Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_6G037210 Cucumis sativus L. HOM05D000358 ORTHO05D009346 4.8e-91 337.8 169 100.0
Sed0015724 Sechium edule HOM05D000358 ORTHO05D009346 8.8e-61 237.3 175 72.6
ClCG07G000330 Citrullus lanatus HOM05D000358 ORTHO05D009346 1.6e-54 216.5 155 73.5
TAR375G0394 Trochodendron aralioides HOM05D000358 ORTHO05D009346 2.4e-50 202.6 172 61.0
Dinv32921 Davidia involucrata HOM05D000358 ORTHO05D002525 3.1e-50 202.2 162 61.7
TAR636G2394 Trochodendron aralioides HOM05D000358 ORTHO05D009346 1.0e-48 197.2 172 59.9
CSS0040373 Camellia sinensis var. sinensis HOM05D000358 ORTHO05D009346 3.8e-48 195.3 159 61.0
CiPaw.07G090600 Carya illinoinensis HOM05D000358 ORTHO05D009346 3.2e-47 192.2 157 61.1
Sabra05G0160900 Salix brachista HOM05D000358 ORTHO05D009346 7.2e-47 191.0 133 66.2
CANSAT25G1780 Cannabis sativa HOM05D000358 ORTHO05D009346 9.4e-47 190.7 165 58.2
Manes.05G077400 Manihot esculenta HOM05D000358 ORTHO05D009346 9.4e-47 190.7 151 59.6
RcHm_v2.0_Chr6g0290831 Rosa chinensis HOM05D000358 ORTHO05D009346 2.1e-46 189.5 170 57.6
FvH4_2g23371 Fragaria vesca HOM05D000358 ORTHO05D009346 3.6e-46 188.7 171 57.3
MBI04_g20822_MAGBIO Magnolia biondii HOM05D000358 ORTHO05D009346 3.0e-45 185.7 170 55.9
Gorai.007G137700 Gossypium raimondii HOM05D000358 ORTHO05D009346 4.0e-45 185.3 174 57.5
Prupe.8G239600 Prunus persica HOM05D000358 ORTHO05D009346 5.2e-45 184.9 163 58.9
Gohir.D11G128700 Gossypium hirsutum HOM05D000358 ORTHO05D009346 8.8e-45 184.1 163 60.1
Atru.chr5.1460 Acer truncatum HOM05D000358 ORTHO05D009346 1.5e-44 183.3 127 65.4
Ciclev10022514m.g Citrus clementina HOM05D000358 ORTHO05D009346 1.5e-44 183.3 150 60.7
MD11G1284000 Malus domestica HOM05D000358 ORTHO05D009346 1.5e-44 183.3 168 56.0
Gohir.A11G123500 Gossypium hirsutum HOM05D000358 ORTHO05D009346 2.6e-44 182.6 174 56.9
TWI14G1410 Tripterygium wilfordii HOM05D000358 ORTHO05D009346 2.6e-44 182.6 128 65.6
Thecc.01G276900 Theobroma cacao HOM05D000358 ORTHO05D009346 1.7e-43 179.9 137 62.8
GSVIVG01001163001 Vitis vinifera HOM05D000358 ORTHO05D009346 1.7e-43 179.9 158 57.0
Lj1A47T39 Lonicera japonica HOM05D000358 ORTHO05D009346 4.8e-43 178.3 168 56.0
Phvul.001G152500 Phaseolus vulgaris HOM05D000358 ORTHO05D009346 6.3e-43 177.9 159 54.7
Rhsim13G0026100 Rhododendron simsii HOM05D000358 ORTHO05D009346 1.1e-42 177.2 106 74.5
PSO761G0166 Papaver somniferum HOM05D000358 ORTHO05D009346 1.4e-42 176.8 172 55.2
Duzib133G0337 Durio zibethinus HOM05D000358 ORTHO05D009346 1.8e-42 176.4 168 56.5
Cpa.g.sc52.51 Carica papaya HOM05D000358 ORTHO05D009346 4.1e-42 175.3 127 63.0
Glyma.03G155200 Glycine max HOM05D000358 ORTHO05D009346 4.1e-42 175.3 143 59.4
Peaxi162Scf00641g00315 Petunia axillaris HOM05D000358 ORTHO05D009346 4.1e-42 175.3 151 58.3
ECA247G2961 Erigeron canadensis HOM05D000358 ORTHO05D009346 7.0e-42 174.5 132 62.1
PGR044G2401 Punica granatum HOM05D000358 ORTHO05D009346 7.0e-42 174.5 120 68.3
MSTRG.12558 Avicennia marina HOM05D000358 ORTHO05D009346 9.1e-42 174.1 138 60.1
PSO210G0760 Papaver somniferum HOM05D000358 ORTHO05D009346 9.1e-42 174.1 172 54.1
Aqoxy2G03373 Aquilegia oxysepala HOM05D000358 ORTHO05D009346 1.6e-41 173.3 169 52.1
Nitab4.5_0004318g0030 Nicotiana tabacum HOM05D000358 ORTHO05D009346 1.6e-41 173.3 167 55.7
Hund09500 Selenicereus undatus HOM05D000358 ORTHO05D009346 3.5e-41 172.2 161 53.4
Potri.005G210700 Populus trichocarpa HOM05D000358 ORTHO05D009346 7.7e-41 171.0 152 57.2
Eucgr.K03368 Eucalyptus grandis HOM05D000358 ORTHO05D009346 1.0e-40 170.6 167 54.5
BolC9t53153H Brassica oleracea HOM05D000358 ORTHO05D009346 1.3e-40 170.2 158 53.8
Nitab4.5_0005971g0010 Nicotiana tabacum HOM05D000358 ORTHO05D009346 1.3e-40 170.2 150 58.0
BcaC04g24011 Brassica carinata HOM05D000358 ORTHO05D009346 1.7e-40 169.9 158 53.8
Sopen09g027050 Solanum pennellii HOM05D000358 ORTHO05D009346 6.6e-40 167.9 150 57.3
THA.LOC104801239 Tarenaya hassleriana HOM05D000358 ORTHO05D009346 8.6e-40 167.5 159 52.8
SalBow6G4489 Salvia bowleyana HOM05D000358 ORTHO05D009346 1.1e-39 167.2 138 59.4
Actinidia09124 Actinidia chinensis HOM05D000358 ORTHO05D009346 1.5e-39 166.8 106 68.9
SGA_v2.0_scaffold81G26022 Striga asiatica HOM05D000358 ORTHO05D009346 1.9e-39 166.4 160 54.4
AUR62028609 Chenopodium quinoa HOM05D000358 ORTHO05D009346 2.5e-39 166.0 152 56.6
Cc01_g19380 Coffea canephora HOM05D000358 ORTHO05D009346 2.5e-39 166.0 113 65.5
Thhalv10029025m.g Eutrema salsugineum HOM05D000358 ORTHO05D009346 2.5e-39 166.0 159 50.3
Lsat_1_v5_gn_9_3480 Lactuca sativa HOM05D000358 ORTHO05D009346 2.5e-39 166.0 107 69.2
Carub.0006s3438 Capsella rubella HOM05D000358 ORTHO05D009346 4.2e-39 165.2 161 52.8
BcaC03g16171 Brassica carinata HOM05D000358 ORTHO05D009346 5.5e-39 164.9 152 53.3
C02p39090 Brassica napus HOM05D000358 ORTHO05D009346 5.5e-39 164.9 152 53.3
BolC2t09919H Brassica oleracea HOM05D000358 ORTHO05D009346 5.5e-39 164.9 152 53.3
AL6G50280 Arabidopsis lyrata HOM05D000358 ORTHO05D009346 7.2e-39 164.5 161 52.2
CARHR251060 Cardamine hirsuta HOM05D000358 ORTHO05D009346 7.2e-39 164.5 163 54.6
Migut.N02045 Erythranthe guttata HOM05D000358 ORTHO05D009346 7.2e-39 164.5 123 62.6
AT4G02725 Arabidopsis thaliana HOM05D000358 ORTHO05D009346 9.5e-39 164.1 155 52.9
A02p24950 Brassica napus HOM05D000358 ORTHO05D009346 9.5e-39 164.1 152 53.3
BraA02t07485Z Brassica rapa HOM05D000358 ORTHO05D009346 9.5e-39 164.1 152 53.3
MELO3C014393.2 Cucumis melo HOM05D000358 ORTHO05D009346 9.5e-39 164.1 94 86.2
Sp6g02670 Schrenkiella parvula HOM05D000358 ORTHO05D009346 9.5e-39 164.1 169 51.5
EL10Ac5g10557 Beta vulgaris HOM05D000358 ORTHO05D009346 1.2e-38 163.7 164 52.4
BcaB05g23661 Brassica carinata HOM05D000358 ORTHO05D009346 2.1e-38 162.9 158 51.3
A09p02150 Brassica napus HOM05D000358 ORTHO05D009346 2.1e-38 162.9 156 51.9
BraA09t35864Z Brassica rapa HOM05D000358 ORTHO05D009346 2.1e-38 162.9 158 51.3
Lj1g0011093 Lotus japonicus HOM05D000358 ORTHO05D009346 2.1e-38 162.9 128 61.7
Zm00001eb054110 Zea mays HOM05D000358 ORTHO05D009346 2.1e-38 162.9 115 66.1
HanXRQChr15g0466741 Helianthus annuus HOM05D000358 ORTHO05D009346 1.0e-37 160.6 180 50.6
Medtr7g095090 Medicago truncatula HOM05D000358 ORTHO05D009346 2.3e-37 159.5 158 54.4
arahy.Tifrunner.gnm1.ann1.1D6AAZ Arachis hypogaea HOM05D000358 ORTHO05D009346 6.8e-37 157.9 115 64.3
arahy.Tifrunner.gnm1.ann1.M7C8NM Arachis hypogaea HOM05D000358 ORTHO05D009346 6.8e-37 157.9 115 64.3
TPR.G35683 Trifolium pratense HOM05D000358 ORTHO05D009346 9.8e-36 154.1 165 52.7
Solyc09g065300.4 Solanum lycopersicum HOM05D000358 ORTHO05D009346 2.8e-35 152.5 181 48.1
vmacro02584 Vaccinium macrocarpon HOM05D000358 ORTHO05D009346 3.7e-35 152.1 156 51.9
COL.COLO4_09074 Corchorus olitorius HOM05D000358 ORTHO05D009346 6.3e-35 151.4 185 50.3
Os03g0701300 Oryza sativa ssp. japonica HOM05D000358 ORTHO05D009346 6.3e-35 151.4 100 68.0
C09p02250 Brassica napus HOM05D000358 ORTHO05D009346 5.4e-34 148.3 182 45.1
HPP92_009591 Vanilla planifolia HOM05D002842 ORTHO05D003177 2.0e-33 146.4 155 48.4
Aa31LG5G2370 Aethionema arabicum HOM05D000358 ORTHO05D009346 2.3e-32 142.9 156 48.1
VMungo1383G1528 Vigna mungo HOM05D000358 ORTHO05D009346 2.9e-32 142.5 197 44.7
Lalb_Chr01g0020121 Lupinus albus HOM05D000358 ORTHO05D009346 2.5e-31 139.4 132 55.3
Hma1.2p1_0822F.1_g224410 Hydrangea macrophylla HOM05D000358 ORTHO05D009346 4.3e-31 138.7 94 68.1
Mapoly0004s0031 Marchantia polymorpha HOM05D000358 ORTHO05D009346 7.3e-31 137.9 137 53.3
Hma1.2p1_0822F.1_g224420 Hydrangea macrophylla HOM05D000358 ORTHO05D009346 1.4e-29 133.7 87 71.3
CDE02G2742 Ceratophyllum demersum HOM05D006420 ORTHO05D008009 5.2e-29 131.7 106 59.4
PGSC0003DMG400019331 Solanum tuberosum HOM05D000358 ORTHO05D009346 6.8e-29 131.3 121 57.0
Pp3c26_14500 Physcomitrium patens HOM05D000358 ORTHO05D009346 8.9e-29 131.0 154 42.2
SMO180G0003 Selaginella moellendorffii HOM05D000358 ORTHO05D009346 1.5e-28 130.2 94 61.7
SMO340G0322 Selaginella moellendorffii HOM05D000104 ORTHO05D004059 1.5e-28 130.2 94 61.7
ATR0332G065 Amborella trichopoda HOM05D000358 ORTHO05D009346 3.4e-28 129.0 98 59.2
Atru.BG.13.p Acer truncatum HOM05D000358 ORTHO05D009346 4.9e-27 125.2 99 58.6
Sc17g0001440 Simmondsia chinensis HOM05D000358 ORTHO05D009346 8.3e-27 124.4 102 60.8
Haze_04693 Corylus avellana HOM05D000358 ORTHO05D009346 5.4e-26 121.7 144 50.7
Psat3g063840 Pisum sativum HOM05D000358 ORTHO05D009346 6.0e-25 118.2 137 54.0
unitig_899.g15068 Utricularia gibba HOM05D000454 ORTHO05D000591 1.1e-21 107.5 75 65.3
Eucgr.L00778 Eucalyptus grandis HOM05D000358 ORTHO05D009346 1.2e-20 104.0 69 66.7
AagrBONN_evm.TU.Sc2ySwM_362.2722 Anthoceros agrestis HOM05D000358 ORTHO05D009346 1.1e-18 97.4 87 51.7
QL12p021343 Quercus lobata HOM05D000358 ORTHO05D009346 9.5e-15 84.3 100 51.0
Eucgr.C01960 Eucalyptus grandis HOM05D000358 ORTHO05D009346 1.1e-13 80.9 59 61.0
Ah.11g050550 Amaranthus hybridus HOM05D000358 ORTHO05D009346 7.5e-12 74.7 171 35.1
FAN20G1711 Fragaria x ananassa HOM05D000358 ORTHO05D009346 3.7e-11 72.4 171 32.7
Nn1g02275 Nelumbo nucifera HOM05D000358 ORTHO05D009346 4.1e-10 68.9 128 40.6
Oeu029468.1 Olea europaea HOM05D000358 ORTHO05D009346 2.7e-09 66.2 100 43.0


User provided reference genes

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