Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_6G046680 Cucumis sativus L. HOM05D006531 ORTHO05D007905 0.0e+00 1142.9 557 100.0
MELO3C007866.2 Cucumis melo HOM05D006531 ORTHO05D007905 0.0e+00 1091.6 557 95.0
ClCG01G019940 Citrullus lanatus HOM05D006531 ORTHO05D008656 2.0e-295 1018.5 589 85.1
Sed0004808 Sechium edule HOM05D006531 ORTHO05D007905 5.1e-198 694.9 395 86.1
QL06p035210 Quercus lobata HOM05D006531 ORTHO05D007905 5.3e-171 605.1 597 53.6
Haze_03846 Corylus avellana HOM05D006531 ORTHO05D007905 2.0e-170 603.2 573 54.6
MD15G1254500 Malus domestica HOM05D006531 ORTHO05D007905 1.7e-169 600.1 563 56.5
CANSAT21G1927 Cannabis sativa HOM05D006531 ORTHO05D007905 2.6e-162 576.2 558 52.5
Gohir.D11G188400 Gossypium hirsutum HOM05D006531 ORTHO05D007905 5.0e-161 572.0 564 53.0
Atru.chr3.665 Acer truncatum HOM05D006531 ORTHO05D007905 1.9e-160 570.1 583 52.5
GSVIVG01018883001 Vitis vinifera HOM05D006531 ORTHO05D007905 7.2e-160 568.2 558 53.4
Gorai.007G200500 Gossypium raimondii HOM05D006531 ORTHO05D007905 2.7e-159 566.2 564 52.8
Thecc.01G028000 Theobroma cacao HOM05D006531 ORTHO05D007905 1.4e-158 563.9 569 52.4
Dinv05610 Davidia involucrata HOM05D006531 ORTHO05D007905 3.0e-158 562.8 557 53.0
Actinidia35619 Actinidia chinensis HOM05D006531 ORTHO05D007905 8.8e-158 561.2 585 50.4
TAR628G0973 Trochodendron aralioides HOM05D006531 ORTHO05D007905 7.4e-157 558.1 603 48.1
RcHm_v2.0_Chr2g0100811 Rosa chinensis HOM05D006531 ORTHO05D007905 1.3e-156 557.4 563 52.6
FAN19G3073 Fragaria x ananassa HOM05D006531 ORTHO05D007905 1.7e-156 557.0 571 51.0
Prupe.7G159100 Prunus persica HOM05D006531 ORTHO05D007905 1.4e-155 553.9 516 54.1
Duzib187G1823 Durio zibethinus HOM05D006531 ORTHO05D007905 3.1e-155 552.7 562 52.7
FAN23G2909 Fragaria x ananassa HOM05D006531 ORTHO05D007905 5.3e-155 552.0 569 50.4
FvH4_1g12740 Fragaria vesca HOM05D006531 ORTHO05D007905 9.1e-155 551.2 575 50.6
COL.COLO4_22012 Corchorus olitorius HOM05D006531 ORTHO05D007905 2.9e-153 546.2 564 52.5
FAN26G0669 Fragaria x ananassa HOM05D006531 ORTHO05D007905 5.5e-152 542.0 570 49.8
Cpa.g.sc89.75 Carica papaya HOM05D006531 ORTHO05D007905 5.1e-150 535.4 577 48.4
Ciclev10025250m.g Citrus clementina HOM05D006531 ORTHO05D007905 1.1e-149 534.3 583 49.7
FAN28G0612 Fragaria x ananassa HOM05D006531 ORTHO05D007905 2.2e-148 530.0 571 48.7
Potri.007G019733 Populus trichocarpa HOM05D006531 ORTHO05D007905 1.8e-147 526.9 583 49.2
Gohir.D11G322533 Gossypium hirsutum HOM05D006531 ORTHO05D007905 1.7e-145 520.4 561 50.6
Potri.007G019800 Populus trichocarpa HOM05D006531 ORTHO05D007905 1.7e-145 520.4 584 48.5
PSO675G3692 Papaver somniferum HOM05D006531 ORTHO05D007905 5.5e-144 515.4 588 46.9
Atru.BG.101.p Acer truncatum HOM05D006531 ORTHO05D007905 6.7e-142 508.4 555 49.7
TWI53G1729 Tripterygium wilfordii HOM05D006531 ORTHO05D007905 1.5e-141 507.3 566 47.9
Glyma.02G053000 Glycine max HOM05D006531 ORTHO05D007905 2.6e-141 506.5 576 47.6
vmacro17801 Vaccinium macrocarpon HOM05D006531 ORTHO05D007905 2.2e-140 503.4 602 46.0
Lalb_Chr16g0391021 Lupinus albus HOM05D006531 ORTHO05D007905 2.8e-140 503.1 575 46.8
PSO541G5850 Papaver somniferum HOM05D006531 ORTHO05D007905 4.1e-139 499.2 584 46.7
Rhsim08G0121800 Rhododendron simsii HOM05D006531 ORTHO05D007905 1.6e-138 497.3 545 49.7
PGR102G2490 Punica granatum HOM05D006531 ORTHO05D007905 2.9e-137 493.0 567 46.7
VMungo0251G0240 Vigna mungo HOM05D006531 ORTHO05D007905 5.2e-134 482.3 572 44.8
Aqoxy6G01185 Aquilegia oxysepala HOM05D006531 ORTHO05D007905 6.8e-134 481.9 608 42.9
Ca_22340_v3 Cicer arietinum L. HOM05D006531 ORTHO05D007905 1.2e-133 481.1 583 46.1
Medtr8g076860 Medicago truncatula HOM05D006531 ORTHO05D007905 7.5e-133 478.4 574 45.8
arahy.Tifrunner.gnm1.ann1.P54VLQ Arachis hypogaea HOM05D006531 ORTHO05D007905 1.3e-132 477.6 579 47.5
arahy.Tifrunner.gnm1.ann1.WDDE23 Arachis hypogaea HOM05D006531 ORTHO05D007905 4.8e-132 475.7 579 47.7
Psat4g096120 Pisum sativum HOM05D006531 ORTHO05D007905 4.1e-131 472.6 576 44.6
Hund14004 Selenicereus undatus HOM05D006531 ORTHO05D007905 9.1e-131 471.5 555 45.2
DCAR_001553 Daucus carota HOM05D006531 ORTHO05D007905 3.5e-130 469.5 562 46.1
TPR.G21544 Trifolium pratense HOM05D006531 ORTHO05D007905 4.5e-130 469.2 576 45.7
EL10As8g23896 Beta vulgaris HOM05D006531 ORTHO05D007905 5.9e-130 468.8 563 46.0
MSTRG.23258 Avicennia marina HOM05D006531 ORTHO05D007905 1.7e-129 467.2 579 45.6
Migut.H02514 Erythranthe guttata HOM05D006531 ORTHO05D007905 5.5e-128 462.2 559 45.8
AUR62004101 Chenopodium quinoa HOM05D006531 ORTHO05D007905 2.1e-127 460.3 562 44.8
Ah.03g141200 Amaranthus hybridus HOM05D006531 ORTHO05D007905 1.4e-126 457.6 569 44.6
Lj4g0004916 Lotus japonicus HOM05D006531 ORTHO05D007905 1.4e-126 457.6 578 45.0
Sabra07G0016900 Salix brachista HOM05D006531 ORTHO05D007905 1.8e-126 457.2 529 47.3
AUR62007614 Chenopodium quinoa HOM05D006531 ORTHO05D007905 4.0e-126 456.1 560 45.0
Sc07g0000880 Simmondsia chinensis HOM05D006531 ORTHO05D007905 8.8e-126 454.9 552 45.5
Oeu056763.1 Olea europaea HOM05D006531 ORTHO05D007905 2.6e-125 453.4 580 47.1
Cc07_g10020 Coffea canephora HOM05D006531 ORTHO05D007905 4.4e-125 452.6 582 44.5
Eucgr.J02379 Eucalyptus grandis HOM05D006531 ORTHO05D007905 3.7e-124 449.5 574 43.4
Thhalv10003992m.g Eutrema salsugineum HOM05D006531 ORTHO05D007905 1.6e-122 444.1 564 43.6
CARHR147820 Cardamine hirsuta HOM05D006531 ORTHO05D007905 1.0e-121 441.4 564 43.4
THA.LOC104819768 Tarenaya hassleriana HOM05D006531 ORTHO05D007905 3.8e-121 439.5 568 43.3
AL5G15610 Arabidopsis lyrata HOM05D006531 ORTHO05D007905 1.5e-120 437.6 564 45.0
SalBow8G4669 Salvia bowleyana HOM05D006531 ORTHO05D007905 1.5e-120 437.6 564 44.1
AT3G26750 Arabidopsis thaliana HOM05D006531 ORTHO05D007905 4.3e-120 436.0 555 43.8
Lsat_1_v5_gn_4_151921 Lactuca sativa HOM05D006531 ORTHO05D007905 9.5e-120 434.9 565 43.0
Sp2g15880 Schrenkiella parvula HOM05D006531 ORTHO05D007905 2.8e-119 433.3 567 44.6
Aa31LG2G5790 Aethionema arabicum HOM05D006531 ORTHO05D007905 1.2e-117 427.9 547 44.4
BcaC06g33892 Brassica carinata HOM05D006531 ORTHO05D007905 1.5e-117 427.6 560 43.0
C07p35780 Brassica napus HOM05D006531 ORTHO05D007905 3.4e-117 426.4 554 43.1
A06p41760 Brassica napus HOM05D006531 ORTHO05D007905 1.7e-116 424.1 562 43.4
BolC7t44097H Brassica oleracea HOM05D006531 ORTHO05D007905 1.7e-116 424.1 554 43.0
BraA06t27096Z Brassica rapa HOM05D006531 ORTHO05D007905 1.7e-116 424.1 562 43.4
BcaC06g31044 Brassica carinata HOM05D006531 ORTHO05D007905 2.9e-116 423.3 552 42.8
CDE04G2389 Ceratophyllum demersum HOM05D006531 ORTHO05D007905 4.6e-114 416.0 594 38.7
Lj2C458T7 Lonicera japonica HOM05D006531 ORTHO05D007905 3.0e-113 413.3 435 50.8
Nitab4.5_0011360g0010 Nicotiana tabacum HOM05D006531 ORTHO05D007905 7.3e-112 408.7 575 41.0
CiPaw.07G051400 Carya illinoinensis HOM05D006531 ORTHO05D007905 1.2e-111 407.9 420 50.7
ECA232G0312 Erigeron canadensis HOM05D006531 ORTHO05D007905 6.2e-111 405.6 553 42.0
CAN.G753.1 Capsicum annuum HOM05D006531 ORTHO05D007905 1.0e-110 404.8 555 42.2
PGSC0003DMG400022568 Solanum tuberosum HOM05D006531 ORTHO05D007905 2.3e-110 403.7 555 41.8
HanXRQChr09g0261281 Helianthus annuus HOM05D006531 ORTHO05D007905 2.6e-109 400.2 550 42.4
Sopen03g006510 Solanum pennellii HOM05D006531 ORTHO05D007905 2.6e-109 400.2 550 41.3
Solyc03g033720.4 Solanum lycopersicum HOM05D006531 ORTHO05D007905 6.4e-108 395.6 552 41.3
Nitab4.5_0001289g0010 Nicotiana tabacum HOM05D006531 ORTHO05D007905 3.5e-106 389.8 601 38.8
Gohir.A11G181766 Gossypium hirsutum HOM05D006531 ORTHO05D007905 1.4e-99 367.9 400 48.5
unitig_0.g471 Utricularia gibba HOM05D006531 ORTHO05D007905 2.5e-96 357.1 549 39.9
Manes.02G098000 Manihot esculenta HOM05D006531 ORTHO05D007905 3.1e-94 350.1 418 45.7
ATR0585G072 Amborella trichopoda HOM05D006531 ORTHO05D007905 9.9e-93 345.1 570 36.1
Os02g0130900 Oryza sativa ssp. japonica HOM05D006531 ORTHO05D007905 9.9e-93 345.1 590 36.9
Peaxi162Scf00010g00816 Petunia axillaris HOM05D006531 ORTHO05D007905 4.6e-90 336.3 553 38.9
Carub.0005s0479 Capsella rubella HOM05D006531 ORTHO05D007905 1.1e-86 325.1 431 43.9
HPP92_011628 Vanilla planifolia HOM05D006531 ORTHO05D007905 3.9e-81 306.6 537 36.5
MBI16_g36847_MAGBIO Magnolia biondii HOM05D006531 ORTHO05D007905 3.3e-80 303.5 451 40.6
SGA_v2.0_scaffold12G06335 Striga asiatica HOM05D006531 ORTHO05D007905 8.1e-79 298.9 396 42.7
Hma1.2p1_3019F.1_g331750 Hydrangea macrophylla HOM05D006531 ORTHO05D007905 9.0e-78 295.4 368 45.7
Phvul.003G257166 Phaseolus vulgaris HOM05D006531 ORTHO05D007905 4.6e-66 256.5 253 51.8
Phvul.003G257232 Phaseolus vulgaris HOM05D006531 ORTHO05D007905 9.6e-64 248.8 239 49.4
Mapoly0011s0081 Marchantia polymorpha HOM05D006531 ORTHO05D007905 6.7e-57 226.1 617 28.4
Nn5g29702 Nelumbo nucifera HOM05D006531 ORTHO05D007905 8.2e-55 219.2 565 29.2
Zm00001eb209020 Zea mays HOM05D006531 ORTHO05D007905 1.7e-52 211.5 500 30.8
MBI14_g29302_MAGBIO Magnolia biondii HOM05D006531 ORTHO05D007905 2.5e-51 207.6 191 52.4
Pp3c2_6980 Physcomitrium patens HOM05D006531 ORTHO05D007905 2.7e-50 204.1 604 26.2
TAR376G0004 Trochodendron aralioides HOM05D006531 ORTHO05D007905 3.1e-38 164.1 143 57.3
CSS0007477 Camellia sinensis var. sinensis HOM05D006531 ORTHO05D007905 3.4e-37 160.6 134 57.5
vmacro23089 Vaccinium macrocarpon HOM05D006531 ORTHO05D007905 2.9e-36 157.5 139 56.1
AagrBONN_evm.TU.Sc2ySwM_368.1148 Anthoceros agrestis HOM05D006531 ORTHO05D007905 5.7e-32 143.3 438 25.3
TAR376G0395 Trochodendron aralioides HOM05D006531 ORTHO05D007905 5.7e-32 143.3 149 50.3
Zm00001eb231290 Zea mays HOM05D006531 ORTHO05D007905 4.1e-30 137.1 191 40.8
Lj2g0008134 Lotus japonicus HOM05D006531 ORTHO05D007905 1.0e-25 122.5 155 47.1
Carub.0006s2991 Capsella rubella HOM05D006531 ORTHO05D007905 1.6e-21 108.6 408 27.2
SEGI_05601 Sequoiadendron giganteum HOM05D006531 ORTHO05D007905 3.2e-19 100.9 329 26.1
Sc07g0000850 Simmondsia chinensis HOM05D006531 ORTHO05D007905 8.0e-10 69.7 73 43.8
TAR629G1149 Trochodendron aralioides HOM05D006531 ORTHO05D007905 2.0e-08 65.1 78 43.6
CDE06G1394 Ceratophyllum demersum HOM05D006531 ORTHO05D007905 2.8e-07 61.2 76 36.8
CBR_g8866 Chara braunii HOM05D006531 ORTHO05D007905 6.3e-07 60.1 149 27.5
RcHm_v2.0_Chr4g0390451 Rosa chinensis HOM05D006531 ORTHO05D007905 1.4e-06 58.9 43 65.1


User provided reference genes

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