Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_6G037360 Cucumis sativus L. HOM05D003347 ORTHO05D003821 3.3e-73 279.3 278 100.0
MELO3C014381.2 Cucumis melo HOM05D003347 ORTHO05D003821 6.1e-67 258.5 278 95.3
Sed0005094 Sechium edule HOM05D003347 ORTHO05D003821 1.7e-48 197.2 279 78.1
TWI14G1287 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 6.8e-42 175.3 282 67.0
ClCG09G014210 Citrullus lanatus HOM05D003347 ORTHO05D003821 2.8e-40 169.9 313 73.5
arahy.Tifrunner.gnm1.ann1.N22SFW Arachis hypogaea HOM05D003347 ORTHO05D003821 9.1e-39 164.9 280 68.2
TAR628G0882 Trochodendron aralioides HOM05D003347 ORTHO05D003821 3.5e-38 162.9 278 68.3
TAR381G0729 Trochodendron aralioides HOM05D003347 ORTHO05D003821 5.9e-38 162.2 280 66.8
VMungo0540G0141 Vigna mungo HOM05D003347 ORTHO05D003821 5.9e-38 162.2 280 71.1
Lj6g0014149 Lotus japonicus HOM05D003347 ORTHO05D003821 1.9e-36 157.1 284 60.9
Gohir.A04G127400 Gossypium hirsutum HOM05D003347 ORTHO05D003821 1.6e-35 154.1 283 66.4
Gorai.008G042400 Gossypium raimondii HOM05D003347 ORTHO05D003821 1.0e-34 151.4 283 65.0
Gohir.D04G172100 Gossypium hirsutum HOM05D003347 ORTHO05D003821 2.3e-34 150.2 283 67.5
TAR376G0009 Trochodendron aralioides HOM05D003347 ORTHO05D003821 2.3e-34 150.2 280 55.7
Thecc.02G038200 Theobroma cacao HOM05D003347 ORTHO05D003821 6.8e-34 148.7 283 65.7
Duzib132G0710 Durio zibethinus HOM05D003347 ORTHO05D003821 2.0e-33 147.1 283 70.0
CDE08G0312 Ceratophyllum demersum HOM05D003347 ORTHO05D003821 4.8e-32 142.5 279 60.6
Gohir.A12G031700 Gossypium hirsutum HOM05D003347 ORTHO05D003821 1.0e-29 134.8 283 66.8
CDE06G2684 Ceratophyllum demersum HOM05D003347 ORTHO05D003821 5.0e-29 132.5 279 59.5
CSS0030084 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 6.6e-29 132.1 191 60.7
Nn5g28237 Nelumbo nucifera HOM05D003347 ORTHO05D003821 6.6e-29 132.1 269 66.5
PGR042G0677 Punica granatum HOM05D003347 ORTHO05D003821 1.1e-28 131.3 281 65.5
Medtr2g007150 Medicago truncatula HOM05D003347 ORTHO05D003821 2.5e-28 130.2 278 65.8
Hma1.2p1_0217F.1_g092040 Hydrangea macrophylla HOM05D003347 ORTHO05D003821 3.3e-28 129.8 281 64.8
Lalb_Chr18g0060901 Lupinus albus HOM05D003347 ORTHO05D003821 3.3e-28 129.8 280 65.0
GSVIVG01022926001 Vitis vinifera HOM05D003347 ORTHO05D003821 1.6e-27 127.5 281 65.8
MBI03_g33029_MAGBIO Magnolia biondii HOM05D003347 ORTHO05D003821 4.7e-27 125.9 280 59.3
Gorai.012G161200 Gossypium raimondii HOM05D003347 ORTHO05D003821 8.0e-27 125.2 304 57.2
Sc03g0004210 Simmondsia chinensis HOM05D003347 ORTHO05D003821 8.0e-27 125.2 280 61.8
Psat1g221480 Pisum sativum HOM05D003347 ORTHO05D003821 2.3e-26 123.6 306 54.2
Hund07201 Selenicereus undatus HOM05D003347 ORTHO05D003821 2.3e-26 123.6 271 53.1
ATR0684G168 Amborella trichopoda HOM05D003347 ORTHO05D003821 6.8e-26 122.1 273 62.3
CSS0039803 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 2.0e-25 120.6 195 57.4
Atru.chr6.636 Acer truncatum HOM05D003347 ORTHO05D003821 2.6e-25 120.2 204 65.2
TPR.G2109 Trifolium pratense HOM05D003347 ORTHO05D003821 1.3e-24 117.9 278 64.0
MD15G1423300 Malus domestica HOM05D003347 ORTHO05D003821 3.7e-24 116.3 159 74.2
Zm00001eb197610 Zea mays HOM05D003347 ORTHO05D003821 3.7e-24 116.3 284 51.8
PSO063G2612 Papaver somniferum HOM05D003347 ORTHO05D003821 4.9e-24 115.9 280 52.5
Dinv34344 Davidia involucrata HOM05D003347 ORTHO05D003821 1.1e-23 114.8 276 58.7
Duzib248G0125 Durio zibethinus HOM05D003347 ORTHO05D003821 1.1e-23 114.8 283 65.0
Prupe.1G568600 Prunus persica HOM05D003347 ORTHO05D003821 9.2e-23 111.7 304 60.2
Glyma.08G186200 Glycine max HOM05D003347 ORTHO05D003821 3.5e-22 109.8 280 60.7
Nn1g08766 Nelumbo nucifera HOM05D003347 ORTHO05D003821 3.5e-22 109.8 275 65.5
AUR62014268 Chenopodium quinoa HOM05D003347 ORTHO05D003821 4.5e-22 109.4 264 61.4
CANSAT11G2200 Cannabis sativa HOM05D003347 ORTHO05D003821 5.9e-22 109.0 282 61.3
Glyma.15G046600 Glycine max HOM05D003347 ORTHO05D003821 1.0e-21 108.2 280 61.4
CiPaw.05G044400 Carya illinoinensis HOM05D003347 ORTHO05D003821 1.3e-21 107.8 280 51.8
CDE06G2842 Ceratophyllum demersum HOM05D003347 ORTHO05D003821 4.3e-20 102.8 279 59.9
Lj9C306T9 Lonicera japonica HOM05D003347 ORTHO05D003821 5.6e-20 102.4 159 75.5
arahy.Tifrunner.gnm1.ann1.CXB9HG Arachis hypogaea HOM05D003347 ORTHO05D003821 7.3e-20 102.1 234 64.5
THA.LOC104823661 Tarenaya hassleriana HOM05D003347 ORTHO05D003821 1.6e-19 100.9 277 54.5
HanXRQChr03g0071751 Helianthus annuus HOM05D003347 ORTHO05D003821 2.8e-19 100.1 159 73.0
Phvul.006G214600 Phaseolus vulgaris HOM05D003347 ORTHO05D003821 2.8e-19 100.1 239 58.6
Haze_01671 Corylus avellana HOM05D003347 ORTHO05D003821 4.7e-19 99.4 235 60.9
Gohir.D12G040600 Gossypium hirsutum HOM05D003347 ORTHO05D003821 6.1e-19 99.0 236 64.8
HPP92_009365 Vanilla planifolia HOM05D003347 ORTHO05D003821 2.3e-18 97.1 190 53.7
TWI79G0161 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 4.0e-18 96.3 285 46.0
Potri.001G211000 Populus trichocarpa HOM05D003347 ORTHO05D003821 5.2e-18 95.9 281 62.3
Oeu008894.1 Olea europaea HOM05D003347 ORTHO05D003821 1.2e-17 94.7 159 67.9
Oeu008895.1 Olea europaea HOM05D003347 ORTHO05D003821 1.2e-17 94.7 159 67.9
THA.LOC104819278 Tarenaya hassleriana HOM05D003347 ORTHO05D003821 1.2e-17 94.7 284 52.5
AUR62042720 Chenopodium quinoa HOM05D003347 ORTHO05D003821 1.5e-17 94.4 183 60.7
Manes.07G015700 Manihot esculenta HOM05D003347 ORTHO05D003821 1.5e-17 94.4 237 60.3
Haze_25385 Corylus avellana HOM05D003347 ORTHO05D003821 2.0e-17 94.0 152 57.9
Lsat_1_v5_gn_9_118960 Lactuca sativa HOM05D003347 ORTHO05D003821 3.4e-17 93.2 159 71.7
Dinv24283 Davidia involucrata HOM05D003347 ORTHO05D003821 4.4e-17 92.8 235 59.1
TWI31G0129 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 4.4e-17 92.8 208 48.6
Zm00001eb113690 Zea mays HOM05D003347 ORTHO05D003821 9.8e-17 91.7 183 56.8
Cfa005522 Carpinus fangiana HOM05D003347 ORTHO05D003821 1.7e-16 90.9 236 61.0
QL11p018508 Quercus lobata HOM05D003347 ORTHO05D003821 2.9e-16 90.1 158 72.8
CAN.G1577.23 Capsicum annuum HOM05D003347 ORTHO05D003821 1.9e-15 87.4 308 46.8
FAN25G2408 Fragaria x ananassa HOM05D003347 ORTHO05D003821 3.2e-15 86.7 303 58.4
Aqoxy6G00189 Aquilegia oxysepala HOM05D003347 ORTHO05D003821 9.2e-15 85.1 279 55.6
Phvul.009G151400 Phaseolus vulgaris HOM05D003347 ORTHO05D003821 9.2e-15 85.1 150 74.7
QL10p039663 Quercus lobata HOM05D003347 ORTHO05D003821 9.2e-15 85.1 73 63.0
MD08G1229400 Malus domestica HOM05D003347 ORTHO05D003821 1.6e-14 84.3 133 80.5
Oeu033124.1 Olea europaea HOM05D002729 ORTHO05D003163 1.6e-14 84.3 191 59.2
SGA_v2.0_scaffold1G00306 Striga asiatica HOM05D003347 ORTHO05D003821 2.7e-14 83.6 135 77.0
COL.COLO4_12116 Corchorus olitorius HOM05D012218 ORTHO05D003821 1.0e-13 81.6 157 61.8
CiPaw.03G114900 Carya illinoinensis HOM05D003347 ORTHO05D003821 1.3e-13 81.3 138 69.6
A06p07670 Brassica napus HOM05D003347 ORTHO05D003821 2.3e-13 80.5 243 47.3
Glyma.06G158900 Glycine max HOM05D003347 ORTHO05D003821 2.3e-13 80.5 150 58.0
Lalb_Chr11g0068781 Lupinus albus HOM05D003347 ORTHO05D003821 3.0e-13 80.1 146 71.9
Atru.chr4.1125 Acer truncatum HOM05D003347 ORTHO05D003821 3.9e-13 79.7 196 51.5
Actinidia26147 Actinidia chinensis HOM05D003347 ORTHO05D003821 3.9e-13 79.7 133 55.6
Ca_00076_v3 Cicer arietinum L. HOM05D005880 ORTHO05D007114 3.9e-13 79.7 133 78.9
Cfa002207 Carpinus fangiana HOM05D003347 ORTHO05D003821 5.0e-13 79.3 148 37.8
CSS0043936 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 6.6e-13 79.0 195 49.2
BcaC05g24971 Brassica carinata HOM05D003347 ORTHO05D003821 8.6e-13 78.6 167 57.5
BraA06t23968Z Brassica rapa HOM05D003347 ORTHO05D003821 1.1e-12 78.2 167 55.1
TWI59G0889 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 2.5e-12 77.0 184 67.9
ECA236G0662 Erigeron canadensis HOM05D003347 ORTHO05D003821 5.6e-12 75.9 297 50.2
TPR.G28695 Trifolium pratense HOM05D003347 ORTHO05D003821 5.6e-12 75.9 148 62.2
Lj1g0014274 Lotus japonicus HOM05D003347 ORTHO05D003821 9.5e-12 75.1 72 59.7
CARHR051920 Cardamine hirsuta HOM05D003347 ORTHO05D003821 1.2e-11 74.7 158 57.0
PGR102G0439 Punica granatum HOM05D003347 ORTHO05D003821 1.2e-11 74.7 271 51.7
FAN16G0856 Fragaria x ananassa HOM05D003347 ORTHO05D003821 2.1e-11 73.9 307 50.2
RcHm_v2.0_Chr5g0049401 Rosa chinensis HOM05D003347 ORTHO05D003821 2.1e-11 73.9 118 85.6
Solyc01g104160.4 Solanum lycopersicum HOM05D003347 ORTHO05D003821 2.1e-11 73.9 133 75.2
vmacro01761 Vaccinium macrocarpon HOM05D003347 ORTHO05D003821 2.1e-11 73.9 70 57.1
Gorai.006G007100 Gossypium raimondii HOM05D003347 ORTHO05D003821 2.8e-11 73.6 156 58.3
Cc02_g22510 Coffea canephora HOM05D003347 ORTHO05D003821 3.6e-11 73.2 159 56.0
Gohir.A09G006400 Gossypium hirsutum HOM05D003347 ORTHO05D003821 3.6e-11 73.2 156 57.1
Thecc.01G142300 Theobroma cacao HOM05D003347 ORTHO05D003821 3.6e-11 73.2 131 58.0
C05p09260 Brassica napus HOM05D003347 ORTHO05D003821 4.7e-11 72.8 167 55.1
Thhalv10008376m.g Eutrema salsugineum HOM05D003347 ORTHO05D003821 4.7e-11 72.8 241 56.4
BolC5t29665H Brassica oleracea HOM05D003347 ORTHO05D003821 6.2e-11 72.4 243 46.5
Hma1.2p1_0930F.1_g238020 Hydrangea macrophylla HOM05D003347 ORTHO05D003821 6.2e-11 72.4 180 52.8
Hund12985 Selenicereus undatus HOM05D003347 ORTHO05D003821 6.2e-11 72.4 189 51.3
Cpa.g.sc37.62 Carica papaya HOM05D003347 ORTHO05D003821 8.0e-11 72.0 70 52.9
Solyc05g056460.4 Solanum lycopersicum HOM05D003347 ORTHO05D003821 1.1e-10 71.6 189 51.9
EL10Ac6g14071 Beta vulgaris HOM05D003347 ORTHO05D003821 1.4e-10 71.2 278 52.2
HanXRQChr01g0017031 Helianthus annuus HOM05D003347 ORTHO05D003821 1.8e-10 70.9 69 55.1
MD08G1229300 Malus domestica HOM05D003347 ORTHO05D003821 1.8e-10 70.9 55 74.5
Dinv19368 Davidia involucrata HOM05D003347 ORTHO05D003821 2.3e-10 70.5 280 56.1
Gohir.D09G005500 Gossypium hirsutum HOM05D003347 ORTHO05D003821 3.1e-10 70.1 131 64.1
MD15G1137800 Malus domestica HOM05D003347 ORTHO05D003821 4.0e-10 69.7 125 65.6
VMungo1309G3119 Vigna mungo HOM05D003347 ORTHO05D003821 4.0e-10 69.7 150 66.7
Peaxi162Scf00152g01328 Petunia axillaris HOM05D003347 ORTHO05D003821 5.2e-10 69.3 147 64.6
Rhsim10G0131200 Rhododendron simsii HOM05D003347 ORTHO05D003821 6.8e-10 68.9 277 55.6
MSTRG.23472 Avicennia marina HOM05D003347 ORTHO05D003821 8.9e-10 68.6 199 51.8
Nitab4.5_0003344g0020 Nicotiana tabacum HOM05D003347 ORTHO05D003821 8.9e-10 68.6 133 71.4
SMO163G0068 Selaginella moellendorffii HOM05D003347 ORTHO05D003821 1.2e-09 68.2 158 47.5
Potri.019G001900 Populus trichocarpa HOM05D003347 ORTHO05D003821 1.5e-09 67.8 156 50.6
Hma1.2p1_1197F.1_g266100 Hydrangea macrophylla HOM05D003347 ORTHO05D003821 2.0e-09 67.4 66 54.5
AUR62006920 Chenopodium quinoa HOM05D003347 ORTHO05D003821 3.4e-09 66.6 156 50.0
Eucgr.H05071 Eucalyptus grandis HOM05D003347 ORTHO05D003821 4.4e-09 66.2 128 63.3
FvH4_3g26951 Fragaria vesca HOM05D003347 ORTHO05D003821 4.4e-09 66.2 305 55.1
Sed0017913 Sechium edule HOM05D003347 ORTHO05D003821 4.4e-09 66.2 73 52.1
Lj4A831G75 Lonicera japonica HOM05D003347 ORTHO05D003821 5.8e-09 65.9 59 59.3
DCAR_029250 Daucus carota HOM05D003347 ORTHO05D003821 9.8e-09 65.1 238 62.2
Carub.0001s1045 Capsella rubella HOM05D003347 ORTHO05D003821 2.2e-08 63.9 163 55.8
Psat5g058160 Pisum sativum HOM05D003347 ORTHO05D003821 2.9e-08 63.5 69 47.8
PGSC0003DMG400023323 Solanum tuberosum HOM05D003347 ORTHO05D003821 2.9e-08 63.5 189 49.7
vmacro12779 Vaccinium macrocarpon HOM05D003347 ORTHO05D003821 3.7e-08 63.2 108 61.1
Aa31LG1G3970 Aethionema arabicum HOM05D003347 ORTHO05D003821 4.9e-08 62.8 134 58.2
FAN21G3803 Fragaria x ananassa HOM05D003347 ORTHO05D003821 6.4e-08 62.4 209 58.9
Pp3c15_6590 Physcomitrium patens HOM05D003347 ORTHO05D003821 6.4e-08 62.4 159 61.6
Potri.001G306100 Populus trichocarpa HOM05D003347 ORTHO05D003821 1.4e-07 61.2 152 67.1
Cpa.g.sc113.60 Carica papaya HOM05D003347 ORTHO05D003821 2.4e-07 60.5 236 55.5
CiPaw.06G147300 Carya illinoinensis HOM05D003347 ORTHO05D003821 3.2e-07 60.1 183 55.7
Peaxi162Scf00011g00421 Petunia axillaris HOM05D003347 ORTHO05D003821 3.2e-07 60.1 156 59.0
Psat5g058080 Pisum sativum HOM05D003347 ORTHO05D003821 7.1e-07 58.9 68 47.1
Thhalv10014512m.g Eutrema salsugineum HOM05D012923 ORTHO05D014747 9.2e-07 58.5 155 41.3
RcHm_v2.0_Chr2g0123211 Rosa chinensis HOM05D003347 ORTHO05D003821 9.2e-07 58.5 152 53.9
TWI23G0580 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 9.2e-07 58.5 117 78.6
arahy.Tifrunner.gnm1.ann1.X7GISI Arachis hypogaea HOM05D003347 ORTHO05D003821 2.1e-06 57.4 73 47.9
Os10g0214400 Oryza sativa ssp. japonica HOM05D003347 ORTHO05D003821 2.1e-06 57.4 181 43.1
FAN11G2552 Fragaria x ananassa HOM05D003347 ORTHO05D003821 2.7e-06 57.0 306 53.3
unitig_60.g25508 Utricularia gibba HOM05D003347 ORTHO05D003821 3.5e-06 56.6 69 47.8
EL10Ac4g09689 Beta vulgaris HOM05D003347 ORTHO05D003821 4.6e-06 56.2 341 36.7
SGA_v2.0_scaffold189G40392 Striga asiatica HOM05D000087 ORTHO05D000793 4.6e-06 56.2 75 50.7
Nitab4.5_0000816g0010 Nicotiana tabacum HOM05D003347 ORTHO05D003821 6.0e-06 55.8 163 52.8
Sc09g0002030 Simmondsia chinensis HOM05D003347 ORTHO05D003821 7.8e-06 55.5 69 46.4


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