Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_6G048500 Cucumis sativus L. HOM05D007192 ORTHO05D009034 7.4e-102 374.0 209 100.0
MELO3C007436.2 Cucumis melo HOM05D007192 ORTHO05D009034 4.5e-91 338.2 209 87.6
ClCG01G021480 Citrullus lanatus HOM05D007192 ORTHO05D009034 1.3e-82 310.1 213 81.7
Sed0016386 Sechium edule HOM05D007192 ORTHO05D009034 2.7e-67 259.2 209 71.8
Thecc.06G233600 Theobroma cacao HOM05D007192 ORTHO05D009034 8.9e-55 217.6 214 65.9
Atru.chr1.2446 Acer truncatum HOM05D007192 ORTHO05D009034 9.9e-54 214.2 213 65.3
TWI38G0802 Tripterygium wilfordii HOM05D007192 ORTHO05D009034 1.7e-53 213.4 181 70.2
GSVIVG01003334001 Vitis vinifera HOM05D007192 ORTHO05D009034 8.3e-53 211.1 216 63.4
CANSAT56G2005 Cannabis sativa HOM05D007192 ORTHO05D009034 2.4e-52 209.5 217 62.2
Prupe.4G010200 Prunus persica HOM05D007192 ORTHO05D009034 4.1e-52 208.8 211 64.5
Hma1.2p1_0657F.1_g197140 Hydrangea macrophylla HOM05D007192 ORTHO05D009034 7.1e-52 208.0 214 57.9
PGR042G3283 Punica granatum HOM05D007192 ORTHO05D009034 6.0e-51 204.9 212 58.0
Dinv13967 Davidia involucrata HOM05D001152 ORTHO05D000967 7.8e-51 204.5 208 59.1
MD05G1358000 Malus domestica HOM05D007192 ORTHO05D009034 1.0e-50 204.1 214 62.6
MD10G1331900 Malus domestica HOM05D007192 ORTHO05D009034 1.7e-50 203.4 209 62.7
Glyma.07G265300 Glycine max HOM05D007192 ORTHO05D009034 6.6e-50 201.4 211 60.2
TAR629G2173 Trochodendron aralioides HOM05D007192 ORTHO05D009034 1.5e-49 200.3 215 59.1
Oeu016820.1 Olea europaea HOM05D007192 ORTHO05D009034 1.9e-49 199.9 223 54.3
QL05p069683 Quercus lobata HOM05D007192 ORTHO05D009034 3.3e-49 199.1 213 63.4
Sabra06G0008700 Salix brachista HOM05D007192 ORTHO05D009034 1.2e-48 197.2 173 70.5
Haze_08662 Corylus avellana HOM05D007192 ORTHO05D009034 2.8e-48 196.1 213 60.1
Gohir.D06G216300 Gossypium hirsutum HOM05D007192 ORTHO05D009034 2.8e-48 196.1 177 68.4
Gorai.010G249900 Gossypium raimondii HOM05D007192 ORTHO05D009034 2.8e-48 196.1 177 68.4
Gohir.A06G205200 Gossypium hirsutum HOM05D007192 ORTHO05D009034 3.6e-48 195.7 177 68.4
Dinv07405 Davidia involucrata HOM05D007192 ORTHO05D009034 8.1e-48 194.5 217 55.8
Nn1g07392 Nelumbo nucifera HOM05D007192 ORTHO05D009034 1.4e-47 193.7 220 58.6
Potri.016G013500 Populus trichocarpa HOM05D007192 ORTHO05D009034 3.1e-47 192.6 175 66.9
Phvul.003G083700 Phaseolus vulgaris HOM05D007192 ORTHO05D009034 4.0e-47 192.2 213 57.3
Duzib235G0907 Durio zibethinus HOM05D007192 ORTHO05D009034 5.2e-47 191.8 220 60.0
Ciclev10016735m.g Citrus clementina HOM05D007192 ORTHO05D009034 6.8e-47 191.4 170 71.8
Eucgr.E03926 Eucalyptus grandis HOM05D007192 ORTHO05D009034 8.9e-47 191.0 176 68.2
RcHm_v2.0_Chr5g0001481 Rosa chinensis HOM05D007192 ORTHO05D009034 8.9e-47 191.0 215 58.6
Glyma.17G008700 Glycine max HOM05D007192 ORTHO05D009034 1.2e-46 190.7 212 58.5
CiPaw.09G102500 Carya illinoinensis HOM05D007192 ORTHO05D009034 2.6e-46 189.5 215 55.8
FvH4_3g00960 Fragaria vesca HOM05D007192 ORTHO05D009034 9.9e-46 187.6 187 61.5
Hma1.2p1_0657F.1_g197150 Hydrangea macrophylla HOM05D007192 ORTHO05D009034 1.9e-44 183.3 270 46.3
Lj4g0002454 Lotus japonicus HOM05D007192 ORTHO05D009034 3.2e-44 182.6 173 64.7
Nitab4.5_0000143g0180 Nicotiana tabacum HOM05D007192 ORTHO05D009034 7.1e-44 181.4 218 54.6
Ah.14g087620 Amaranthus hybridus HOM05D007192 ORTHO05D009034 9.2e-44 181.0 181 61.3
THA.LOC104799643 Tarenaya hassleriana HOM05D007192 ORTHO05D009034 1.6e-43 180.3 185 64.3
Aqoxy2G00603 Aquilegia oxysepala HOM05D007192 ORTHO05D009034 8.7e-42 174.5 221 52.9
arahy.Tifrunner.gnm1.ann1.E8J80R Arachis hypogaea HOM05D007192 ORTHO05D009034 2.5e-41 172.9 212 57.1
PSO541G1889 Papaver somniferum HOM05D007192 ORTHO05D009034 1.3e-40 170.6 222 56.3
PGSC0003DMG400013349 Solanum tuberosum HOM05D007192 ORTHO05D009034 2.1e-40 169.9 170 58.2
Solyc11g012280.2 Solanum lycopersicum HOM05D007192 ORTHO05D009034 2.8e-40 169.5 170 58.8
TPR.G37116 Trifolium pratense HOM05D007192 ORTHO05D009034 2.8e-40 169.5 174 58.6
Nitab4.5_0011595g0010 Nicotiana tabacum HOM05D007192 ORTHO05D009034 4.8e-40 168.7 215 50.7
PSO675G6515 Papaver somniferum HOM05D007192 ORTHO05D009034 4.8e-40 168.7 222 55.9
Sopen11g007060 Solanum pennellii HOM05D007192 ORTHO05D009034 6.2e-40 168.3 170 58.2
Peaxi162Scf00352g00210 Petunia axillaris HOM05D007192 ORTHO05D009034 1.4e-39 167.2 216 50.5
SalBow8G5140 Salvia bowleyana HOM05D007192 ORTHO05D009034 1.4e-39 167.2 185 54.1
CDE08G0359 Ceratophyllum demersum HOM05D007192 ORTHO05D009034 6.9e-39 164.9 218 51.4
Sc24g0000280 Simmondsia chinensis HOM05D007192 ORTHO05D009034 1.2e-38 164.1 157 67.5
DCAR_004888 Daucus carota HOM05D007192 ORTHO05D009034 7.6e-38 161.4 213 54.5
Medtr4g133070 Medicago truncatula HOM05D007192 ORTHO05D009034 7.6e-38 161.4 190 56.3
CDE06G1445 Ceratophyllum demersum HOM05D007060 ORTHO05D009087 9.9e-38 161.0 171 57.9
Cfa000100 Carpinus fangiana HOM05D007192 ORTHO05D009034 1.7e-37 160.2 150 70.7
Cc09_g00850 Coffea canephora HOM05D007192 ORTHO05D009034 1.7e-37 160.2 216 52.8
MSTRG.14611 Avicennia marina HOM05D007192 ORTHO05D009034 3.8e-37 159.1 171 55.6
CARHR192700 Cardamine hirsuta HOM05D007192 ORTHO05D009034 6.4e-37 158.3 192 56.8
Thhalv10014703m.g Eutrema salsugineum HOM05D007192 ORTHO05D009034 5.4e-36 155.2 194 57.2
Hund23406 Selenicereus undatus HOM05D007192 ORTHO05D009034 5.4e-36 155.2 211 53.1
Sp6g24270 Schrenkiella parvula HOM05D007192 ORTHO05D009034 7.1e-36 154.8 166 62.0
BNapus_Darmor_BZH_scaffold_38p01780 Brassica napus HOM05D007192 ORTHO05D009034 2.1e-35 153.3 193 54.4
BraA02t05557Z Brassica rapa HOM05D007192 ORTHO05D009034 2.1e-35 153.3 193 54.4
FAN21G0227 Fragaria x ananassa HOM05D007192 ORTHO05D009034 2.7e-35 152.9 151 63.6
Carub.0006s1851 Capsella rubella HOM05D007192 ORTHO05D009034 4.6e-35 152.1 195 55.9
Manes.09G076800 Manihot esculenta HOM05D007192 ORTHO05D009034 6.0e-35 151.8 148 66.9
Rhsim02G0145900 Rhododendron simsii HOM05D007192 ORTHO05D009034 6.0e-35 151.8 190 51.1
Lalb_Chr07g0176981 Lupinus albus HOM05D007192 ORTHO05D009034 7.8e-35 151.4 186 52.7
VMungo1215G1962 Vigna mungo HOM05D007192 ORTHO05D009034 1.0e-34 151.0 148 64.9
BcaC03g13735 Brassica carinata HOM05D007192 ORTHO05D009034 3.0e-34 149.4 192 55.7
BolC2t07017H Brassica oleracea HOM05D007192 ORTHO05D009034 3.0e-34 149.4 192 55.7
BcaB05g22869 Brassica carinata HOM05D007192 ORTHO05D009034 5.1e-34 148.7 176 56.8
Duzib192G0317 Durio zibethinus HOM05D007192 ORTHO05D009034 1.5e-33 147.1 155 57.4
Actinidia26860 Actinidia chinensis HOM05D007192 ORTHO05D009034 1.9e-33 146.7 166 60.2
AL6G31680 Arabidopsis lyrata HOM05D007192 ORTHO05D009034 1.3e-32 144.1 176 56.2
AT5G20130 Arabidopsis thaliana HOM05D007192 ORTHO05D009034 1.3e-32 144.1 180 56.1
C03p11420 Brassica napus HOM05D007192 ORTHO05D009034 1.3e-32 144.1 176 57.4
CAN.G1186.41 Capsicum annuum HOM05D007192 ORTHO05D009034 3.6e-32 142.5 151 57.6
HPP92_000005 Vanilla planifolia HOM05D007192 ORTHO05D009034 1.4e-31 140.6 171 50.3
unitig_37.g12189 Utricularia gibba HOM05D007192 ORTHO05D009034 3.1e-31 139.4 209 43.5
Lsat_1_v5_gn_0_23500 Lactuca sativa HOM05D007192 ORTHO05D009034 5.3e-31 138.7 211 46.9
HanXRQChr10g0285171 Helianthus annuus HOM05D007192 ORTHO05D009034 6.9e-31 138.3 201 44.8
ATR0776G058 Amborella trichopoda HOM05D007192 ORTHO05D009034 9.0e-31 137.9 208 51.0
Aa31LG2G11450 Aethionema arabicum HOM05D007192 ORTHO05D009034 3.4e-30 136.0 149 60.4
A03p09840 Brassica napus HOM05D007192 ORTHO05D009034 3.8e-29 132.5 180 53.9
BraA03t10299Z Brassica rapa HOM05D007192 ORTHO05D009034 3.8e-29 132.5 180 53.9
Psat4g005120 Pisum sativum HOM05D007192 ORTHO05D009034 1.1e-28 131.0 143 58.0
Potri.006G010600 Populus trichocarpa HOM05D007192 ORTHO05D009034 5.1e-26 122.1 126 65.9
vmacro03641 Vaccinium macrocarpon HOM05D007192 ORTHO05D009034 1.1e-25 120.9 157 48.4
ECA248G2945 Erigeron canadensis HOM05D007192 ORTHO05D009034 9.6e-25 117.9 195 45.1
FAN25G1082 Fragaria x ananassa HOM05D007192 ORTHO05D009034 1.6e-24 117.1 125 63.2
EL10Ac8g20192 Beta vulgaris HOM05D007192 ORTHO05D009034 3.7e-24 115.9 129 61.2
Migut.M01397 Erythranthe guttata HOM05D007192 ORTHO05D009034 3.1e-23 112.8 140 56.4
Lj2A261T34 Lonicera japonica HOM05D007192 ORTHO05D009034 1.0e-21 107.8 160 51.2
SGA_v2.0_scaffold4G01874 Striga asiatica HOM05D007192 ORTHO05D009034 1.9e-20 103.6 137 52.6
BcaB01g04801 Brassica carinata HOM05D007192 ORTHO05D009034 5.5e-20 102.1 185 39.5
COL.COLO4_31887 Corchorus olitorius HOM05D007192 ORTHO05D009034 3.9e-18 95.9 214 34.6
SEGI_14587 Sequoiadendron giganteum HOM05D007192 ORTHO05D009034 4.3e-17 92.4 175 40.6
BcaB01g04802 Brassica carinata HOM05D007192 ORTHO05D009034 4.8e-16 89.0 98 53.1
SEGI_15910 Sequoiadendron giganteum HOM05D007192 ORTHO05D009034 1.1e-15 87.8 148 44.6
BolC3t13616H Brassica oleracea HOM05D007192 ORTHO05D009034 2.4e-15 86.7 182 36.3
AUR62021857 Chenopodium quinoa HOM05D007192 ORTHO05D009034 2.9e-13 79.7 199 32.7
Pp3c14_17130 Physcomitrium patens HOM05D007192 ORTHO05D009034 9.3e-12 74.7 182 40.7
AagrBONN_evm.TU.Sc2ySwM_362.1438 Anthoceros agrestis HOM05D007192 ORTHO05D009034 1.3e-10 70.9 185 38.9
Mapoly0007s0283 Marchantia polymorpha HOM05D007192 ORTHO05D009034 8.2e-08 61.6 159 41.5
Mapoly0252s0005 Marchantia polymorpha HOM05D007192 ORTHO05D009034 8.2e-08 61.6 159 41.5
GSVIVG01003341001 Vitis vinifera HOM05D007192 ORTHO05D009034 7.7e-06 55.1 67 50.7


User provided reference genes

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