Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_6G044310 Cucumis sativus L. HOM05D005317 ORTHO05D005146 1.3e-84 316.2 149 100.0
ClCG01G017790 Citrullus lanatus HOM05D005317 ORTHO05D005146 2.8e-34 149.1 152 63.8
Sed0021979 Sechium edule HOM05D005317 ORTHO05D005146 1.7e-23 113.2 146 50.7
Sed0025721 Sechium edule HOM05D005317 ORTHO05D005146 2.9e-15 85.9 135 47.4
Manes.13G109200 Manihot esculenta HOM05D005317 ORTHO05D005146 2.1e-10 69.7 155 38.1
Sabra07G0005300 Salix brachista HOM05D005317 ORTHO05D005146 2.1e-10 69.7 154 35.1
Cfa004386 Carpinus fangiana HOM05D005317 ORTHO05D005146 2.8e-10 69.3 133 32.3
Nn5g30662 Nelumbo nucifera HOM05D005317 ORTHO05D005146 2.8e-10 69.3 145 38.6
Eucgr.H02331 Eucalyptus grandis HOM05D005317 ORTHO05D005146 4.8e-10 68.6 158 36.1
Gohir.A02G149800 Gossypium hirsutum HOM05D005317 ORTHO05D005146 8.1e-10 67.8 143 40.6
CSS0048752 Camellia sinensis var. sinensis HOM05D005317 ORTHO05D005146 1.1e-09 67.4 163 35.6
Aqoxy6G02455 Aquilegia oxysepala HOM05D005317 ORTHO05D005146 1.4e-09 67.0 142 36.6
Prupe.6G217200 Prunus persica HOM05D005317 ORTHO05D005146 1.8e-09 66.6 166 37.3
Ciclev10026641m.g Citrus clementina HOM05D005317 ORTHO05D005146 3.1e-09 65.9 158 37.3
Sabra14G0007800 Salix brachista HOM05D005317 ORTHO05D005146 6.9e-09 64.7 156 28.8
Oeu053645.1 Olea europaea HOM05D005317 ORTHO05D005146 1.2e-08 63.9 171 32.2
Thecc.01G076000 Theobroma cacao HOM05D005317 ORTHO05D005146 1.5e-08 63.5 155 34.2
TAR628G1097 Trochodendron aralioides HOM05D005317 ORTHO05D005146 1.5e-08 63.5 164 33.5
CiPaw.01G002200 Carya illinoinensis HOM05D005317 ORTHO05D005146 2.6e-08 62.8 151 38.4
Lalb_Chr09g0335521 Lupinus albus HOM05D005317 ORTHO05D005146 2.6e-08 62.8 145 34.5
Phvul.003G233000 Phaseolus vulgaris HOM05D005317 ORTHO05D005146 3.4e-08 62.4 148 35.8
RcHm_v2.0_Chr2g0108721 Rosa chinensis HOM05D005317 ORTHO05D005146 3.4e-08 62.4 181 34.8
Glyma.05G108400 Glycine max HOM05D005317 ORTHO05D005146 4.5e-08 62.0 154 36.4
COL.COLO4_28461 Corchorus olitorius HOM05D005317 ORTHO05D005146 7.6e-08 61.2 142 33.1
Oeu047228.1 Olea europaea HOM05D005317 ORTHO05D005146 7.6e-08 61.2 156 33.3
Potri.007G007000 Populus trichocarpa HOM05D005317 ORTHO05D005146 9.9e-08 60.8 161 33.5
Haze_15027 Corylus avellana HOM05D005317 ORTHO05D005146 2.2e-07 59.7 145 33.1
Gohir.A06G025600 Gossypium hirsutum HOM05D005317 ORTHO05D005146 2.9e-07 59.3 154 34.4
Potri.014G013000 Populus trichocarpa HOM05D005317 ORTHO05D005146 2.9e-07 59.3 156 29.5
FAN23G2069 Fragaria x ananassa HOM05D005317 ORTHO05D005146 3.8e-07 58.9 181 32.0
FAN26G0581 Fragaria x ananassa HOM05D005317 ORTHO05D005146 3.8e-07 58.9 178 32.0
Ciclev10027255m.g Citrus clementina HOM05D005317 ORTHO05D005146 4.9e-07 58.5 150 34.7
Psat6g017280 Pisum sativum HOM05D005317 ORTHO05D005146 4.9e-07 58.5 135 34.1
Dinv23042 Davidia involucrata HOM05D005317 ORTHO05D005146 6.4e-07 58.2 136 36.8
Medtr4g097480 Medicago truncatula HOM05D005317 ORTHO05D005146 6.4e-07 58.2 150 32.0
QL06p038960 Quercus lobata HOM05D005317 ORTHO05D005146 8.4e-07 57.8 156 35.3
Oeu021452.1 Olea europaea HOM05D005317 ORTHO05D005146 1.4e-06 57.0 145 31.0
TAR381G0867 Trochodendron aralioides HOM05D005317 ORTHO05D005146 1.4e-06 57.0 137 32.1
TAR376G0587 Trochodendron aralioides HOM05D005317 ORTHO05D005146 1.9e-06 56.6 147 33.3
Gohir.D06G022700 Gossypium hirsutum HOM05D005317 ORTHO05D005146 2.4e-06 56.2 150 35.3
GSVIVG01009301001 Vitis vinifera HOM05D005317 ORTHO05D005146 2.4e-06 56.2 146 34.2
Atru.chr3.1057 Acer truncatum HOM05D005317 ORTHO05D005146 3.2e-06 55.8 164 32.3
Gohir.D03G030600 Gossypium hirsutum HOM05D005317 ORTHO05D005146 3.2e-06 55.8 140 36.4
Hma1.2p1_1139F.1_g260880 Hydrangea macrophylla HOM05D005317 ORTHO05D005146 3.2e-06 55.8 145 33.8
Oeu014288.1 Olea europaea HOM05D005317 ORTHO05D005146 3.2e-06 55.8 145 32.4
Aqoxy6G02509 Aquilegia oxysepala HOM05D005317 ORTHO05D005146 4.2e-06 55.5 85 40.0
Dinv26957 Davidia involucrata HOM05D005317 ORTHO05D005146 4.2e-06 55.5 107 39.3
VMungo0251G0145 Vigna mungo HOM05D005317 ORTHO05D005146 4.2e-06 55.5 145 33.8
Manes.05G183500 Manihot esculenta HOM05D005317 ORTHO05D005146 5.5e-06 55.1 145 27.6
TPR.G13020 Trifolium pratense HOM05D005317 ORTHO05D005146 5.5e-06 55.1 94 37.2
Atru.chr13.870 Acer truncatum HOM05D005317 ORTHO05D005146 7.1e-06 54.7 126 36.5
Cpa.g.c31093.6 Carica papaya HOM05D005317 ORTHO05D005146 7.1e-06 54.7 131 32.1
Gohir.A12G080100 Gossypium hirsutum HOM05D005317 ORTHO05D005146 7.1e-06 54.7 139 35.3
Gorai.010G027300 Gossypium raimondii HOM05D005317 ORTHO05D005146 7.1e-06 54.7 150 35.3
SalBow3G0220 Salvia bowleyana HOM05D005317 ORTHO05D005146 7.1e-06 54.7 140 35.0
Gorai.003G032200 Gossypium raimondii HOM05D005317 ORTHO05D005146 9.3e-06 54.3 140 35.7


User provided reference genes

Program Settings