Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_6G044750 Cucumis sativus L. HOM05D007087 ORTHO05D008968 4.2e-34 147.5 77 100.0
MELO3C007697.2 Cucumis melo HOM05D007087 ORTHO05D008968 5.1e-32 140.6 72 100.0
Atru.chr3.1157 Acer truncatum HOM05D007087 ORTHO05D008968 5.6e-31 137.1 72 95.8
Atru.chr3.1173 Acer truncatum HOM05D007087 ORTHO05D008968 5.6e-31 137.1 72 95.8
CSS0037594 Camellia sinensis var. sinensis HOM05D007087 ORTHO05D008968 1.6e-30 135.6 72 95.8
CSS0044951 Camellia sinensis var. sinensis HOM05D007087 ORTHO05D008968 1.6e-30 135.6 72 95.8
Cfa006833 Carpinus fangiana HOM05D007087 ORTHO05D008968 1.6e-30 135.6 72 95.8
Dinv27003 Davidia involucrata HOM05D007087 ORTHO05D008968 1.6e-30 135.6 72 95.8
Hma1.2p1_0080F.1_g042080 Hydrangea macrophylla HOM05D007087 ORTHO05D008968 1.6e-30 135.6 72 95.8
QL06p037367 Quercus lobata HOM05D007087 ORTHO05D008968 1.6e-30 135.6 72 95.8
Lsat_1_v5_gn_4_156341 Lactuca sativa HOM05D007087 ORTHO05D008968 2.1e-30 135.2 72 95.8
Dinv36975 Davidia involucrata HOM05D007087 ORTHO05D008968 3.7e-30 134.4 72 94.4
FvH4_1g19040 Fragaria vesca HOM05D007087 ORTHO05D008968 3.7e-30 134.4 72 94.4
FAN23G1122 Fragaria x ananassa HOM05D007087 ORTHO05D008968 3.7e-30 134.4 72 94.4
FAN26G0060 Fragaria x ananassa HOM05D007087 ORTHO05D008968 3.7e-30 134.4 72 94.4
FAN28G2302 Fragaria x ananassa HOM05D007087 ORTHO05D008968 3.7e-30 134.4 72 94.4
PGR102G1803 Punica granatum HOM05D007087 ORTHO05D008968 3.7e-30 134.4 72 94.4
RcHm_v2.0_Chr2g0110041 Rosa chinensis HOM05D007087 ORTHO05D008968 3.7e-30 134.4 72 94.4
CiPaw.07G042900 Carya illinoinensis HOM05D007087 ORTHO05D008968 4.8e-30 134.0 72 94.4
COL.COLO4_11683 Corchorus olitorius HOM05D007087 ORTHO05D008968 4.8e-30 134.0 72 94.4
ECA232G4432 Erigeron canadensis HOM05D007087 ORTHO05D008968 4.8e-30 134.0 72 94.4
HanXRQChr09g0262861 Helianthus annuus HOM05D007087 ORTHO05D008968 4.8e-30 134.0 72 94.4
vmacro18037 Vaccinium macrocarpon HOM05D007087 ORTHO05D008968 4.8e-30 134.0 72 95.8
arahy.Tifrunner.gnm1.ann1.6G1T2R Arachis hypogaea HOM05D007087 ORTHO05D008968 6.2e-30 133.7 72 94.4
arahy.Tifrunner.gnm1.ann1.NU08EI Arachis hypogaea HOM05D007087 ORTHO05D008968 6.2e-30 133.7 72 94.4
Ca_13466_v3 Cicer arietinum L. HOM05D007087 ORTHO05D008968 6.2e-30 133.7 72 94.4
Glyma.01G020200 Glycine max HOM05D007087 ORTHO05D008968 6.2e-30 133.7 72 94.4
Lj2g0010143 Lotus japonicus HOM05D007087 ORTHO05D008968 6.2e-30 133.7 72 94.4
Medtr5g030935 Medicago truncatula HOM05D007087 ORTHO05D008968 6.2e-30 133.7 72 94.4
Phvul.002G143500 Phaseolus vulgaris HOM05D007087 ORTHO05D008968 6.2e-30 133.7 72 94.4
Psat2g134040 Pisum sativum HOM05D007087 ORTHO05D008968 6.2e-30 133.7 72 94.4
Sc16g0000740 Simmondsia chinensis HOM05D007087 ORTHO05D008968 6.2e-30 133.7 72 93.1
TAR376G1208 Trochodendron aralioides HOM05D007087 ORTHO05D008968 6.2e-30 133.7 72 93.1
ClCG01G018190 Citrullus lanatus HOM05D007087 ORTHO05D008968 8.1e-30 133.3 74 94.6
CiPaw.08G145100 Carya illinoinensis HOM05D007087 ORTHO05D008968 1.1e-29 132.9 72 93.1
Duzib264G0202 Durio zibethinus HOM05D007087 ORTHO05D008968 1.1e-29 132.9 72 93.1
Gohir.A11G208700 Gossypium hirsutum HOM05D007087 ORTHO05D008968 1.1e-29 132.9 72 93.1
Gohir.D11G214800 Gossypium hirsutum HOM05D007087 ORTHO05D008968 1.1e-29 132.9 72 93.1
Gorai.007G230500 Gossypium raimondii HOM05D007087 ORTHO05D008968 1.1e-29 132.9 72 93.1
Oeu024989.2 Olea europaea HOM05D007087 ORTHO05D008968 1.1e-29 132.9 72 93.1
TWI77G0839 Tripterygium wilfordii HOM05D007087 ORTHO05D008968 1.1e-29 132.9 72 93.1
Actinidia16395 Actinidia chinensis HOM05D007087 ORTHO05D008968 1.4e-29 132.5 72 93.1
HanXRQChr11g0324431 Helianthus annuus HOM05D007087 ORTHO05D008968 1.4e-29 132.5 72 93.1
MD01G1044400 Malus domestica HOM05D007087 ORTHO05D008968 1.4e-29 132.5 72 93.1
Manes.12G121500 Manihot esculenta HOM05D007087 ORTHO05D008968 1.4e-29 132.5 72 93.1
Prupe.6G209300 Prunus persica HOM05D007087 ORTHO05D008968 1.4e-29 132.5 72 93.1
TPR.G37071 Trifolium pratense HOM05D007087 ORTHO05D008968 1.4e-29 132.5 72 93.1
EL10Ac6g13306 Beta vulgaris HOM05D007087 ORTHO05D008968 2.4e-29 131.7 72 90.3
Ciclev10027006m.g Citrus clementina HOM05D007087 ORTHO05D008968 2.4e-29 131.7 72 93.1
Glyma.09G202200 Glycine max HOM05D007087 ORTHO05D008968 2.4e-29 131.7 72 93.1
Actinidia22784 Actinidia chinensis HOM05D007087 ORTHO05D008968 3.1e-29 131.3 72 91.7
Eucgr.I00598 Eucalyptus grandis HOM05D007087 ORTHO05D008968 3.1e-29 131.3 72 93.1
Eucgr.I00599 Eucalyptus grandis HOM05D007087 ORTHO05D008968 3.1e-29 131.3 72 93.1
Duzib147G0219 Durio zibethinus HOM05D007087 ORTHO05D008968 4.0e-29 131.0 72 91.7
MBI16_g36494_MAGBIO Magnolia biondii HOM05D007087 ORTHO05D008968 4.0e-29 131.0 72 91.7
TWI53G1267 Tripterygium wilfordii HOM05D007087 ORTHO05D008968 4.0e-29 131.0 72 93.1
AL4G12190 Arabidopsis lyrata HOM05D007087 ORTHO05D008968 5.3e-29 130.6 72 91.7
AT2G22640 Arabidopsis thaliana HOM05D007087 ORTHO05D008968 5.3e-29 130.6 72 91.7
BcaB06g27810 Brassica carinata HOM05D007087 ORTHO05D008968 5.3e-29 130.6 72 91.7
Carub.0004s0180 Capsella rubella HOM05D007087 ORTHO05D008968 5.3e-29 130.6 72 91.7
Thhalv10000402m.g Eutrema salsugineum HOM05D007087 ORTHO05D008968 5.3e-29 130.6 72 91.7
Lalb_Chr05g0216201 Lupinus albus HOM05D007087 ORTHO05D008968 5.3e-29 130.6 72 91.7
Sp4g01675 Schrenkiella parvula HOM05D007087 ORTHO05D008968 5.3e-29 130.6 72 91.7
Cpa.g.sc129.16 Carica papaya HOM05D007087 ORTHO05D008968 6.9e-29 130.2 72 91.7
AUR62005889 Chenopodium quinoa HOM05D007087 ORTHO05D008968 6.9e-29 130.2 72 88.9
Thecc.01G084300 Theobroma cacao HOM05D007087 ORTHO05D008968 6.9e-29 130.2 72 91.7
Lalb_Chr09g0325791 Lupinus albus HOM05D007087 ORTHO05D008968 9.0e-29 129.8 72 93.1
THA.LOC104807661 Tarenaya hassleriana HOM05D007087 ORTHO05D008968 1.5e-28 129.0 72 90.3
TAR625G1164 Trochodendron aralioides HOM05D007087 ORTHO05D008968 2.0e-28 128.6 73 87.7
ATR0800G005 Amborella trichopoda HOM05D007087 ORTHO05D008968 2.6e-28 128.3 72 88.9
Migut.L00449 Erythranthe guttata HOM05D007087 ORTHO05D008968 3.4e-28 127.9 72 87.5
THA.LOC104824923 Tarenaya hassleriana HOM05D007087 ORTHO05D008968 3.4e-28 127.9 72 88.9
Hund16615 Selenicereus undatus HOM05D007087 ORTHO05D008968 7.6e-28 126.7 68 92.6
BcaC02g08628 Brassica carinata HOM05D007087 ORTHO05D008968 1.3e-27 125.9 73 90.4
A04p17120 Brassica napus HOM05D007087 ORTHO05D008968 1.3e-27 125.9 73 90.4
C04p51930 Brassica napus HOM05D007087 ORTHO05D008968 1.3e-27 125.9 73 90.4
BolC4t26765H Brassica oleracea HOM05D007087 ORTHO05D008968 1.3e-27 125.9 73 90.4
BraA04t17341Z Brassica rapa HOM05D007087 ORTHO05D008968 1.3e-27 125.9 73 90.4
PSO017G4672 Papaver somniferum HOM05D007087 ORTHO05D008968 1.3e-27 125.9 74 89.2
PSO478G0358 Papaver somniferum HOM05D007087 ORTHO05D008968 1.3e-27 125.9 74 89.2
Aqoxy5G01405 Aquilegia oxysepala HOM05D007087 ORTHO05D008968 2.2e-27 125.2 74 86.5
CDE01G0651 Ceratophyllum demersum HOM05D007087 ORTHO05D008968 1.1e-26 122.9 72 83.3
COL.COLO4_02760 Corchorus olitorius HOM05D007087 ORTHO05D008968 1.1e-26 122.9 82 80.5
Zm00001eb259430 Zea mays HOM05D007087 ORTHO05D008968 1.6e-25 119.0 72 83.3
Potri.014G010000 Populus trichocarpa HOM05D007087 ORTHO05D008968 4.6e-25 117.5 79 77.2
CAN.G11.24 Capsicum annuum HOM05D007087 ORTHO05D008968 6.0e-25 117.1 72 83.3
Sed0015245 Sechium edule HOM05D007087 ORTHO05D008968 5.1e-24 114.0 57 98.2
Cc07_g07910 Coffea canephora HOM05D007087 ORTHO05D008968 8.2e-22 106.7 72 77.8
A09p57350 Brassica napus HOM05D007087 ORTHO05D008968 1.4e-21 105.9 71 78.9
BraA09t41128Z Brassica rapa HOM05D007087 ORTHO05D008968 1.4e-21 105.9 71 78.9
Nitab4.5_0000465g0110 Nicotiana tabacum HOM05D007087 ORTHO05D008968 1.8e-21 105.5 72 76.4
Solyc03g043720.4 Solanum lycopersicum HOM05D007087 ORTHO05D008968 1.8e-21 105.5 72 76.4
Sopen03g007570 Solanum pennellii HOM05D007087 ORTHO05D008968 1.8e-21 105.5 72 76.4
PGSC0003DMG400016688 Solanum tuberosum HOM05D007087 ORTHO05D008968 1.8e-21 105.5 72 76.4
Peaxi162Scf00118g00061 Petunia axillaris HOM05D007087 ORTHO05D008968 3.1e-21 104.8 72 76.4
Os02g0829900 Oryza sativa ssp. japonica HOM05D007087 ORTHO05D008968 4.1e-21 104.4 74 77.0
Sabra14G0004400 Salix brachista HOM05D007087 ORTHO05D008968 6.9e-21 103.6 60 81.7
Sabra14G0001400 Salix brachista HOM05D007087 ORTHO05D008968 2.6e-20 101.7 62 79.0
BcaB08g35111 Brassica carinata HOM05D007087 ORTHO05D008968 3.8e-19 97.8 79 67.1
Pp3c8_2740 Physcomitrium patens HOM05D007087 ORTHO05D008968 7.2e-18 93.6 67 67.2
Mapoly0132s0041 Marchantia polymorpha HOM05D007087 ORTHO05D008968 3.6e-17 91.3 66 66.7
AagrBONN_evm.TU.Sc2ySwM_344.2813 Anthoceros agrestis HOM05D007087 ORTHO05D008968 1.0e-16 89.7 66 62.1
Nn5g29785 Nelumbo nucifera HOM05D007087 ORTHO05D008968 5.1e-16 87.4 64 71.9
Aa31LG7G14170 Aethionema arabicum HOM05D007087 ORTHO05D008968 9.7e-15 83.2 44 88.6
SMO144G0170 Selaginella moellendorffii HOM05D007087 ORTHO05D008968 2.8e-14 81.6 63 57.1
Nitab4.5_0008656g0010 Nicotiana tabacum HOM05D007087 ORTHO05D008968 2.4e-13 78.6 55 76.4
Actinidia36375 Actinidia chinensis HOM05D007087 ORTHO05D008968 6.9e-13 77.0 75 57.3
unitig_32.g10648 Utricularia gibba HOM05D007087 ORTHO05D008968 9.1e-13 76.6 46 76.1
FAN19G2569 Fragaria x ananassa HOM05D007087 ORTHO05D008968 5.5e-10 67.4 37 91.9
Nitab4.5_0000465g0080 Nicotiana tabacum HOM05D007087 ORTHO05D008968 3.3e-07 58.2 33 84.8
SEGI_40703 Sequoiadendron giganteum HOM05D007087 ORTHO05D008968 5.7e-07 57.4 51 45.1


User provided reference genes

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