Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_6G033900 Cucumis sativus L. HOM05D004085 ORTHO05D005189 5.9e-191 670.6 318 100.0
MELO3C011402.2 Cucumis melo HOM05D004085 ORTHO05D005189 4.3e-186 654.4 318 98.1
ClCG08G010600 Citrullus lanatus HOM05D004085 ORTHO05D005189 8.5e-182 640.2 318 95.0
Sed0007813 Sechium edule HOM05D004085 ORTHO05D005189 2.1e-172 609.0 322 90.7
Manes.05G115200 Manihot esculenta HOM05D004085 ORTHO05D005189 7.5e-154 547.4 318 78.9
Duzib251G0046 Durio zibethinus HOM05D004085 ORTHO05D005189 2.8e-153 545.4 317 80.1
Phvul.003G280600 Phaseolus vulgaris HOM05D004085 ORTHO05D005189 6.3e-153 544.3 319 79.3
CANSAT64G3016 Cannabis sativa HOM05D004085 ORTHO05D005189 1.1e-152 543.5 318 79.9
Ciclev10032152m.g Citrus clementina HOM05D004085 ORTHO05D005189 1.1e-152 543.5 317 80.1
Gohir.A03G106500 Gossypium hirsutum HOM05D004085 ORTHO05D005189 2.7e-151 538.9 320 79.1
Thecc.02G322800 Theobroma cacao HOM05D004085 ORTHO05D005189 2.7e-151 538.9 317 79.2
MD16G1055900 Malus domestica HOM05D004085 ORTHO05D005189 1.3e-150 536.6 324 79.6
CiPaw.05G122000 Carya illinoinensis HOM05D004085 ORTHO05D005189 2.9e-150 535.4 317 79.8
Nn4g23533 Nelumbo nucifera HOM05D004085 ORTHO05D005189 2.9e-150 535.4 316 76.9
Prupe.1G293400 Prunus persica HOM05D004085 ORTHO05D005189 2.9e-150 535.4 321 79.4
Atru.chr11.1559 Acer truncatum HOM05D004085 ORTHO05D005189 1.1e-149 533.5 316 77.8
Gorai.005G147600 Gossypium raimondii HOM05D004085 ORTHO05D005189 1.5e-149 533.1 320 78.4
Lj4g0023791 Lotus japonicus HOM05D004085 ORTHO05D005189 1.9e-149 532.7 319 78.7
Gohir.D02G131700 Gossypium hirsutum HOM05D004085 ORTHO05D005189 4.2e-149 531.6 320 78.1
TWI75G0426 Tripterygium wilfordii HOM05D004085 ORTHO05D005189 4.2e-149 531.6 318 78.3
Lalb_Chr20g0117031 Lupinus albus HOM05D004085 ORTHO05D005189 5.5e-149 531.2 315 79.4
Glyma.05G183800 Glycine max HOM05D004085 ORTHO05D005189 2.1e-148 529.3 319 76.8
Haze_11859 Corylus avellana HOM05D004085 ORTHO05D005189 1.0e-147 526.9 372 70.7
Dinv34021 Davidia involucrata HOM05D004085 ORTHO05D005189 1.0e-147 526.9 318 76.7
arahy.Tifrunner.gnm1.ann1.34XV9Z Arachis hypogaea HOM05D004085 ORTHO05D005189 1.4e-147 526.6 319 77.4
MD13G1056600 Malus domestica HOM05D004085 ORTHO05D005189 1.8e-147 526.2 324 79.0
Medtr8g066120 Medicago truncatula HOM05D004085 ORTHO05D005189 1.8e-147 526.2 319 77.4
THA.LOC104805212 Tarenaya hassleriana HOM05D004085 ORTHO05D005189 4.0e-147 525.0 319 76.8
Cfa008850 Carpinus fangiana HOM05D004085 ORTHO05D005189 8.9e-147 523.9 304 82.2
PGR102G0161 Punica granatum HOM05D004085 ORTHO05D005189 2.2e-145 519.2 318 77.0
Psat4g122760 Pisum sativum HOM05D004085 ORTHO05D005189 2.8e-145 518.8 319 75.9
Ca_22870_v3 Cicer arietinum L. HOM05D004085 ORTHO05D005189 4.9e-145 518.1 321 76.3
Psat4g118760 Pisum sativum HOM05D004085 ORTHO05D005189 6.3e-145 517.7 319 75.5
Eucgr.J01102 Eucalyptus grandis HOM05D004085 ORTHO05D005189 1.4e-144 516.5 316 76.6
VMungo0251G3520 Vigna mungo HOM05D004085 ORTHO05D005189 1.8e-144 516.2 341 72.4
Cpa.g.sc1.168 Carica papaya HOM05D004085 ORTHO05D005189 2.4e-144 515.8 318 75.5
Aqoxy3G03746 Aquilegia oxysepala HOM05D004085 ORTHO05D005189 3.1e-144 515.4 316 75.3
GSVIVG01008152001 Vitis vinifera HOM05D004085 ORTHO05D005189 5.4e-144 514.6 318 75.5
Migut.D01616 Erythranthe guttata HOM05D004085 ORTHO05D005189 1.6e-143 513.1 316 72.5
CSS0028863 Camellia sinensis var. sinensis HOM05D004085 ORTHO05D005189 2.7e-143 512.3 316 76.3
TAR629G1999 Trochodendron aralioides HOM05D004085 ORTHO05D005189 5.9e-143 511.1 316 75.3
AL5G13590 Arabidopsis lyrata HOM05D004085 ORTHO05D005189 7.8e-143 510.8 317 75.7
Actinidia07768 Actinidia chinensis HOM05D004085 ORTHO05D005189 6.6e-142 507.7 321 74.5
DCAR_007209 Daucus carota HOM05D004085 ORTHO05D005189 8.6e-142 507.3 316 74.7
Lalb_Chr15g0084991 Lupinus albus HOM05D004085 ORTHO05D005189 8.6e-142 507.3 317 74.8
Carub.0005s0294 Capsella rubella HOM05D004085 ORTHO05D005189 1.5e-141 506.5 317 75.4
AL3G42500 Arabidopsis lyrata HOM05D004085 ORTHO05D005189 5.6e-141 504.6 316 75.3
Lj3A1027G87 Lonicera japonica HOM05D004085 ORTHO05D005189 9.5e-141 503.8 368 65.8
BcaC06g31165 Brassica carinata HOM05D004085 ORTHO05D005189 2.1e-140 502.7 317 75.4
vmacro10475 Vaccinium macrocarpon HOM05D004085 ORTHO05D005189 2.1e-140 502.7 316 74.4
Hma1.2p1_0428F.1_g150850 Hydrangea macrophylla HOM05D004085 ORTHO05D005189 2.8e-140 502.3 318 73.9
AT2G03800 Arabidopsis thaliana HOM05D004085 ORTHO05D005189 6.1e-140 501.1 317 74.1
Rhsim09G0122200 Rhododendron simsii HOM05D004085 ORTHO05D005189 6.1e-140 501.1 316 74.1
Sopen04g001280 Solanum pennellii HOM05D004085 ORTHO05D005189 1.4e-139 500.0 317 72.6
PGSC0003DMG400001937 Solanum tuberosum HOM05D004085 ORTHO05D005189 1.4e-139 500.0 317 72.6
PSO063G3410 Papaver somniferum HOM05D004085 ORTHO05D005189 3.0e-139 498.8 317 73.2
Hma1.2p1_0595F.1_g186285 Hydrangea macrophylla HOM05D004085 ORTHO05D005189 4.0e-139 498.4 316 73.7
Nitab4.5_0001071g0010 Nicotiana tabacum HOM05D004085 ORTHO05D005189 6.8e-139 497.7 317 72.2
Sc14g0007770 Simmondsia chinensis HOM05D004085 ORTHO05D005189 6.8e-139 497.7 317 73.8
BcaC06g31143 Brassica carinata HOM05D004085 ORTHO05D005189 8.9e-139 497.3 317 74.1
Nitab4.5_0002863g0020 Nicotiana tabacum HOM05D004085 ORTHO05D005189 1.5e-138 496.5 318 71.1
PSO409G0049 Papaver somniferum HOM05D004085 ORTHO05D005189 1.5e-138 496.5 317 72.9
Sp2g14620 Schrenkiella parvula HOM05D004085 ORTHO05D005189 2.0e-138 496.1 317 73.8
A06p42850 Brassica napus HOM05D004085 ORTHO05D005189 2.6e-138 495.7 317 74.1
C07p34240 Brassica napus HOM05D004085 ORTHO05D005189 2.6e-138 495.7 317 73.8
BolC7t43952H Brassica oleracea HOM05D004085 ORTHO05D005189 2.6e-138 495.7 317 73.8
Dinv07974 Davidia involucrata HOM05D004085 ORTHO05D005189 3.4e-138 495.4 320 73.8
BraA06t27197Z Brassica rapa HOM05D004085 ORTHO05D005189 5.8e-138 494.6 317 74.1
HanXRQChr12g0365061 Helianthus annuus HOM05D004085 ORTHO05D005189 5.8e-138 494.6 318 72.6
Aa31LG2G6920 Aethionema arabicum HOM05D004085 ORTHO05D005189 1.3e-137 493.4 332 69.6
Peaxi162Scf00873g00113 Petunia axillaris HOM05D004085 ORTHO05D005189 1.3e-137 493.4 321 71.0
BcaC03g17242 Brassica carinata HOM05D004085 ORTHO05D005189 2.2e-137 492.7 317 73.5
CARHR146210 Cardamine hirsuta HOM05D004085 ORTHO05D005189 2.2e-137 492.7 317 73.8
BolC2t11263H Brassica oleracea HOM05D004085 ORTHO05D005189 6.4e-137 491.1 317 73.2
Thhalv10004640m.g Eutrema salsugineum HOM05D004085 ORTHO05D005189 1.1e-136 490.3 317 73.2
Cc11_g11560 Coffea canephora HOM05D004085 ORTHO05D005189 1.4e-136 490.0 320 70.9
ECA233G2807 Erigeron canadensis HOM05D004085 ORTHO05D005189 1.8e-136 489.6 318 72.3
RcHm_v2.0_Chr4g0437351 Rosa chinensis HOM05D004085 ORTHO05D005189 1.8e-136 489.6 320 72.8
PGSC0003DMG402004079 Solanum tuberosum HOM05D004085 ORTHO05D005189 2.4e-136 489.2 316 70.9
A02p33630 Brassica napus HOM05D004085 ORTHO05D005189 3.2e-136 488.8 317 72.9
CAN.G587.59 Capsicum annuum HOM05D004085 ORTHO05D005189 3.2e-136 488.8 318 70.4
DCAR_011575 Daucus carota HOM05D004085 ORTHO05D005189 5.4e-136 488.0 317 70.0
FAN22G1834 Fragaria x ananassa HOM05D004085 ORTHO05D005189 5.4e-136 488.0 318 73.3
Solyc06g069390.4 Solanum lycopersicum HOM05D004085 ORTHO05D005189 9.2e-136 487.3 316 70.6
Sopen06g026660 Solanum pennellii HOM05D004085 ORTHO05D005189 9.2e-136 487.3 316 70.3
Ah.03g138610 Amaranthus hybridus HOM05D004085 ORTHO05D005189 1.2e-135 486.9 316 71.5
ATR0691G189 Amborella trichopoda HOM05D004085 ORTHO05D005189 1.2e-135 486.9 318 71.1
Nitab4.5_0000591g0050 Nicotiana tabacum HOM05D004085 ORTHO05D005189 1.2e-135 486.9 314 71.3
C02p51780 Brassica napus HOM05D004085 ORTHO05D005189 1.6e-135 486.5 317 72.6
BcaB07g30279 Brassica carinata HOM05D004085 ORTHO05D005189 2.0e-135 486.1 317 72.9
FAN12G2772 Fragaria x ananassa HOM05D004085 ORTHO05D005189 3.5e-135 485.3 318 73.0
HanXRQChr05g0157451 Helianthus annuus HOM05D004085 ORTHO05D005189 7.8e-135 484.2 316 71.2
Duzib248G1362 Durio zibethinus HOM05D004085 ORTHO05D005189 1.5e-133 479.9 317 73.2
Gohir.D11G037500 Gossypium hirsutum HOM05D004085 ORTHO05D005189 1.5e-133 479.9 316 69.0
Gorai.007G040300 Gossypium raimondii HOM05D004085 ORTHO05D005189 1.5e-133 479.9 316 69.0
MSTRG.779 Avicennia marina HOM05D004085 ORTHO05D005189 5.6e-133 478.0 319 71.5
PGR044G1995 Punica granatum HOM05D004085 ORTHO05D005189 9.5e-133 477.2 323 68.1
CSS0006421 Camellia sinensis var. sinensis HOM05D004085 ORTHO05D005189 2.8e-132 475.7 316 71.5
Potri.015G048700 Populus trichocarpa HOM05D004085 ORTHO05D005189 3.6e-132 475.3 316 69.9
Os08g0339200 Oryza sativa ssp. japonica HOM05D004085 ORTHO05D005189 6.2e-132 474.6 321 72.0
Sabra15G0078600 Salix brachista HOM05D004085 ORTHO05D005189 3.1e-131 472.2 316 70.3
MSTRG.7728 Avicennia marina HOM05D004085 ORTHO05D005189 1.2e-130 470.3 318 70.4
Lsat_1_v5_gn_5_23401 Lactuca sativa HOM05D004085 ORTHO05D005189 1.2e-130 470.3 316 69.3
ECA246G2852 Erigeron canadensis HOM05D004085 ORTHO05D005189 1.5e-130 469.9 316 69.0
Hund25155 Selenicereus undatus HOM05D004085 ORTHO05D005189 2.2e-129 466.1 390 59.5
Peaxi162Scf00013g00834 Petunia axillaris HOM05D004085 ORTHO05D005189 2.9e-129 465.7 308 70.1
Nitab4.5_0002449g0030 Nicotiana tabacum HOM05D004085 ORTHO05D005189 6.4e-129 464.5 318 68.2
Lsat_1_v5_gn_8_36601 Lactuca sativa HOM05D004085 ORTHO05D005189 1.4e-128 463.4 318 71.4
Zm00001eb276680 Zea mays HOM05D004085 ORTHO05D005189 1.4e-128 463.4 322 68.9
CDE01G0369 Ceratophyllum demersum HOM05D004085 ORTHO05D005189 2.4e-128 462.6 318 68.2
Manes.06G081100 Manihot esculenta HOM05D004085 ORTHO05D005189 2.4e-128 462.6 319 68.3
SalBow2G2246 Salvia bowleyana HOM05D004085 ORTHO05D005189 2.0e-127 459.5 318 67.6
CSS0016924 Camellia sinensis var. sinensis HOM05D004085 ORTHO05D005189 4.7e-124 448.4 316 68.7
COL.COLO4_27493 Corchorus olitorius HOM05D004085 ORTHO05D005189 1.8e-123 446.4 293 67.6
AUR62007873 Chenopodium quinoa HOM05D004085 ORTHO05D005189 2.0e-122 443.0 316 66.5
FAN07G2517 Fragaria x ananassa HOM05D004085 ORTHO05D005189 3.4e-122 442.2 329 66.0
CSS0030921 Camellia sinensis var. sinensis HOM05D004085 ORTHO05D005189 4.4e-122 441.8 319 67.7
EL10Ac6g14673 Beta vulgaris HOM05D004085 ORTHO05D005189 2.9e-121 439.1 337 63.2
AUR62003058 Chenopodium quinoa HOM05D004085 ORTHO05D005189 6.4e-121 438.0 316 65.2
MBI14_g08107_MAGBIO Magnolia biondii HOM05D004085 ORTHO05D005189 1.2e-119 433.7 268 74.6
SGA_v2.0_scaffold36G14490 Striga asiatica HOM05D004085 ORTHO05D005189 4.6e-119 431.8 318 66.0
HPP92_003714 Vanilla planifolia HOM05D004085 ORTHO05D005189 2.3e-118 429.5 290 70.7
Mapoly0007s0171 Marchantia polymorpha HOM05D004085 ORTHO05D005189 3.9e-118 428.7 325 63.4
Lj5A137T62 Lonicera japonica HOM05D004085 ORTHO05D005189 2.8e-116 422.5 290 70.3
Gohir.A11G034100 Gossypium hirsutum HOM05D004085 ORTHO05D005189 8.1e-116 421.0 316 62.3
SHI14335 Sapria himalayana HOM05D004085 ORTHO05D005189 2.6e-114 416.0 334 60.8
Migut.L01162 Erythranthe guttata HOM05D004085 ORTHO05D005189 8.4e-113 411.0 280 70.7
Cpa.g.sc3.236 Carica papaya HOM05D004085 ORTHO05D005189 1.2e-111 407.1 337 58.5
COL.COLO4_27802 Corchorus olitorius HOM05D004085 ORTHO05D005189 2.5e-109 399.4 322 63.4
MD16G1055500 Malus domestica HOM05D004085 ORTHO05D005189 5.6e-109 398.3 303 66.7
SMO146G0350 Selaginella moellendorffii HOM05D004085 ORTHO05D005189 2.0e-106 389.8 322 57.8
Pp3c3_10070 Physcomitrium patens HOM05D004085 ORTHO05D005189 2.6e-106 389.4 320 59.7
Pp3c4_31680 Physcomitrium patens HOM05D004085 ORTHO05D005189 7.6e-106 387.9 317 57.4
AagrBONN_evm.TU.Sc2ySwM_344.2928 Anthoceros agrestis HOM05D004085 ORTHO05D005189 1.9e-101 373.2 318 57.2
Eucgr.K02549 Eucalyptus grandis HOM05D004085 ORTHO05D005189 3.6e-100 369.0 318 56.3
BraA02t08382Z Brassica rapa HOM05D004085 ORTHO05D005189 5.3e-99 365.2 226 76.5
Nn3g17533 Nelumbo nucifera HOM05D004085 ORTHO05D005189 5.3e-99 365.2 293 60.8
Oeu045347.1 Olea europaea HOM05D004085 ORTHO05D005189 1.3e-94 350.5 244 68.4
CBR_g34346 Chara braunii HOM05D004085 ORTHO05D005189 2.4e-88 329.7 354 46.6
FvH4_4g29300 Fragaria vesca HOM05D004085 ORTHO05D005189 2.1e-84 316.6 199 73.9
arahy.Tifrunner.gnm1.ann1.A9XC2E Arachis hypogaea HOM05D004085 ORTHO05D005189 6.9e-83 311.6 185 78.9
unitig_22.g6891 Utricularia gibba HOM05D004085 ORTHO05D005189 5.1e-78 295.4 218 62.8
PGSC0003DMG401004079 Solanum tuberosum HOM05D004085 ORTHO05D005189 8.7e-78 294.7 182 74.7
C07p34190 Brassica napus HOM05D004085 ORTHO05D005189 6.7e-70 268.5 187 70.1
CSS0002590 Camellia sinensis var. sinensis HOM05D004085 ORTHO05D005189 2.4e-67 260.0 306 50.7
Os09g0248000 Oryza sativa ssp. japonica HOM05D004085 ORTHO05D005189 2.4e-67 260.0 165 74.5
TPR.G27985 Trifolium pratense HOM05D004085 ORTHO05D005189 9.4e-64 248.1 151 77.5
Oeu045348.1 Olea europaea HOM05D004085 ORTHO05D005189 2.8e-60 236.5 144 76.4
Solyc04g005300.4 Solanum lycopersicum HOM05D004085 ORTHO05D005189 2.0e-53 213.8 141 69.5
MBI10_g36395_MAGBIO Magnolia biondii HOM05D004085 ORTHO05D005189 2.9e-49 199.9 148 60.8
Peaxi162Scf00098g00096 Petunia axillaris HOM05D004085 ORTHO05D005189 7.0e-43 178.7 128 65.6
BolC7t43946H Brassica oleracea HOM05D004085 ORTHO05D005189 2.3e-38 163.7 96 72.9
SEGI_05680 Sequoiadendron giganteum HOM05D004085 ORTHO05D005189 4.4e-37 159.5 111 67.6
HPP92_003722 Vanilla planifolia HOM05D004085 ORTHO05D005189 1.1e-35 154.8 125 60.8
TPR.G3316 Trifolium pratense HOM05D004085 ORTHO05D026373 2.3e-33 147.1 93 74.2
BolC7t43934H Brassica oleracea HOM05D004085 ORTHO05D005189 1.9e-32 144.1 105 69.5
MD05G1127700 Malus domestica HOM05D004085 ORTHO05D005189 3.3e-32 143.3 94 73.4
TPR.G40588 Trifolium pratense HOM05D004085 ORTHO05D005189 1.2e-29 134.8 69 84.1
Lj3C737G8 Lonicera japonica HOM05D004085 ORTHO05D005189 1.7e-28 131.0 75 74.7
Duzib068G1264 Durio zibethinus HOM05D004085 ORTHO05D005189 2.5e-24 117.1 67 74.6
Thecc.03G108100 Theobroma cacao HOM05D004085 ORTHO05D026373 9.5e-24 115.2 86 59.3
Actinidia04797 Actinidia chinensis HOM05D004085 ORTHO05D026373 1.8e-22 110.9 74 68.9
BcaC06g31148 Brassica carinata HOM05D004085 ORTHO05D005189 4.9e-20 102.8 72 69.4
SEGI_34269 Sequoiadendron giganteum HOM05D004085 ORTHO05D005189 3.5e-18 96.7 57 66.7
Lj5A720T31 Lonicera japonica HOM05D004085 ORTHO05D026373 6.0e-18 95.9 156 38.5
Ciclev10024148m.g Citrus clementina HOM05D004085 ORTHO05D043374 3.7e-12 76.6 42 81.0
CANSAT64G2585 Cannabis sativa HOM05D004085 ORTHO05D043374 3.5e-10 70.1 51 62.7
Eucgr.B03119 Eucalyptus grandis HOM05D004085 ORTHO05D195170 1.3e-09 68.2 56 62.5
HPP92_003723 Vanilla planifolia HOM05D004085 ORTHO05D005189 1.7e-09 67.8 80 53.8
PGR102G2199 Punica granatum HOM05D004085 ORTHO05D000487 2.3e-06 57.4 54 53.7
BolC7t43945H Brassica oleracea HOM05D004085 ORTHO05D005189 3.1e-06 57.0 42 69.0
Medtr8g066150 Medicago truncatula HOM05D004085 ORTHO05D263454 4.0e-06 56.6 82 41.5


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