Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_6G020210 Cucumis sativus L. HOM05D000747 ORTHO05D004807 1.0e-84 316.6 155 100.0
MELO3C021252.2 Cucumis melo HOM05D000747 ORTHO05D004807 3.2e-73 278.5 147 91.8
ClCG06G004370 Citrullus lanatus HOM05D000747 ORTHO05D004807 6.6e-71 270.8 147 88.4
Sed0003045 Sechium edule HOM05D000747 ORTHO05D004807 3.0e-63 245.4 147 82.3
Sed0005984 Sechium edule HOM05D000747 ORTHO05D004807 5.6e-62 241.1 148 78.4
CsaV3_6G021240 Cucumis sativus L. HOM05D000747 ORTHO05D004807 3.7e-58 228.4 114 100.0
Ciclev10004231m.g Citrus clementina HOM05D000747 ORTHO05D004807 5.8e-43 177.9 148 53.4
Atru.chr4.3105 Acer truncatum HOM05D000747 ORTHO05D004807 1.3e-42 176.8 148 55.4
GSVIVG01034942001 Vitis vinifera HOM05D000747 ORTHO05D004807 1.4e-41 173.3 146 55.5
Manes.03G208600 Manihot esculenta HOM05D000747 ORTHO05D004807 3.2e-41 172.2 147 54.4
QL06p013303 Quercus lobata HOM05D000747 ORTHO05D004807 1.6e-40 169.9 147 53.7
Actinidia18481 Actinidia chinensis HOM05D000747 ORTHO05D004807 2.7e-40 169.1 148 54.1
Rhsim04G0243000 Rhododendron simsii HOM05D000747 ORTHO05D004807 2.7e-40 169.1 148 55.4
Dinv15128 Davidia involucrata HOM05D000747 ORTHO05D004807 3.5e-40 168.7 148 54.1
Potri.010G150000 Populus trichocarpa HOM05D000747 ORTHO05D004807 1.0e-39 167.2 148 52.7
RcHm_v2.0_Chr4g0426201 Rosa chinensis HOM05D000747 ORTHO05D004807 1.3e-39 166.8 147 54.4
Sabra08G0076600 Salix brachista HOM05D000747 ORTHO05D004807 1.7e-39 166.4 148 53.4
Prupe.1G111600 Prunus persica HOM05D000747 ORTHO05D004807 2.3e-39 166.0 148 52.7
CANSAT78G0170 Cannabis sativa HOM05D000747 ORTHO05D004807 5.1e-39 164.9 148 52.0
Potri.008G101300 Populus trichocarpa HOM05D000747 ORTHO05D004807 6.6e-39 164.5 148 52.7
TAR362G0993 Trochodendron aralioides HOM05D000747 ORTHO05D004807 8.7e-39 164.1 148 52.0
MD16G1148200 Malus domestica HOM05D000747 ORTHO05D004807 1.1e-38 163.7 148 51.4
TWI53G1735 Tripterygium wilfordii HOM05D000747 ORTHO05D004807 1.1e-38 163.7 150 52.0
vmacro07974 Vaccinium macrocarpon HOM05D000747 ORTHO05D004807 1.1e-38 163.7 148 55.4
FAN17G1353 Fragaria x ananassa HOM05D000747 ORTHO05D004807 2.5e-38 162.5 148 52.0
CiPaw.01G133500 Carya illinoinensis HOM05D000747 ORTHO05D004807 4.3e-38 161.8 145 53.8
MD13G1148100 Malus domestica HOM05D000747 ORTHO05D004807 5.6e-38 161.4 148 51.4
Cc03_g00480 Coffea canephora HOM05D000747 ORTHO05D004807 1.3e-37 160.2 147 52.4
FvH4_4g20760 Fragaria vesca HOM05D000747 ORTHO05D004807 2.8e-37 159.1 148 50.7
Sabra10G0115600 Salix brachista HOM05D000747 ORTHO05D004807 2.8e-37 159.1 148 51.4
TAR633G1529 Trochodendron aralioides HOM05D000747 ORTHO05D004807 2.8e-37 159.1 148 50.0
FAN07G0175 Fragaria x ananassa HOM05D000747 ORTHO05D004807 3.6e-37 158.7 146 51.4
MBI18_g27389_MAGBIO Magnolia biondii HOM05D000747 ORTHO05D004807 3.6e-37 158.7 147 47.6
Gohir.D09G242100 Gossypium hirsutum HOM05D000747 ORTHO05D004807 6.2e-37 157.9 148 47.3
Gorai.006G265700 Gossypium raimondii HOM05D000747 ORTHO05D004807 6.2e-37 157.9 148 47.3
Hma1.2p1_1096F.1_g256630 Hydrangea macrophylla HOM05D000747 ORTHO05D004807 8.1e-37 157.5 148 52.0
Duzib151G0433 Durio zibethinus HOM05D000747 ORTHO05D004807 1.1e-36 157.1 148 48.6
CSS0019056 Camellia sinensis var. sinensis HOM05D000747 ORTHO05D004807 1.8e-36 156.4 148 49.3
Cpa.g.sc146.73 Carica papaya HOM05D000747 ORTHO05D004807 2.4e-36 156.0 147 50.3
Sp3g15400 Schrenkiella parvula HOM05D000747 ORTHO05D004807 2.4e-36 156.0 148 50.7
Gohir.A09G241400 Gossypium hirsutum HOM05D000747 ORTHO05D004807 3.1e-36 155.6 148 46.6
Lalb_Chr15g0089041 Lupinus albus HOM05D000747 ORTHO05D004807 3.1e-36 155.6 148 50.0
Ca_00947_v3 Cicer arietinum L. HOM05D000747 ORTHO05D004807 6.9e-36 154.5 147 51.7
Sc25g0001570 Simmondsia chinensis HOM05D000747 ORTHO05D004807 6.9e-36 154.5 147 51.0
Lsat_1_v5_gn_6_70541 Lactuca sativa HOM05D000747 ORTHO05D004807 1.5e-35 153.3 148 45.9
BcaC09g48678 Brassica carinata HOM05D000747 ORTHO05D004807 2.6e-35 152.5 148 48.6
Carub.0003s1696 Capsella rubella HOM05D000747 ORTHO05D004807 4.5e-35 151.8 148 45.3
AL3G30230 Arabidopsis lyrata HOM05D000747 ORTHO05D004807 7.6e-35 151.0 148 46.6
A05p32580 Brassica napus HOM05D000747 ORTHO05D004807 7.6e-35 151.0 149 48.3
BraA05t22082Z Brassica rapa HOM05D000747 ORTHO05D004807 7.6e-35 151.0 149 48.3
CSS0023043 Camellia sinensis var. sinensis HOM05D000747 ORTHO05D004807 7.6e-35 151.0 148 48.6
CARHR092470 Cardamine hirsuta HOM05D000747 ORTHO05D004807 7.6e-35 151.0 148 47.3
Nn3g21805 Nelumbo nucifera HOM05D000747 ORTHO05D004807 7.6e-35 151.0 147 49.0
BcaC05g28820 Brassica carinata HOM05D000747 ORTHO05D004807 9.9e-35 150.6 148 46.6
Lj6g0013861 Lotus japonicus HOM05D000747 ORTHO05D004807 9.9e-35 150.6 148 49.3
BraA01t03772Z Brassica rapa HOM05D000747 ORTHO05D004807 1.7e-34 149.8 149 48.3
Gorai.011G204200 Gossypium raimondii HOM05D000747 ORTHO05D004807 1.7e-34 149.8 147 46.3
THA.LOC104820321 Tarenaya hassleriana HOM05D000747 ORTHO05D004807 1.7e-34 149.8 148 50.7
AT3G17205 Arabidopsis thaliana HOM05D000747 ORTHO05D004807 2.2e-34 149.4 148 45.9
BcaB04g20855 Brassica carinata HOM05D000747 ORTHO05D004807 2.2e-34 149.4 148 45.9
arahy.Tifrunner.gnm1.ann1.YUC3W2 Arachis hypogaea HOM05D000747 ORTHO05D004807 3.8e-34 148.7 148 47.3
Gohir.D10G182300 Gossypium hirsutum HOM05D000747 ORTHO05D004807 4.9e-34 148.3 147 46.3
TPR.G10108 Trifolium pratense HOM05D000747 ORTHO05D004807 4.9e-34 148.3 144 50.0
C01p47020 Brassica napus HOM05D000747 ORTHO05D004807 6.4e-34 147.9 149 48.3
Medtr2g033040 Medicago truncatula HOM05D000747 ORTHO05D004807 6.4e-34 147.9 144 51.4
Thecc.04G307300 Theobroma cacao HOM05D000747 ORTHO05D004807 6.4e-34 147.9 148 44.6
BolC5t33666H Brassica oleracea HOM05D000747 ORTHO05D004807 1.4e-33 146.7 149 46.3
arahy.Tifrunner.gnm1.ann1.R130QB Arachis hypogaea HOM05D000747 ORTHO05D004807 1.9e-33 146.4 144 47.9
BolC1t04670H Brassica oleracea HOM05D000747 ORTHO05D004807 1.9e-33 146.4 149 47.7
DCAR_002525 Daucus carota HOM05D000747 ORTHO05D004807 1.9e-33 146.4 145 48.3
Thhalv10019984m.g Eutrema salsugineum HOM05D000747 ORTHO05D004807 1.9e-33 146.4 148 45.9
C05p49250 Brassica napus HOM05D000747 ORTHO05D004807 2.4e-33 146.0 149 46.3
BcaB06g25812 Brassica carinata HOM05D000747 ORTHO05D004807 3.2e-33 145.6 148 47.3
Phvul.006G120900 Phaseolus vulgaris HOM05D000747 ORTHO05D004807 3.2e-33 145.6 148 48.6
Psat1g162680 Pisum sativum HOM05D000747 ORTHO05D004807 3.2e-33 145.6 144 51.4
ATR0693G276 Amborella trichopoda HOM05D000747 ORTHO05D004807 4.2e-33 145.2 144 46.5
A01p37100 Brassica napus HOM05D000747 ORTHO05D004807 4.2e-33 145.2 149 47.7
Glyma.07G235800 Glycine max HOM05D000747 ORTHO05D004807 5.4e-33 144.8 148 45.9
Oeu052157.1 Olea europaea HOM05D000747 ORTHO05D004807 1.2e-32 143.7 147 48.3
Duzib212G0904 Durio zibethinus HOM05D000747 ORTHO05D004807 2.1e-32 142.9 147 46.3
HanXRQChr06g0182841 Helianthus annuus HOM05D000747 ORTHO05D004807 2.1e-32 142.9 148 43.9
Glyma.15G137000 Glycine max HOM05D000747 ORTHO05D004807 2.7e-32 142.5 148 48.0
Peaxi162Scf00126g01514 Petunia axillaris HOM05D000747 ORTHO05D004807 3.5e-32 142.1 147 48.3
PGR031G1986 Punica granatum HOM05D000747 ORTHO05D004807 7.9e-32 141.0 148 50.0
Gohir.A10G175700 Gossypium hirsutum HOM05D000747 ORTHO05D004807 1.3e-31 140.2 146 45.2
Ah.07g203890 Amaranthus hybridus HOM05D000747 ORTHO05D004807 2.3e-31 139.4 147 45.6
arahy.Tifrunner.gnm1.ann1.CPQB8S Arachis hypogaea HOM05D000747 ORTHO05D004807 2.3e-31 139.4 151 44.4
Solyc01g057900.3 Solanum lycopersicum HOM05D000747 ORTHO05D004807 2.3e-31 139.4 147 46.9
Sopen01g023220 Solanum pennellii HOM05D000747 ORTHO05D004807 2.3e-31 139.4 147 46.9
arahy.Tifrunner.gnm1.ann1.NSV5VW Arachis hypogaea HOM05D000747 ORTHO05D004807 3.9e-31 138.7 149 44.3
Glyma.17G037600 Glycine max HOM05D000747 ORTHO05D004807 3.9e-31 138.7 148 45.3
Eucgr.B03986 Eucalyptus grandis HOM05D000747 ORTHO05D004807 1.1e-30 137.1 148 44.6
Aa31LG8G4180 Aethionema arabicum HOM05D000747 ORTHO05D004807 2.5e-30 136.0 148 42.6
Migut.G00024 Erythranthe guttata HOM05D000747 ORTHO05D004807 4.3e-30 135.2 147 42.9
AUR62002590 Chenopodium quinoa HOM05D000747 ORTHO05D004807 5.6e-30 134.8 147 44.9
Phvul.003G118500 Phaseolus vulgaris HOM05D000747 ORTHO05D004807 7.4e-30 134.4 148 43.2
Medtr2g033080 Medicago truncatula HOM05D000747 ORTHO05D004807 1.6e-29 133.3 135 50.4
VMungo1215G1053 Vigna mungo HOM05D000747 ORTHO05D004807 1.6e-29 133.3 150 45.3
CDE11G0596 Ceratophyllum demersum HOM05D000747 ORTHO05D004807 2.8e-29 132.5 148 39.9
SalBow8G1635 Salvia bowleyana HOM05D000747 ORTHO05D004807 1.4e-28 130.2 146 42.5
CDE05G1257 Ceratophyllum demersum HOM05D000747 ORTHO05D004807 3.1e-28 129.0 149 40.9
ECA233G3437 Erigeron canadensis HOM05D000747 ORTHO05D004807 3.1e-28 129.0 158 42.4
MSTRG.10174 Avicennia marina HOM05D000747 ORTHO05D004807 1.2e-27 127.1 146 43.2
Os05g0159000 Oryza sativa ssp. japonica HOM05D000747 ORTHO05D004807 1.5e-27 126.7 148 41.2
Aqoxy2G02629 Aquilegia oxysepala HOM05D000747 ORTHO05D004807 5.8e-27 124.8 180 38.3
EL10Ac3g06290 Beta vulgaris HOM05D000747 ORTHO05D004807 4.9e-26 121.7 145 42.1
SGA_v2.0_scaffold157G37358 Striga asiatica HOM05D000747 ORTHO05D004807 8.4e-26 120.9 147 40.8
CAN.G170.17 Capsicum annuum HOM05D000747 ORTHO05D004807 1.1e-25 120.6 149 41.6
CAN.G170.20 Capsicum annuum HOM05D000747 ORTHO05D004807 1.1e-25 120.6 149 41.6
CAN.G3221.1 Capsicum annuum HOM05D000747 ORTHO05D004807 1.1e-25 120.6 149 41.6
Nitab4.5_0005403g0020 Nicotiana tabacum HOM05D000747 ORTHO05D004807 3.2e-25 119.0 139 43.2
Lj3A836G20 Lonicera japonica HOM05D000747 ORTHO05D004807 9.3e-25 117.5 96 55.2
Nitab4.5_0001334g0040 Nicotiana tabacum HOM05D000747 ORTHO05D004807 1.3e-23 113.6 175 37.7
PSO761G0701 Papaver somniferum HOM05D000747 ORTHO05D004807 3.0e-23 112.5 149 37.6
PSO210G6954 Papaver somniferum HOM05D000747 ORTHO05D004807 4.3e-22 108.6 149 36.9
Hund12236 Selenicereus undatus HOM05D000747 ORTHO05D004807 1.1e-20 104.0 243 28.8
AL947U10010 Arabidopsis lyrata HOM05D000747 ORTHO05D004807 3.4e-19 99.0 114 42.1
HPP92_015995 Vanilla planifolia HOM05D000747 ORTHO05D004807 5.5e-17 91.7 148 32.4
Aqoxy5G03355 Aquilegia oxysepala HOM05D000747 ORTHO05D004807 2.3e-15 86.3 149 36.9
Haze_00834 Corylus avellana HOM05D000747 ORTHO05D004807 1.6e-13 80.1 183 32.8
AUR62030014 Chenopodium quinoa HOM05D000747 ORTHO05D004807 2.2e-13 79.7 96 40.6
SMO165G0153 Selaginella moellendorffii HOM05D000747 ORTHO05D004807 2.4e-12 76.3 148 34.5
SEGI_11758 Sequoiadendron giganteum HOM05D000747 ORTHO05D004807 2.6e-11 72.8 152 31.6
AagrBONN_evm.TU.Sc2ySwM_340.498 Anthoceros agrestis HOM05D000747 ORTHO05D004807 3.2e-09 65.9 141 29.8
Mapoly0140s0005 Marchantia polymorpha HOM05D000747 ORTHO05D004807 4.6e-08 62.0 151 31.8


User provided reference genes

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