Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_6G043150 Cucumis sativus L. HOM05D007434 ORTHO05D009541 4.8e-48 194.1 95 100.0
MELO3C007552.2 Cucumis melo HOM05D007434 ORTHO05D009541 2.9e-45 184.9 95 95.8
ClCG01G016730 Citrullus lanatus HOM05D007434 ORTHO05D009541 4.2e-36 154.5 102 78.4
Sed0015330 Sechium edule HOM05D007434 ORTHO05D009541 1.5e-25 119.4 92 65.2
Sed0003827 Sechium edule HOM05D007434 ORTHO05D009541 1.0e-21 106.7 94 64.9
QL06p042177 Quercus lobata HOM05D007434 ORTHO05D009541 2.0e-14 82.4 84 53.6
Atru.chr3.394 Acer truncatum HOM05D007434 ORTHO05D009541 5.0e-13 77.8 94 41.5
FvH4_1g15740 Fragaria vesca HOM05D007434 ORTHO05D009541 2.5e-12 75.5 101 42.6
Prupe.7G136000 Prunus persica HOM05D007434 ORTHO05D009541 2.5e-12 75.5 84 48.8
FAN23G2206 Fragaria x ananassa HOM05D007434 ORTHO05D009541 3.2e-12 75.1 102 41.2
Ciclev10027106m.g Citrus clementina HOM05D007434 ORTHO05D009541 5.5e-12 74.3 96 44.8
Potri.007G041500 Populus trichocarpa HOM05D007434 ORTHO05D009541 1.6e-11 72.8 95 42.1
CiPaw.02G009300 Carya illinoinensis HOM05D007434 ORTHO05D009541 2.1e-11 72.4 89 46.1
FAN28G0198 Fragaria x ananassa HOM05D007434 ORTHO05D009541 2.1e-11 72.4 101 40.6
Nn1g05850 Nelumbo nucifera HOM05D007434 ORTHO05D009541 8.0e-11 70.5 97 40.2
Nn5g30204 Nelumbo nucifera HOM05D007434 ORTHO05D009541 1.4e-10 69.7 91 44.0
CiPaw.01G021200 Carya illinoinensis HOM05D007434 ORTHO05D009541 3.0e-10 68.6 93 45.2
Atru.chr3.392 Acer truncatum HOM05D007434 ORTHO05D009541 4.0e-10 68.2 92 39.1
Manes.12G100300 Manihot esculenta HOM05D007434 ORTHO05D009541 2.0e-09 65.9 82 48.8
Manes.13G126300 Manihot esculenta HOM05D007434 ORTHO05D009541 1.7e-08 62.8 95 44.2
Phvul.002G020200 Phaseolus vulgaris HOM05D007434 ORTHO05D009541 2.2e-08 62.4 105 41.9
TPR.G19016 Trifolium pratense HOM05D007434 ORTHO05D009541 2.2e-08 62.4 88 43.2
COL.COLO4_11386 Corchorus olitorius HOM05D007434 ORTHO05D009541 2.8e-08 62.0 87 41.4
Glyma.05G083900 Glycine max HOM05D007434 ORTHO05D009541 2.8e-08 62.0 86 41.9
Aqoxy6G01381 Aquilegia oxysepala HOM05D007434 ORTHO05D009541 6.3e-08 60.8 76 44.7
Atru.chr3.391 Acer truncatum HOM05D007434 ORTHO05D009541 1.1e-07 60.1 92 34.8
Potri.007G041400 Populus trichocarpa HOM05D007434 ORTHO05D009541 1.1e-07 60.1 104 39.4
Haze_15425 Corylus avellana HOM05D007434 ORTHO05D009541 1.4e-07 59.7 72 48.6
Lalb_Chr05g0213231 Lupinus albus HOM05D007434 ORTHO05D009541 1.4e-07 59.7 94 38.3
Lalb_Chr09g0333721 Lupinus albus HOM05D007434 ORTHO05D009541 1.4e-07 59.7 93 40.9
FAN26G1295 Fragaria x ananassa HOM05D007434 ORTHO05D019139 1.8e-07 59.3 83 39.8
Nn1g05851 Nelumbo nucifera HOM05D007434 ORTHO05D009541 2.4e-07 58.9 90 37.8
Potri.007G042000 Populus trichocarpa HOM05D008581 ORTHO05D009966 2.4e-07 58.9 121 35.5
Glyma.11G057300 Glycine max HOM05D007434 ORTHO05D009541 3.1e-07 58.5 83 37.3
Lj2g0026149 Lotus japonicus HOM05D007434 ORTHO05D009541 3.1e-07 58.5 90 36.7
Ciclev10027212m.g Citrus clementina HOM05D007434 ORTHO05D009541 4.1e-07 58.2 85 45.9
Migut.H00450 Erythranthe guttata HOM05D018578 ORTHO05D020597 5.4e-07 57.8 93 37.6
TPR.G21269 Trifolium pratense HOM05D007434 ORTHO05D009541 5.4e-07 57.8 83 39.8
Medtr5g017710 Medicago truncatula HOM05D007434 ORTHO05D009541 7.0e-07 57.4 83 38.6
Manes.12G100200 Manihot esculenta HOM05D007434 ORTHO05D009541 9.2e-07 57.0 94 36.2
Potri.005G136800 Populus trichocarpa HOM05D008581 ORTHO05D009966 9.2e-07 57.0 116 37.1
Dinv29971 Davidia involucrata HOM05D008581 ORTHO05D009541 1.2e-06 56.6 62 50.0
QL06p042201 Quercus lobata HOM05D007434 ORTHO05D009541 1.2e-06 56.6 89 38.2
arahy.Tifrunner.gnm1.ann1.T0173K Arachis hypogaea HOM05D007434 ORTHO05D009541 1.6e-06 56.2 86 40.7
Lalb_Chr05g0213221 Lupinus albus HOM05D007434 ORTHO05D009541 1.6e-06 56.2 87 37.9
arahy.Tifrunner.gnm1.ann1.0D7IHD Arachis hypogaea HOM05D007434 ORTHO05D009541 2.0e-06 55.8 88 39.8
Sabra07G0037300 Salix brachista HOM05D008581 ORTHO05D009966 2.0e-06 55.8 98 38.8
Lalb_Chr09g0323081 Lupinus albus HOM05D007434 ORTHO05D009541 3.5e-06 55.1 91 36.3
Manes.13G126400 Manihot esculenta HOM05D007434 ORTHO05D009541 3.5e-06 55.1 91 35.2
QL06p042091 Quercus lobata HOM05D008581 ORTHO05D009966 3.5e-06 55.1 110 39.1
Lj2g0001941 Lotus japonicus HOM05D007434 ORTHO05D009541 4.5e-06 54.7 96 35.4
Prupe.7G136100 Prunus persica HOM05D007434 ORTHO05D013638 4.5e-06 54.7 94 37.2
QL06p042046 Quercus lobata HOM05D008581 ORTHO05D009966 4.5e-06 54.7 110 39.1
QL06p042132 Quercus lobata HOM05D008581 ORTHO05D009966 4.5e-06 54.7 113 34.5
Glyma.01G184900 Glycine max HOM05D007434 ORTHO05D009541 5.9e-06 54.3 82 36.6
MD15G1281800 Malus domestica HOM05D007434 ORTHO05D009541 7.8e-06 53.9 85 38.8
Phvul.003G245601 Phaseolus vulgaris HOM05D007434 ORTHO05D009541 7.8e-06 53.9 96 40.6


User provided reference genes

Program Settings