Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_6G048910 Cucumis sativus L. HOM05D006957 ORTHO05D008647 1.3e-154 549.7 275 100.0
MELO3C007402.2 Cucumis melo HOM05D006957 ORTHO05D008647 1.2e-147 526.6 275 96.4
ClCG01G021850 Citrullus lanatus HOM05D006957 ORTHO05D008647 1.8e-140 502.7 275 93.1
Sed0022215 Sechium edule HOM05D006957 ORTHO05D008647 1.5e-134 483.0 275 88.7
Dinv13912 Davidia involucrata HOM05D006957 ORTHO05D008647 2.6e-102 375.9 279 70.3
QL05p072698 Quercus lobata HOM05D006957 ORTHO05D008647 1.3e-101 373.6 280 70.0
TWI38G1647 Tripterygium wilfordii HOM05D006957 ORTHO05D008647 1.3e-101 373.6 282 71.6
RcHm_v2.0_Chr5g0077361 Rosa chinensis HOM05D006957 ORTHO05D008647 1.8e-100 369.8 281 70.8
Atru.chr10.2253 Acer truncatum HOM05D006957 ORTHO05D008647 4.6e-99 365.2 283 70.3
Prupe.6G022000 Prunus persica HOM05D006957 ORTHO05D008647 4.6e-99 365.2 284 71.8
CANSAT56G0113 Cannabis sativa HOM05D006957 ORTHO05D008647 1.9e-97 359.8 285 70.9
CSS0002589 Camellia sinensis var. sinensis HOM05D006957 ORTHO05D008647 2.5e-97 359.4 275 68.4
Lj1A1232T100 Lonicera japonica HOM05D006957 ORTHO05D008647 3.3e-97 359.0 281 68.0
GSVIVG01012704001 Vitis vinifera HOM05D006957 ORTHO05D008647 1.2e-96 357.1 243 75.3
FvH4_3g43300 Fragaria vesca HOM05D006957 ORTHO05D008647 1.6e-96 356.7 281 69.0
FAN25G2833 Fragaria x ananassa HOM05D006957 ORTHO05D008647 2.8e-96 355.9 296 66.6
Cfa000203 Carpinus fangiana HOM05D006957 ORTHO05D008647 1.0e-95 354.0 279 68.5
COL.COLO4_31796 Corchorus olitorius HOM05D006957 ORTHO05D008647 2.3e-95 352.8 275 68.4
Ciclev10016210m.g Citrus clementina HOM05D006957 ORTHO05D008647 3.1e-95 352.4 279 69.2
Glyma.07G262000 Glycine max HOM05D006957 ORTHO05D008647 3.1e-95 352.4 279 67.0
Potri.011G006700 Populus trichocarpa HOM05D006957 ORTHO05D008647 4.0e-95 352.1 280 67.5
FAN16G3059 Fragaria x ananassa HOM05D006957 ORTHO05D008647 5.2e-95 351.7 289 67.1
FAN21G2957 Fragaria x ananassa HOM05D006957 ORTHO05D008647 1.5e-94 350.1 296 66.2
VMungo1215G0309 Vigna mungo HOM05D006957 ORTHO05D008647 2.0e-94 349.7 279 65.6
Glyma.17G012100 Glycine max HOM05D006957 ORTHO05D008647 3.4e-94 349.0 280 66.1
Gohir.A06G149100 Gossypium hirsutum HOM05D006957 ORTHO05D008647 4.4e-94 348.6 232 76.7
Gohir.D06G155200 Gossypium hirsutum HOM05D006957 ORTHO05D008647 5.8e-94 348.2 232 75.9
vmacro15796 Vaccinium macrocarpon HOM05D006957 ORTHO05D008647 7.5e-94 347.8 278 67.3
FAN11G3374 Fragaria x ananassa HOM05D006957 ORTHO05D008647 1.7e-93 346.7 296 65.5
HanXRQChr16g0515501 Helianthus annuus HOM05D006957 ORTHO05D008647 2.9e-93 345.9 276 65.9
Manes.17G025800 Manihot esculenta HOM05D006957 ORTHO05D008647 2.9e-93 345.9 259 71.0
Migut.M01335 Erythranthe guttata HOM05D006957 ORTHO05D008647 6.4e-93 344.7 279 65.2
ECA234G3681 Erigeron canadensis HOM05D006957 ORTHO05D008647 8.3e-93 344.4 243 70.8
arahy.Tifrunner.gnm1.ann1.SK97UM Arachis hypogaea HOM05D006957 ORTHO05D008647 1.4e-92 343.6 282 65.2
CAN.G1014.10 Capsicum annuum HOM05D006957 ORTHO05D008647 2.4e-92 342.8 276 64.9
Lj4g0000977 Lotus japonicus HOM05D006957 ORTHO05D008647 2.4e-92 342.8 283 65.0
arahy.Tifrunner.gnm1.ann1.VHEB9D Arachis hypogaea HOM05D006957 ORTHO05D008647 3.2e-92 342.4 282 64.9
Phvul.003G080300 Phaseolus vulgaris HOM05D006957 ORTHO05D008647 3.2e-92 342.4 279 65.2
Thecc.06G223400 Theobroma cacao HOM05D006957 ORTHO05D008647 3.2e-92 342.4 276 67.4
Medtr4g132350 Medicago truncatula HOM05D006957 ORTHO05D008647 5.4e-92 341.7 280 64.3
Solyc02g080780.3 Solanum lycopersicum HOM05D006957 ORTHO05D008647 5.4e-92 341.7 281 64.1
Sopen02g025470 Solanum pennellii HOM05D006957 ORTHO05D008647 9.2e-92 340.9 281 63.7
MD11G1027900 Malus domestica HOM05D006957 ORTHO05D008647 2.0e-91 339.7 283 66.1
Lalb_Chr07g0177131 Lupinus albus HOM05D006957 ORTHO05D008647 2.7e-91 339.3 291 63.6
Lsat_1_v5_gn_4_59280 Lactuca sativa HOM05D006957 ORTHO05D008647 3.5e-91 339.0 245 71.0
DCAR_028192 Daucus carota HOM05D006957 ORTHO05D008647 6.0e-91 338.2 271 68.3
TAR629G0592 Trochodendron aralioides HOM05D006957 ORTHO05D008647 6.0e-91 338.2 270 67.4
Psat4g006040 Pisum sativum HOM05D006957 ORTHO05D008647 3.0e-90 335.9 276 64.5
Eucgr.E03906 Eucalyptus grandis HOM05D006957 ORTHO05D008647 3.9e-90 335.5 282 67.0
Aqoxy4G01856 Aquilegia oxysepala HOM05D006957 ORTHO05D008647 8.6e-90 334.3 281 64.1
AUR62012727 Chenopodium quinoa HOM05D006957 ORTHO05D008647 8.6e-90 334.3 288 63.2
Eucgr.L02772 Eucalyptus grandis HOM05D006957 ORTHO05D008647 8.6e-90 334.3 282 66.0
TPR.G29296 Trifolium pratense HOM05D006957 ORTHO05D008647 1.1e-89 334.0 283 63.3
Haze_06820 Corylus avellana HOM05D006957 ORTHO05D008647 1.9e-89 333.2 305 61.6
PGR042G2408 Punica granatum HOM05D006957 ORTHO05D008647 1.9e-89 333.2 201 81.6
MBI18_g04903_MAGBIO Magnolia biondii HOM05D006957 ORTHO05D008647 2.5e-89 332.8 254 69.7
AUR62021927 Chenopodium quinoa HOM05D006957 ORTHO05D008647 3.3e-89 332.4 284 63.7
Nitab4.5_0007963g0030 Nicotiana tabacum HOM05D006957 ORTHO05D008647 3.3e-89 332.4 281 63.7
Cc09_g01500 Coffea canephora HOM05D006957 ORTHO05D008647 4.3e-89 332.0 278 64.7
Gorai.010G181400 Gossypium raimondii HOM05D006957 ORTHO05D008647 4.3e-89 332.0 223 75.8
MSTRG.7198 Avicennia marina HOM05D006957 ORTHO05D008647 5.6e-89 331.6 289 63.0
SalBow8G2851 Salvia bowleyana HOM05D006957 ORTHO05D008647 7.3e-89 331.3 241 69.7
Nitab4.5_0002695g0060 Nicotiana tabacum HOM05D006957 ORTHO05D008647 2.8e-88 329.3 237 70.5
Rhsim02G0105900 Rhododendron simsii HOM05D006957 ORTHO05D008647 3.6e-88 328.9 274 65.7
EL10Ac8g20084 Beta vulgaris HOM05D006957 ORTHO05D008647 2.3e-87 326.2 282 62.8
Duzib160G0853 Durio zibethinus HOM05D006957 ORTHO05D008647 4.0e-87 325.5 277 66.1
PGSC0003DMG400016446 Solanum tuberosum HOM05D006957 ORTHO05D008647 5.2e-87 325.1 271 63.8
Peaxi162Scf00178g01715 Petunia axillaris HOM05D006957 ORTHO05D008647 1.2e-86 323.9 245 68.6
QL02p099916 Quercus lobata HOM05D006957 ORTHO05D008647 1.2e-86 323.9 183 83.6
THA.LOC104818712 Tarenaya hassleriana HOM05D006957 ORTHO05D008647 1.5e-86 323.6 281 62.6
Actinidia11860 Actinidia chinensis HOM05D006957 ORTHO05D008647 1.7e-85 320.1 279 64.2
PSO832G3220 Papaver somniferum HOM05D006957 ORTHO05D008647 2.2e-85 319.7 199 78.9
SGA_v2.0_scaffold4G01906 Striga asiatica HOM05D006957 ORTHO05D008647 3.7e-85 318.9 248 66.5
Sabra04G0005100 Salix brachista HOM05D006957 ORTHO05D008647 8.3e-85 317.8 187 82.4
AL2G13680 Arabidopsis lyrata HOM05D006957 ORTHO05D008647 4.1e-84 315.5 201 76.6
Ca_21073_v3 Cicer arietinum L. HOM05D006957 ORTHO05D008647 4.1e-84 315.5 182 83.0
Thhalv10023639m.g Eutrema salsugineum HOM05D006957 ORTHO05D008647 1.6e-83 313.5 201 75.6
BcaC06g31885 Brassica carinata HOM05D006957 ORTHO05D008647 3.5e-83 312.4 284 62.7
Hund21421 Selenicereus undatus HOM05D006957 ORTHO05D008647 4.6e-83 312.0 293 59.7
Duzib192G0359 Durio zibethinus HOM05D006957 ORTHO05D008647 7.8e-83 311.2 198 77.3
BcaC02g10501 Brassica carinata HOM05D006957 ORTHO05D008647 1.0e-82 310.8 284 62.0
C04p28180 Brassica napus HOM05D006957 ORTHO05D008647 1.0e-82 310.8 284 62.0
BolC4t24361H Brassica oleracea HOM05D006957 ORTHO05D008647 1.0e-82 310.8 284 62.0
unitig_748.g7953 Utricularia gibba HOM05D006957 ORTHO05D008647 1.3e-82 310.5 209 71.8
Carub.0002s0276 Capsella rubella HOM05D006957 ORTHO05D008647 2.3e-82 309.7 197 77.7
Os03g0744700 Oryza sativa ssp. japonica HOM05D006957 ORTHO05D008647 5.1e-82 308.5 188 75.5
BolC4t24891H Brassica oleracea HOM05D006957 ORTHO05D008647 1.5e-81 307.0 275 61.8
AT1G62250 Arabidopsis thaliana HOM05D006957 ORTHO05D008647 1.9e-81 306.6 276 61.6
ATR0794G153 Amborella trichopoda HOM05D006957 ORTHO05D008647 4.3e-81 305.4 180 81.1
Sp2g02390 Schrenkiella parvula HOM05D006957 ORTHO05D008647 9.5e-81 304.3 279 59.9
Zm00001eb056950 Zea mays HOM05D006957 ORTHO05D008647 1.2e-80 303.9 207 71.0
Nn1g07184 Nelumbo nucifera HOM05D006957 ORTHO05D008647 5.8e-78 295.0 208 71.6
Ah.09g234750 Amaranthus hybridus HOM05D006957 ORTHO05D008647 2.9e-77 292.7 263 60.8
CiPaw.09G093600 Carya illinoinensis HOM05D006957 ORTHO05D008647 3.5e-75 285.8 230 65.7
CDE05G2181 Ceratophyllum demersum HOM05D006957 ORTHO05D008647 2.3e-74 283.1 202 67.8
BcaC02g10063 Brassica carinata HOM05D006957 ORTHO05D008647 4.7e-72 275.4 166 78.3
A03p67500 Brassica napus HOM05D006957 ORTHO05D008647 4.0e-71 272.3 274 58.4
BraA01t02718Z Brassica rapa HOM05D006957 ORTHO05D008647 6.8e-71 271.6 274 58.4
Mapoly0071s0090 Marchantia polymorpha HOM05D006957 ORTHO05D008647 5.1e-66 255.4 185 64.9
Sc05g0009300 Simmondsia chinensis HOM05D006957 ORTHO05D008647 5.3e-63 245.4 241 54.8
Pp3c10_11430 Physcomitrium patens HOM05D006957 ORTHO05D008647 2.0e-62 243.4 234 53.4
CiPaw.10G072800 Carya illinoinensis HOM05D006957 ORTHO05D008647 2.7e-51 206.5 121 81.0
SMO347G0662 Selaginella moellendorffii HOM05D006957 ORTHO05D008647 3.0e-50 203.0 178 57.3
C04p33270 Brassica napus HOM05D006957 ORTHO05D008647 2.5e-49 199.9 216 53.7
Oeu051204.1 Olea europaea HOM05D006957 ORTHO05D008647 1.3e-45 187.6 103 81.6
arahy.Tifrunner.gnm1.ann1.EAEB6D Arachis hypogaea HOM05D006957 ORTHO05D008647 3.7e-32 142.9 85 80.0
TAR627G0415 Trochodendron aralioides HOM05D006957 ORTHO05D008647 1.9e-28 130.6 81 76.5
Dinv20064 Davidia involucrata HOM05D006957 ORTHO05D008647 7.4e-25 118.6 135 49.6
SEGI_02842 Sequoiadendron giganteum HOM05D006957 ORTHO05D008647 1.8e-23 114.0 84 63.1
CiPaw.10G072900 Carya illinoinensis HOM05D006957 ORTHO05D008647 3.2e-20 103.2 99 57.6
Cre02.g141850 Chlamydomonas reinhardtii HOM05D006957 ORTHO05D008647 4.8e-16 89.4 195 32.3
AagrBONN_evm.TU.Sc2ySwM_228.4491 Anthoceros agrestis HOM05D006957 ORTHO05D008647 4.2e-12 76.3 85 43.5
PRCOL_00005158 Prasinoderma coloniale HOM05D006957 ORTHO05D008647 2.1e-11 73.9 212 30.2
Cpa.g.sc1199.4 Carica papaya HOM05D006957 ORTHO05D008647 1.3e-08 64.7 35 88.6
Nn1g08227 Nelumbo nucifera HOM05D006957 ORTHO05D008647 7.7e-06 55.5 48 58.3


User provided reference genes

Program Settings