Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_6G043990 Cucumis sativus L. HOM05D007381 ORTHO05D009496 1.9e-175 619.0 306 100.0
MELO3C007622.2 Cucumis melo HOM05D007381 ORTHO05D009496 4.5e-172 607.8 306 98.0
Sed0015462 Sechium edule HOM05D007381 ORTHO05D009496 2.4e-165 585.5 306 93.8
ClCG01G017450 Citrullus lanatus HOM05D007381 ORTHO05D009496 3.3e-159 565.1 390 75.9
MD15G1294900 Malus domestica HOM05D007381 ORTHO05D009496 8.2e-158 560.5 306 88.6
Prupe.6G222900 Prunus persica HOM05D007381 ORTHO05D009496 1.1e-157 560.1 306 88.6
Dinv26914 Davidia involucrata HOM05D007381 ORTHO05D009496 5.3e-157 557.8 307 87.9
Dinv30077 Davidia involucrata HOM05D007381 ORTHO05D009496 9.1e-157 557.0 307 87.9
TAR628G1049 Trochodendron aralioides HOM05D007381 ORTHO05D009496 4.5e-156 554.7 307 88.3
MD00G1015500 Malus domestica HOM05D007381 ORTHO05D009496 1.0e-155 553.5 306 87.3
VMungo1215G2498 Vigna mungo HOM05D007381 ORTHO05D009496 7.2e-154 547.4 306 85.9
Lj2g0010288 Lotus japonicus HOM05D007381 ORTHO05D009496 1.6e-153 546.2 306 85.3
RcHm_v2.0_Chr2g0107591 Rosa chinensis HOM05D007381 ORTHO05D009496 1.6e-153 546.2 306 85.6
GSVIVG01000134001 Vitis vinifera HOM05D007381 ORTHO05D009496 1.4e-152 543.1 307 86.6
Phvul.002G012100 Phaseolus vulgaris HOM05D007381 ORTHO05D009496 3.0e-152 542.0 306 85.3
PGR102G2572 Punica granatum HOM05D007381 ORTHO05D009496 3.9e-152 541.6 307 86.3
Gohir.D10G098200 Gossypium hirsutum HOM05D007381 ORTHO05D009496 1.5e-151 539.7 307 85.0
PSO170G6067 Papaver somniferum HOM05D007381 ORTHO05D009496 1.5e-151 539.7 307 85.0
Ca_24708_v3 Cicer arietinum L. HOM05D007381 ORTHO05D009496 2.6e-151 538.9 306 84.3
FvH4_1g17400 Fragaria vesca HOM05D007381 ORTHO05D009496 3.3e-151 538.5 306 84.6
Glyma.11G048900 Glycine max HOM05D007381 ORTHO05D009496 7.4e-151 537.3 306 85.0
Gorai.011G107900 Gossypium raimondii HOM05D007381 ORTHO05D009496 7.4e-151 537.3 307 84.7
CSS0029250 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 1.3e-150 536.6 307 85.0
CSS0037700 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 2.2e-150 535.8 307 85.0
CANSAT01G2210 Cannabis sativa HOM05D007381 ORTHO05D009496 2.2e-150 535.8 306 85.9
Glyma.01G192900 Glycine max HOM05D007381 ORTHO05D009496 2.2e-150 535.8 306 84.3
Lalb_Chr05g0213621 Lupinus albus HOM05D007381 ORTHO05D009496 2.2e-150 535.8 306 84.6
FAN23G1987 Fragaria x ananassa HOM05D007381 ORTHO05D009496 2.8e-150 535.4 306 84.0
arahy.Tifrunner.gnm1.ann1.S5EEEI Arachis hypogaea HOM05D007381 ORTHO05D009496 3.7e-150 535.0 306 83.7
Rhsim08G0094800 Rhododendron simsii HOM05D007381 ORTHO05D009496 4.8e-150 534.6 307 84.0
COL.COLO4_11553 Corchorus olitorius HOM05D007381 ORTHO05D009496 8.2e-150 533.9 307 85.7
Cpa.g.sc6.38 Carica papaya HOM05D007381 ORTHO05D009496 5.3e-149 531.2 307 85.0
Gohir.A10G089900 Gossypium hirsutum HOM05D007381 ORTHO05D009496 5.3e-149 531.2 307 83.7
Aqoxy5G00892 Aquilegia oxysepala HOM05D007381 ORTHO05D009496 7.0e-149 530.8 307 84.0
arahy.Tifrunner.gnm1.ann1.I4PWFV Arachis hypogaea HOM05D007381 ORTHO05D009496 9.1e-149 530.4 306 83.0
Eucgr.H02297 Eucalyptus grandis HOM05D007381 ORTHO05D009496 1.6e-148 529.6 307 83.7
Medtr5g015840 Medicago truncatula HOM05D007381 ORTHO05D009496 5.9e-148 527.7 306 83.7
FAN19G2977 Fragaria x ananassa HOM05D007381 ORTHO05D009496 1.3e-147 526.6 322 80.1
Cc07_g06930 Coffea canephora HOM05D007381 ORTHO05D009496 1.7e-147 526.2 307 82.7
HanXRQChr12g0373171 Helianthus annuus HOM05D007381 ORTHO05D009496 3.8e-147 525.0 307 82.4
TPR.G20964 Trifolium pratense HOM05D007381 ORTHO05D009496 3.8e-147 525.0 306 82.7
Manes.12G110400 Manihot esculenta HOM05D007381 ORTHO05D009496 5.0e-147 524.6 306 81.7
Actinidia16435 Actinidia chinensis HOM05D007381 ORTHO05D009496 1.1e-146 523.5 307 83.4
Lalb_Chr16g0378811 Lupinus albus HOM05D007381 ORTHO05D009496 2.5e-146 522.3 306 83.0
Nn1g04598 Nelumbo nucifera HOM05D007381 ORTHO05D009496 7.2e-146 520.8 307 81.4
Lsat_1_v5_gn_4_160940 Lactuca sativa HOM05D007381 ORTHO05D009496 9.4e-146 520.4 307 81.4
Thecc.01G070300 Theobroma cacao HOM05D007381 ORTHO05D009496 1.2e-145 520.0 307 82.7
Atru.chr3.157 Acer truncatum HOM05D007381 ORTHO05D009496 1.6e-145 519.6 307 83.1
Atru.chr3.186 Acer truncatum HOM05D007381 ORTHO05D009496 1.6e-145 519.6 307 83.1
Migut.H00360 Erythranthe guttata HOM05D007381 ORTHO05D009496 6.1e-145 517.7 307 80.8
Peaxi162Scf00264g00118 Petunia axillaris HOM05D007381 ORTHO05D009496 2.0e-143 512.7 307 79.8
EL10Ac6g15638 Beta vulgaris HOM05D007381 ORTHO05D009496 4.4e-143 511.5 307 78.8
ECA232G2614 Erigeron canadensis HOM05D007381 ORTHO05D009496 5.7e-143 511.1 304 81.2
CAN.G1075.23 Capsicum annuum HOM05D007381 ORTHO05D009496 2.8e-142 508.8 307 79.5
Sopen02g037070 Solanum pennellii HOM05D007381 ORTHO05D009496 2.8e-142 508.8 307 79.2
Potri.007G053900 Populus trichocarpa HOM05D007381 ORTHO05D009496 1.1e-141 506.9 307 80.8
PGSC0003DMG400024934 Solanum tuberosum HOM05D007381 ORTHO05D009496 4.1e-141 505.0 307 78.5
Lj4A160G63 Lonicera japonica HOM05D007381 ORTHO05D009496 1.2e-140 503.4 358 71.8
Solyc02g092510.3 Solanum lycopersicum HOM05D007381 ORTHO05D009496 2.0e-140 502.7 307 78.2
Ciclev10025991m.g Citrus clementina HOM05D007381 ORTHO05D009496 4.5e-140 501.5 288 83.7
vmacro17999 Vaccinium macrocarpon HOM05D007381 ORTHO05D009496 6.5e-139 497.7 370 68.6
THA.LOC104819874 Tarenaya hassleriana HOM05D007381 ORTHO05D009496 2.7e-137 492.3 307 78.5
CDE07G0114 Ceratophyllum demersum HOM05D007381 ORTHO05D009496 3.0e-136 488.8 307 75.2
Zm00001eb108230 Zea mays HOM05D007381 ORTHO05D009496 3.0e-136 488.8 306 76.5
Cfa004113 Carpinus fangiana HOM05D007381 ORTHO05D009496 5.2e-136 488.0 305 80.3
SEGI_03968 Sequoiadendron giganteum HOM05D007381 ORTHO05D009496 6.8e-136 487.6 306 75.2
Os07g0588800 Oryza sativa ssp. japonica HOM05D007381 ORTHO05D009496 1.2e-135 486.9 307 75.9
Aa31LG6G14440 Aethionema arabicum HOM05D007381 ORTHO05D009496 4.4e-135 485.0 307 75.9
Oeu040581.2 Olea europaea HOM05D007381 ORTHO05D009496 4.8e-134 481.5 371 65.8
ATR0019G019 Amborella trichopoda HOM05D007381 ORTHO05D009496 1.8e-133 479.6 307 75.2
FAN28G2520 Fragaria x ananassa HOM05D007381 ORTHO05D009496 2.0e-132 476.1 276 83.0
FAN26G1164 Fragaria x ananassa HOM05D007381 ORTHO05D009496 4.5e-132 474.9 275 83.3
Haze_15300 Corylus avellana HOM05D007381 ORTHO05D009496 5.9e-132 474.6 313 77.6
unitig_899.g14582 Utricularia gibba HOM05D007381 ORTHO05D009496 1.1e-130 470.3 307 74.3
TWI73G0080 Tripterygium wilfordii HOM05D007381 ORTHO05D009496 3.4e-127 458.8 307 75.2
SGA_v2.0_scaffold15G07431 Striga asiatica HOM05D007381 ORTHO05D009496 1.0e-123 447.2 277 76.5
Sabra07G0047100 Salix brachista HOM05D007381 ORTHO05D009496 7.3e-122 441.0 293 75.4
DCAR_021466 Daucus carota HOM05D007381 ORTHO05D009496 1.6e-121 439.9 307 70.7
Nitab4.5_0000651g0120 Nicotiana tabacum HOM05D007381 ORTHO05D009496 4.7e-121 438.3 278 75.5
CiPaw.01G006100 Carya illinoinensis HOM05D007381 ORTHO05D009496 1.2e-119 433.7 243 86.0
Nitab4.5_0006069g0020 Nicotiana tabacum HOM05D007381 ORTHO05D009496 9.8e-119 430.6 277 74.4
Hma1.2p1_0730F.1_g209840 Hydrangea macrophylla HOM05D007381 ORTHO05D009496 1.0e-115 420.6 235 86.4
AagrBONN_evm.TU.Sc2ySwM_362.1621 Anthoceros agrestis HOM05D007381 ORTHO05D009496 1.8e-112 409.8 310 64.8
Pp3c18_1320 Physcomitrium patens HOM05D007381 ORTHO05D009496 4.4e-111 405.2 312 63.1
Duzib187G0033 Durio zibethinus HOM05D007381 ORTHO05D009496 7.5e-111 404.4 307 68.4
Mapoly0084s0082 Marchantia polymorpha HOM05D007381 ORTHO05D009496 1.1e-104 384.0 306 60.1
SEGI_30700 Sequoiadendron giganteum HOM05D007381 ORTHO05D009496 7.5e-103 377.9 236 76.3
SMO268G0024 Selaginella moellendorffii HOM05D007381 ORTHO05D009496 2.9e-102 375.9 297 61.3
Cre07.g344150 Chlamydomonas reinhardtii HOM05D007381 ORTHO05D009496 8.1e-81 304.7 316 50.9
Hund13939 Selenicereus undatus HOM05D007381 ORTHO05D009496 2.9e-78 296.2 243 63.0
HPP92_026572 Vanilla planifolia HOM05D007381 ORTHO05D009496 8.7e-75 284.6 190 71.1
QL06p039803 Quercus lobata HOM05D007381 ORTHO05D009496 1.9e-61 240.4 130 86.9
MCO12G353 Micromonas commoda HOM05D007381 ORTHO05D009496 2.7e-60 236.5 310 43.5
ATR0019G012 Amborella trichopoda HOM05D007381 ORTHO05D009496 2.5e-58 229.9 148 75.7
CSS0032842 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 7.4e-58 228.4 170 70.6
PRCOL_00002255 Prasinoderma coloniale HOM05D007381 ORTHO05D009496 1.8e-56 223.8 281 44.5
CBR_g40647 Chara braunii HOM05D007381 ORTHO05D009496 7.7e-55 218.4 565 28.7
Ca_17124_v3 Cicer arietinum L. HOM05D002459 ORTHO05D003006 4.0e-27 126.3 88 73.9
SHI33146 Sapria himalayana HOM05D007381 ORTHO05D009496 3.5e-23 113.2 70 71.4
Ca_08895_v3 Cicer arietinum L. HOM05D002459 ORTHO05D003006 6.5e-22 109.0 72 73.6
Cfa025505 Carpinus fangiana HOM05D007381 ORTHO05D009496 1.9e-21 107.5 222 32.9
CBR_g29716 Chara braunii HOM05D007381 ORTHO05D009496 1.2e-20 104.8 96 51.0
COL.COLO4_34115 Corchorus olitorius HOM05D007381 ORTHO05D159467 7.0e-08 62.4 58 58.6
Rhsim08G0136300 Rhododendron simsii HOM05D007381 ORTHO05D006450 4.6e-07 59.7 53 62.3
Cre06.g298950 Chlamydomonas reinhardtii HOM05D007381 ORTHO05D143024 3.9e-06 56.6 173 28.3


User provided reference genes

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