethinus HOM05D000164 ORTHO05D000096 3.8e-07 58.2 70 50.0
Lj4g0002741 Lotus japonicus HOM05D000164 ORTHO05D000096 3.8e-07 58.2 39 71.8
arahy.Tifrunner.gnm1.ann1.8TG862 Arachis hypogaea HOM05D000164 ORTHO05D000096 4.9e-07 57.8 77 46.8
arahy.Tifrunner.gnm1.ann1.YZD8WZ Arachis hypogaea HOM05D000164 ORTHO05D000096 4.9e-07 57.8 77 46.8
Glyma.08G059700 Glycine max HOM05D000164 ORTHO05D000096 4.9e-07 57.8 39 71.8
Gorai.010G149800 Gossypium raimondii HOM05D000164 ORTHO05D000096 4.9e-07 57.8 39 74.4
Sed0008483 Sechium edule HOM05D000164 ORTHO05D000096 4.9e-07 57.8 39 66.7
Duzib160G0256 Durio zibethinus HOM05D000164 ORTHO05D000096 8.4e-07 57.0 39 71.8
Medtr4g091370 Medicago truncatula HOM05D000164 ORTHO05D000096 8.4e-07 57.0 62 51.6
Potri.004G033600 Populus trichocarpa HOM05D000164 ORTHO05D000096 8.4e-07 57.0 77 44.2
Sed0027245 Sechium edule HOM05D000164 ORTHO05D000096 8.4e-07 57.0 58 51.7
CiPaw.10G118500 Carya illinoinensis HOM05D000164 ORTHO05D000096 1.1e-06 56.6 68 50.0
Medtr4g090600 Medicago truncatula HOM05D000164 ORTHO05D000096 1.1e-06 56.6 39 71.8
Sabra11G0028900 Salix brachista HOM05D000164 ORTHO05D000096 1.1e-06 56.6 53 56.6
AT4G21480 Arabidopsis thaliana HOM05D000164 ORTHO05D000096 1.4e-06 56.2 39 71.8
CANSAT11G2226 Cannabis sativa HOM05D000164 ORTHO05D000096 1.4e-06 56.2 66 48.5
CARHR228150 Cardamine hirsuta HOM05D000164 ORTHO05D000096 1.4e-06 56.2 39 74.4
Psat7g110000 Pisum sativum HOM05D000164 ORTHO05D000096 1.4e-06 56.2 39 71.8
Sc24g0000700 Simmondsia chinensis HOM05D000164 ORTHO05D000096 1.4e-06 56.2 63 50.8
VMungo0251G3779 Vigna mungo HOM05D000164 ORTHO05D000096 1.4e-06 56.2 39 71.8
AL7G32590 Arabidopsis lyrata HOM05D000164 ORTHO05D000096 1.9e-06 55.8 39 69.2
A09p64490 Brassica napus HOM05D000164 ORTHO05D000096 1.9e-06 55.8 74 41.9
Gohir.A06G113300 Gossypium hirsutum HOM05D000164 ORTHO05D000096 1.9e-06 55.8 39 71.8
Gohir.D06G128200 Gossypium hirsutum HOM05D000164 ORTHO05D000096 1.9e-06 55.8 39 71.8
Psat7g108280 Pisum sativum HOM05D000164 ORTHO05D000096 1.9e-06 55.8 30 83.3
Sp7g19600 Schrenkiella parvula HOM05D000164 ORTHO05D000096 1.9e-06 55.8 39 69.2
BcaB08g37387 Brassica carinata HOM05D000164 ORTHO05D000096 2.4e-06 55.5 73 41.1
C08p48290 Brassica napus HOM05D000164 ORTHO05D000096 2.4e-06 55.5 73 41.1
BolC8t52368H Brassica oleracea HOM05D000164 ORTHO05D000096 2.4e-06 55.5 73 41.1
Carub.0001s1089 Capsella rubella HOM05D000164 ORTHO05D000096 2.4e-06 55.5 73 41.1
Cpa.g.c35494 Carica papaya HOM05D000164 ORTHO05D000096 2.4e-06 55.5 39 66.7
Psat3g161240 Pisum sativum HOM05D000164 ORTHO05D000096 2.4e-06 55.5 72 44.4
TAR629G1393 Trochodendron aralioides HOM05D000164 ORTHO05D000096 2.4e-06 55.5 66 48.5
BcaC09g51217 Brassica carinata HOM05D000164 ORTHO05D000096 3.2e-06 55.1 39 71.8
A01p12800 Brassica napus HOM05D000164 ORTHO05D000096 3.2e-06 55.1 39 71.8
C01p15400 Brassica napus HOM05D000164 ORTHO05D000096 3.2e-06 55.1 39 71.8
BolC1t01494H Brassica oleracea HOM05D000164 ORTHO05D000096 3.2e-06 55.1 39 71.8
BraA01t01223Z Brassica rapa HOM05D000164 ORTHO05D000096 3.2e-06 55.1 39 71.8
CANSAT56G2368 Cannabis sativa HOM05D000164 ORTHO05D000096 3.2e-06 55.1 66 50.0
Gorai.009G174100 Gossypium raimondii HOM05D000164 ORTHO05D000096 3.2e-06 55.1 61 49.2
Solyc03g006650.2 Solanum lycopersicum HOM05D000164 ORTHO05D000096 3.2e-06 55.1 72 45.8
Sopen03g002660 Solanum pennellii HOM05D000164 ORTHO05D000096 3.2e-06 55.1 72 45.8
TWI14G0640 Tripterygium wilfordii HOM05D000164 ORTHO05D000096 3.2e-06 55.1 39 64.1
Aa31LG6G3490 Aethionema arabicum HOM05D000164 ORTHO05D000096 4.2e-06 54.7 39 66.7
AL1G22290 Arabidopsis lyrata HOM05D000164 ORTHO05D000096 5.4e-06 54.3 73 41.1
BcaC05g24988 Brassica carinata HOM05D000164 ORTHO05D000096 5.4e-06 54.3 73 41.1
C05p09530 Brassica napus HOM05D000164 ORTHO05D000096 5.4e-06 54.3 73 41.1
BolC5t29695H Brassica oleracea HOM05D000164 ORTHO05D000096 5.4e-06 54.3 73 41.1
CARHR011500 Cardamine hirsuta HOM05D000164 ORTHO05D000096 5.4e-06 54.3 35 71.4
Thhalv10007974m.g Eutrema salsugineum HOM05D000164 ORTHO05D000096 5.4e-06 54.3 73 41.1
Gohir.D05G168900 Gossypium hirsutum HOM05D000164 ORTHO05D000096 5.4e-06 54.3 67 46.3
Phvul.002G221200 Phaseolus vulgaris HOM05D000164 ORTHO05D000096 5.4e-06 54.3 39 69.2
Potri.011G042100 Populus trichocarpa HOM05D000164 ORTHO05D000096 5.4e-06 54.3 30 76.7
QL05p081122 Quercus lobata HOM05D000164 ORTHO05D000096 5.4e-06 54.3 39 66.7
QL05p081190 Quercus lobata HOM05D000164 ORTHO05D000096 5.4e-06 54.3 39 64.1
Sp1g09930 Schrenkiella parvula HOM05D000164 ORTHO05D000096 5.4e-06 54.3 73 41.1
AT1G11260 Arabidopsis thaliana HOM05D000164 ORTHO05D000096 7.1e-06 53.9 73 41.1
BcaC05g25002 Brassica carinata HOM05D000164 ORTHO05D000096 7.1e-06 53.9 35 68.6
A06p07920 Brassica napus HOM05D000164 ORTHO05D000096 7.1e-06 53.9 73 41.1
BraA06t23992Z Brassica rapa HOM05D000164 ORTHO05D000096 7.1e-06 53.9 73 41.1
BraA09t41798Z Brassica rapa HOM05D000164 ORTHO05D000096 7.1e-06 53.9 67 43.3
Ca_18495_v3 Cicer arietinum L. HOM05D000164 ORTHO05D000096 7.1e-06 53.9 39 64.1
Lalb_Chr16g0383381 Lupinus albus HOM05D000164 ORTHO05D000096 7.1e-06 53.9 35 68.6
Atru.chr10.2019 Acer truncatum HOM05D000164 ORTHO05D000096 9.3e-06 53.5 39 69.2
Glyma.07G189500 Glycine max HOM05D000164 ORTHO05D000096 9.3e-06 53.5 39 69.2


User provided reference genes

Program Settings