Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_6G047030 Cucumis sativus L. HOM05D007514 ORTHO05D009469 3.9e-92 341.7 197 100.0
MELO3C007896.2 Cucumis melo HOM05D007514 ORTHO05D009469 2.1e-74 282.7 182 92.3
ClCG01G020240 Citrullus lanatus HOM05D007514 ORTHO05D009469 2.0e-64 249.6 182 83.5
Sed0026037 Sechium edule HOM05D007514 ORTHO05D009469 2.6e-40 169.5 180 54.4
Cpa.g.sc6.242 Carica papaya HOM05D007514 ORTHO05D009469 1.6e-34 150.2 183 47.5
CiPaw.07G058000 Carya illinoinensis HOM05D007514 ORTHO05D009469 4.1e-33 145.6 184 52.2
Ciclev10026620m.g Citrus clementina HOM05D007514 ORTHO05D009469 1.5e-32 143.7 183 49.2
MD02G1133200 Malus domestica HOM05D007514 ORTHO05D009469 2.0e-32 143.3 189 49.2
Haze_03771 Corylus avellana HOM05D007514 ORTHO05D009469 4.5e-32 142.1 180 61.7
Potri.005G115000 Populus trichocarpa HOM05D007514 ORTHO05D009469 4.5e-32 142.1 180 48.9
QL06p032616 Quercus lobata HOM05D007514 ORTHO05D009469 5.9e-32 141.7 183 55.2
PGR119G2084 Punica granatum HOM05D007514 ORTHO05D009469 3.8e-31 139.0 182 50.5
THA.LOC104819752 Tarenaya hassleriana HOM05D007514 ORTHO05D009469 1.4e-30 137.1 172 46.5
Manes.02G103801 Manihot esculenta HOM05D007514 ORTHO05D009469 3.2e-30 136.0 180 47.2
Sc16g0002120 Simmondsia chinensis HOM05D007514 ORTHO05D009469 4.2e-30 135.6 162 47.5
TWI09G1362 Tripterygium wilfordii HOM05D007514 ORTHO05D009469 5.5e-30 135.2 183 45.4
Duzib264G0291 Durio zibethinus HOM05D007514 ORTHO05D009469 3.6e-29 132.5 95 69.5
Gohir.A02G170200 Gossypium hirsutum HOM05D007514 ORTHO05D009469 3.6e-29 132.5 192 48.4
Gohir.D03G009800 Gossypium hirsutum HOM05D007514 ORTHO05D009469 6.1e-29 131.7 188 46.3
Thecc.01G019700 Theobroma cacao HOM05D007514 ORTHO05D009469 1.0e-28 131.0 98 65.3
Cfa006967 Carpinus fangiana HOM05D007514 ORTHO05D009469 2.3e-28 129.8 177 59.9
Oeu059507.1 Olea europaea HOM05D007514 ORTHO05D009469 2.3e-28 129.8 72 81.9
Sabra05G0094100 Salix brachista HOM05D007514 ORTHO05D009469 3.0e-28 129.4 98 66.3
Prupe.7G167500 Prunus persica HOM05D007514 ORTHO05D009469 6.7e-28 128.3 99 63.6
Ah.01g021120 Amaranthus hybridus HOM05D007514 ORTHO05D009469 8.8e-28 127.9 71 80.3
AUR62011597 Chenopodium quinoa HOM05D007514 ORTHO05D009469 8.8e-28 127.9 69 82.6
Gorai.003G010100 Gossypium raimondii HOM05D007514 ORTHO05D009469 8.8e-28 127.9 193 46.1
SGA_v2.0_scaffold234G43648 Striga asiatica HOM05D007514 ORTHO05D009469 8.8e-28 127.9 71 81.7
COL.COLO4_21918 Corchorus olitorius HOM05D007514 ORTHO05D009469 1.5e-27 127.1 98 66.3
MSTRG.883 Avicennia marina HOM05D007514 ORTHO05D009469 2.0e-27 126.7 133 52.6
EL10Ac9g21968 Beta vulgaris HOM05D007514 ORTHO05D009469 2.5e-27 126.3 71 81.7
Cc07_g10640 Coffea canephora HOM05D007514 ORTHO05D009469 2.5e-27 126.3 92 67.4
VMungo0251G0111 Vigna mungo HOM05D007514 ORTHO05D009469 2.5e-27 126.3 194 43.3
Aa31LG8G15140 Aethionema arabicum HOM05D007514 ORTHO05D009469 3.3e-27 125.9 170 44.1
Hma1.2p1_0743F.1_g211610 Hydrangea macrophylla HOM05D007514 ORTHO05D009469 3.3e-27 125.9 75 77.3
Lj4g0013490 Lotus japonicus HOM05D007514 ORTHO05D009469 3.3e-27 125.9 96 63.5
arahy.Tifrunner.gnm1.ann1.EYR4CZ Arachis hypogaea HOM05D007514 ORTHO05D009469 7.4e-27 124.8 77 75.3
arahy.Tifrunner.gnm1.ann1.JXSY0Y Arachis hypogaea HOM05D007514 ORTHO05D009469 7.4e-27 124.8 77 75.3
unitig_26.g10012 Utricularia gibba HOM05D007514 ORTHO05D009469 7.4e-27 124.8 95 66.3
Aqoxy5G01772 Aquilegia oxysepala HOM05D007514 ORTHO05D009469 9.7e-27 124.4 179 40.8
Sp3g31390 Schrenkiella parvula HOM05D007514 ORTHO05D009469 1.3e-26 124.0 96 62.5
Os06g0715200 Oryza sativa ssp. japonica HOM05D007514 ORTHO05D009469 1.7e-26 123.6 73 75.3
Migut.L00252 Erythranthe guttata HOM05D007514 ORTHO05D009469 2.2e-26 123.2 79 72.2
Migut.L00394 Erythranthe guttata HOM05D007514 ORTHO05D009469 2.2e-26 123.2 79 72.2
Lalb_Chr05g0229901 Lupinus albus HOM05D007514 ORTHO05D009469 2.2e-26 123.2 97 64.9
Peaxi162Scf00083g00065 Petunia axillaris HOM05D007514 ORTHO05D009469 2.8e-26 122.9 82 69.5
Thhalv10022884m.g Eutrema salsugineum HOM05D007514 ORTHO05D009469 6.3e-26 121.7 188 39.4
Phvul.003G262200 Phaseolus vulgaris HOM05D007514 ORTHO05D009469 6.3e-26 121.7 94 64.9
CARHR108460 Cardamine hirsuta HOM05D007514 ORTHO05D009469 8.2e-26 121.3 174 41.4
Rhsim08G0034000 Rhododendron simsii HOM05D007514 ORTHO05D009469 8.2e-26 121.3 98 58.2
Atru.chr3.793 Acer truncatum HOM05D007514 ORTHO05D009469 1.1e-25 120.9 94 62.8
AL3G51000 Arabidopsis lyrata HOM05D007514 ORTHO05D009469 1.1e-25 120.9 176 39.8
CSS0010041 Camellia sinensis var. sinensis HOM05D007514 ORTHO05D009469 1.1e-25 120.9 84 67.9
CSS0030936 Camellia sinensis var. sinensis HOM05D007514 ORTHO05D009469 1.1e-25 120.9 84 67.9
CANSAT01G2848 Cannabis sativa HOM05D007514 ORTHO05D009469 1.1e-25 120.9 95 65.3
Nn6g32368 Nelumbo nucifera HOM05D007514 ORTHO05D009469 1.4e-25 120.6 155 46.5
FAN23G2896 Fragaria x ananassa HOM05D007514 ORTHO05D009469 1.8e-25 120.2 71 73.2
FAN26G2491 Fragaria x ananassa HOM05D007514 ORTHO05D009469 1.8e-25 120.2 71 73.2
AT2G17972 Arabidopsis thaliana HOM05D007514 ORTHO05D009469 2.4e-25 119.8 96 59.4
BcaC06g36349 Brassica carinata HOM05D007514 ORTHO05D009469 2.4e-25 119.8 97 59.8
C07p05010 Brassica napus HOM05D007514 ORTHO05D009469 2.4e-25 119.8 97 59.8
BolC7t40902H Brassica oleracea HOM05D007514 ORTHO05D009469 2.4e-25 119.8 97 59.8
DCAR_016611 Daucus carota HOM05D007514 ORTHO05D009469 2.4e-25 119.8 71 74.6
Lsat_1_v5_gn_3_74241 Lactuca sativa HOM05D007514 ORTHO05D009469 2.4e-25 119.8 70 74.3
TPR.G30050 Trifolium pratense HOM05D007514 ORTHO05D009469 2.4e-25 119.8 98 62.2
Zm00001eb228020 Zea mays HOM05D007514 ORTHO05D009469 2.4e-25 119.8 69 75.4
FvH4_1g11940 Fragaria vesca HOM05D007514 ORTHO05D009469 3.1e-25 119.4 182 50.0
FAN19G0235 Fragaria x ananassa HOM05D007514 ORTHO05D009469 3.1e-25 119.4 182 50.0
Glyma.16G128900 Glycine max HOM05D007514 ORTHO05D009469 3.1e-25 119.4 68 79.4
A07p02710 Brassica napus HOM05D007514 ORTHO05D009469 4.1e-25 119.0 97 58.8
BraA07t28071Z Brassica rapa HOM05D007514 ORTHO05D009469 4.1e-25 119.0 97 58.8
Ca_22373_v3 Cicer arietinum L. HOM05D007514 ORTHO05D009469 9.1e-25 117.9 95 62.1
Carub.0003s3210 Capsella rubella HOM05D007514 ORTHO05D009469 1.2e-24 117.5 176 39.2
Psat4g099040 Pisum sativum HOM05D007514 ORTHO05D009469 1.2e-24 117.5 96 62.5
Dinv33625 Davidia involucrata HOM05D007514 ORTHO05D009469 1.5e-24 117.1 75 69.3
BcaB03g16581 Brassica carinata HOM05D007514 ORTHO05D009469 2.0e-24 116.7 97 57.7
Nitab4.5_0001959g0010 Nicotiana tabacum HOM05D007514 ORTHO05D009469 2.0e-24 116.7 83 68.7
Nitab4.5_0006286g0070 Nicotiana tabacum HOM05D007514 ORTHO05D009469 2.0e-24 116.7 83 68.7
Glyma.02G048800 Glycine max HOM05D007514 ORTHO05D009469 2.6e-24 116.3 84 67.9
Medtr8g075960 Medicago truncatula HOM05D007514 ORTHO05D009469 2.6e-24 116.3 97 60.8
MBI05_g15346_MAGBIO Magnolia biondii HOM05D007514 ORTHO05D009469 3.4e-24 115.9 96 57.3
HPP92_025365 Vanilla planifolia HOM05D007514 ORTHO05D009469 3.4e-24 115.9 67 73.1
Sopen02g028770 Solanum pennellii HOM05D007514 ORTHO05D009469 4.5e-24 115.5 71 73.2
PGSC0003DMG401003636 Solanum tuberosum HOM05D007514 ORTHO05D009469 4.5e-24 115.5 71 73.2
Lj2P467T19 Lonicera japonica HOM05D007514 ORTHO05D009469 5.9e-24 115.2 95 56.8
TAR365G0263 Trochodendron aralioides HOM05D007514 ORTHO05D009469 1.1e-22 110.9 161 46.6
PSO541G1849 Papaver somniferum HOM05D007514 ORTHO05D009469 4.2e-22 109.0 170 41.8
SMO353G0320 Selaginella moellendorffii HOM05D007514 ORTHO05D009469 5.5e-22 108.6 97 53.6
TAR365G1204 Trochodendron aralioides HOM05D007514 ORTHO05D009469 5.5e-22 108.6 161 46.0
PSO675G8043 Papaver somniferum HOM05D007514 ORTHO05D009469 3.6e-21 105.9 66 69.7
arahy.Tifrunner.gnm1.ann1.KXHU4R Arachis hypogaea HOM05D007514 ORTHO05D009469 7.9e-21 104.8 70 71.4
Duzib147G0981 Durio zibethinus HOM05D007514 ORTHO05D009469 2.0e-19 100.1 183 39.3
AagrBONN_evm.TU.Sc2ySwM_344.4071 Anthoceros agrestis HOM05D007514 ORTHO05D009469 4.4e-19 99.0 98 50.0
Pp3c15_14110 Physcomitrium patens HOM05D007514 ORTHO05D009469 4.4e-19 99.0 97 52.6
CAN.G66.6 Capsicum annuum HOM05D007514 ORTHO05D009469 2.2e-18 96.7 69 68.1
Mapoly0011s0103 Marchantia polymorpha HOM05D007514 ORTHO05D009469 6.3e-18 95.1 63 66.7
SEGI_16775 Sequoiadendron giganteum HOM05D007514 ORTHO05D009469 1.1e-17 94.4 92 53.3
FAN28G1094 Fragaria x ananassa HOM05D007514 ORTHO05D009469 1.0e-15 87.8 79 58.2
Cre05.g245102 Chlamydomonas reinhardtii HOM05D007514 ORTHO05D009469 3.6e-13 79.3 66 53.0


User provided reference genes

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