Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_6G018460 Cucumis sativus L. HOM05D006652 ORTHO05D008645 9.4e-223 776.5 394 100.0
Sabra19G0103300 Salix brachista HOM05D006652 ORTHO05D008645 8.1e-142 507.7 377 66.0
Sed0018596 Sechium edule HOM05D006652 ORTHO05D008645 4.0e-141 505.4 278 87.4
GSVIVG01020686001 Vitis vinifera HOM05D006652 ORTHO05D008645 9.0e-141 504.2 374 65.0
Sabra19G0100100 Salix brachista HOM05D006652 ORTHO05D008645 1.5e-140 503.4 365 66.8
Potri.019G089700 Populus trichocarpa HOM05D006652 ORTHO05D008645 7.6e-140 501.1 353 68.0
Hma1.2p1_0166F.1_g073540 Hydrangea macrophylla HOM05D006652 ORTHO05D008645 5.5e-138 495.0 328 72.0
Dinv08786 Davidia involucrata HOM05D006652 ORTHO05D008645 2.1e-137 493.0 374 64.4
arahy.Tifrunner.gnm1.ann1.KP1SVS Arachis hypogaea HOM05D006652 ORTHO05D008645 3.5e-137 492.3 328 70.7
QL08p041412 Quercus lobata HOM05D006652 ORTHO05D008645 7.9e-137 491.1 365 67.7
vmacro09218 Vaccinium macrocarpon HOM05D006652 ORTHO05D008645 7.9e-137 491.1 322 71.7
Ca_18890_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 1.3e-136 490.3 373 64.9
Nitab4.5_0000822g0100 Nicotiana tabacum HOM05D006652 ORTHO05D008645 1.3e-136 490.3 349 69.1
CiPaw.03G187000 Carya illinoinensis HOM05D006652 ORTHO05D008645 2.3e-136 489.6 382 64.4
Peaxi162Scf00241g00812 Petunia axillaris HOM05D006652 ORTHO05D008645 2.3e-136 489.6 332 70.2
arahy.Tifrunner.gnm1.ann1.5ZDL5Q Arachis hypogaea HOM05D006652 ORTHO05D008645 3.9e-136 488.8 328 70.1
Atru.chr6.2810_Atru.chr6.2811 Acer truncatum HOM05D006652 ORTHO05D008645 6.7e-136 488.0 392 61.0
CSS0047332 Camellia sinensis var. sinensis HOM05D006652 ORTHO05D008645 6.7e-136 488.0 343 68.8
Lj3g0009013 Lotus japonicus HOM05D006652 ORTHO05D008645 6.7e-136 488.0 331 69.8
Nn1g04382 Nelumbo nucifera HOM05D006652 ORTHO05D008645 1.5e-135 486.9 371 64.4
Glyma.12G122700 Glycine max HOM05D006652 ORTHO05D008645 3.3e-135 485.7 372 63.4
Thecc.01G148700 Theobroma cacao HOM05D006652 ORTHO05D008645 3.3e-135 485.7 371 64.2
Lsat_1_v5_gn_8_140221 Lactuca sativa HOM05D006652 ORTHO05D008645 7.4e-135 484.6 326 70.9
PGR142G2816 Punica granatum HOM05D006652 ORTHO05D008645 7.4e-135 484.6 367 66.2
Glyma.06G283400 Glycine max HOM05D006652 ORTHO05D008645 1.3e-134 483.8 373 63.0
Phvul.011G134400 Phaseolus vulgaris HOM05D006652 ORTHO05D008645 1.3e-134 483.8 344 65.1
Medtr4g079750 Medicago truncatula HOM05D006652 ORTHO05D008645 1.6e-134 483.4 326 69.9
AUR62038922 Chenopodium quinoa HOM05D006652 ORTHO05D008645 2.8e-134 482.6 328 69.5
CAN.G782.5 Capsicum annuum HOM05D006652 ORTHO05D008645 4.8e-134 481.9 331 69.8
HanXRQChr17g0558041 Helianthus annuus HOM05D006652 ORTHO05D008645 6.2e-134 481.5 331 69.8
VMungo1127G0176 Vigna mungo HOM05D006652 ORTHO05D008645 1.4e-133 480.3 372 63.2
Eucgr.K01102 Eucalyptus grandis HOM05D006652 ORTHO05D008645 2.4e-133 479.6 372 64.8
Lj8C103T10 Lonicera japonica HOM05D006652 ORTHO05D008645 3.1e-133 479.2 357 66.1
TAR629G0548 Trochodendron aralioides HOM05D006652 ORTHO05D008645 3.1e-133 479.2 328 68.9
Solyc10g008020.3 Solanum lycopersicum HOM05D006652 ORTHO05D008645 4.0e-133 478.8 323 71.2
Aqoxy4G00418 Aquilegia oxysepala HOM05D006652 ORTHO05D008645 6.9e-133 478.0 345 65.2
ClCG02G017930 Citrullus lanatus HOM05D006652 ORTHO05D008645 9.0e-133 477.6 366 71.0
Migut.H02157 Erythranthe guttata HOM05D006652 ORTHO05D008645 9.0e-133 477.6 321 70.1
Sopen10g003890 Solanum pennellii HOM05D006652 ORTHO05D008645 9.0e-133 477.6 323 71.2
EL10Ac9g20915 Beta vulgaris HOM05D006652 ORTHO05D008645 2.6e-132 476.1 339 67.6
Ciclev10015734m.g Citrus clementina HOM05D006652 ORTHO05D008645 2.6e-132 476.1 364 64.0
MSTRG.14312 Avicennia marina HOM05D006652 ORTHO05D008645 1.3e-131 473.8 382 62.6
Lalb_Chr19g0134921 Lupinus albus HOM05D006652 ORTHO05D008645 1.3e-131 473.8 341 65.4
SalBow7G3656 Salvia bowleyana HOM05D006652 ORTHO05D008645 3.8e-131 472.2 350 66.3
Gohir.A10G153800 Gossypium hirsutum HOM05D006652 ORTHO05D008645 4.9e-131 471.9 363 63.9
Gohir.D10G112300 Gossypium hirsutum HOM05D006652 ORTHO05D008645 4.9e-131 471.9 363 63.6
COL.COLO4_33547 Corchorus olitorius HOM05D006652 ORTHO05D008645 6.5e-131 471.5 375 62.9
Gorai.011G124200 Gossypium raimondii HOM05D006652 ORTHO05D008645 1.1e-130 470.7 363 63.4
Glyma.06G283600 Glycine max HOM05D006652 ORTHO05D008645 1.9e-130 469.9 329 67.2
Nitab4.5_0008146g0020 Nicotiana tabacum HOM05D006652 ORTHO05D008645 2.5e-130 469.5 346 66.8
ECA234G1589 Erigeron canadensis HOM05D006652 ORTHO05D008645 4.6e-129 465.3 322 68.0
Hund07829 Selenicereus undatus HOM05D006652 ORTHO05D008645 7.9e-129 464.5 371 63.1
unitig_21.g20276 Utricularia gibba HOM05D006652 ORTHO05D008645 4.3e-127 458.8 339 64.3
Os10g0181600 Oryza sativa ssp. japonica HOM05D006652 ORTHO05D008645 1.3e-126 457.2 335 65.7
Duzib187G0644 Durio zibethinus HOM05D006652 ORTHO05D008645 1.8e-125 453.4 371 60.4
Zm00001eb223890 Zea mays HOM05D006652 ORTHO05D008645 2.4e-125 453.0 346 63.3
ATR0661G163 Amborella trichopoda HOM05D006652 ORTHO05D008645 9.0e-125 451.1 319 66.5
PGSC0003DMG400010544 Solanum tuberosum HOM05D006652 ORTHO05D008645 4.6e-121 438.7 386 59.1
SGA_v2.0_scaffold109G31132 Striga asiatica HOM05D006652 ORTHO05D008645 1.5e-119 433.7 464 51.1
MELO3C019759.2 Cucumis melo HOM05D006652 ORTHO05D008645 2.6e-116 422.9 220 95.5
MBI11_g14404_MAGBIO Magnolia biondii HOM05D006652 ORTHO05D008645 1.1e-114 417.5 336 61.9
Actinidia39342 Actinidia chinensis HOM05D006652 ORTHO05D008645 7.2e-114 414.8 279 69.2
Manes.13G137800 Manihot esculenta HOM05D006652 ORTHO05D008645 1.0e-112 411.0 266 71.1
Cc05_g08190 Coffea canephora HOM05D006652 ORTHO05D008645 2.0e-111 406.8 300 65.7
TWI59G0297 Tripterygium wilfordii HOM05D006652 ORTHO05D008645 2.0e-111 406.8 316 65.5
Cc05_g08160 Coffea canephora HOM05D006652 ORTHO05D008645 1.7e-110 403.7 305 64.3
Psat7g166280 Pisum sativum HOM05D006652 ORTHO05D008645 4.1e-109 399.1 287 66.9
AUR62038997 Chenopodium quinoa HOM05D006652 ORTHO05D008645 3.4e-108 396.0 366 56.8
Rhsim04G0074100 Rhododendron simsii HOM05D006652 ORTHO05D008645 3.2e-106 389.4 330 58.2
Pp3c3_7460 Physcomitrium patens HOM05D006652 ORTHO05D008645 8.0e-105 384.8 322 57.1
SMO334G0043 Selaginella moellendorffii HOM05D006652 ORTHO05D008645 6.3e-102 375.2 373 51.7
CDE11G0921 Ceratophyllum demersum HOM05D006652 ORTHO05D008645 1.8e-101 373.6 266 64.7
Glyma.06G283500 Glycine max HOM05D006652 ORTHO05D008645 1.6e-100 370.5 290 62.1
Mapoly0061s0036 Marchantia polymorpha HOM05D006652 ORTHO05D008645 8.2e-94 348.2 326 51.2
DCAR_013062 Daucus carota HOM05D006652 ORTHO05D008645 1.5e-90 337.4 332 54.5
MBI11_g19676_MAGBIO Magnolia biondii HOM05D006652 ORTHO05D008645 7.2e-82 308.5 277 55.6
Cc00_g35820 Coffea canephora HOM05D006652 ORTHO05D008645 9.2e-77 291.6 225 64.9
CBR_g20425 Chara braunii HOM05D006652 ORTHO05D008645 1.2e-76 291.2 331 45.9
AagrBONN_evm.TU.Sc2ySwM_228.444 Anthoceros agrestis HOM05D006652 ORTHO05D008645 1.1e-74 284.6 233 59.7
MCO11G400 Micromonas commoda HOM05D006652 ORTHO05D008645 9.5e-74 281.6 314 44.3
TPR.G21861 Trifolium pratense HOM05D006652 ORTHO05D008645 4.4e-71 272.7 190 67.4
Ca_18889_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 1.4e-69 267.7 184 67.9
Zm00001eb307930 Zea mays HOM05D006652 ORTHO05D008645 1.3e-67 261.2 204 57.8
PRCOL_00002204 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 1.2e-65 254.6 321 42.7
PGR142G0648 Punica granatum HOM05D006652 ORTHO05D008645 2.8e-65 253.4 211 60.2
CBR_g20426 Chara braunii HOM05D006652 ORTHO05D008645 1.9e-61 240.7 407 37.6
Zm00001eb202810 Zea mays HOM05D006652 ORTHO05D008645 1.1e-56 224.9 298 43.6
Mapoly0285s0004 Marchantia polymorpha HOM05D006652 ORTHO05D008645 8.9e-56 221.9 220 52.3
Zm00001eb155780 Zea mays HOM05D006652 ORTHO05D008645 2.0e-55 220.7 248 45.6
Cre03.g200350 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D008645 3.2e-53 213.4 360 35.6
Zm00001eb127120 Zea mays HOM05D006652 ORTHO05D008645 4.1e-53 213.0 252 45.6
Pp3c17_23540 Physcomitrium patens HOM05D006652 ORTHO05D008645 8.6e-51 205.3 305 38.4
Mapoly0050s0024 Marchantia polymorpha HOM05D006652 ORTHO05D008645 6.2e-49 199.1 318 36.2
Cre06.g259401 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D008645 4.0e-48 196.4 354 35.9
SMO118G0546 Selaginella moellendorffii HOM05D006652 ORTHO05D008645 2.6e-47 193.7 302 36.1
SEGI_35274 Sequoiadendron giganteum HOM05D006652 ORTHO05D008645 1.1e-45 188.3 328 36.0
arahy.Tifrunner.gnm1.ann1.MYHL2J Arachis hypogaea HOM05D006652 ORTHO05D008645 1.3e-43 181.4 141 61.0
CBR_g34298 Chara braunii HOM05D006652 ORTHO05D008645 6.2e-41 172.6 372 34.9
Ca_18891_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 1.1e-40 171.8 151 60.3
Haze_13351 Corylus avellana HOM05D006652 ORTHO05D008645 1.5e-39 167.9 120 64.2
MCO08G076 Micromonas commoda HOM05D006652 ORTHO05D008645 2.9e-38 163.7 323 32.2
PRCOL_00006996 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 1.0e-35 155.2 315 33.3
Zm00001eb272210 Zea mays HOM05D006652 ORTHO05D008645 9.6e-34 148.7 201 40.3
Haze_13350 Corylus avellana HOM05D006652 ORTHO05D008645 3.6e-33 146.7 93 73.1
ECA234G0151 Erigeron canadensis HOM05D006652 ORTHO05D008645 2.0e-31 141.0 102 61.8
TPR.G21859 Trifolium pratense HOM05D006652 ORTHO05D008645 1.1e-29 135.2 138 51.4
AUR62024835 Chenopodium quinoa HOM05D006652 ORTHO05D008645 5.4e-29 132.9 142 49.3
TPR.G21704 Trifolium pratense HOM05D006652 ORTHO05D008645 2.1e-25 120.9 123 49.6
AagrBONN_evm.TU.Sc2ySwM_117.2543 Anthoceros agrestis HOM05D006652 ORTHO05D008645 3.1e-24 117.1 172 38.4
Glyma.12G122501 Glycine max HOM05D006652 ORTHO05D008645 2.5e-18 97.4 86 57.0
PRCOL_00001996 Prasinoderma coloniale HOM05D006652 ORTHO05D028803 1.8e-16 91.3 242 27.7
Cc05_g08180 Coffea canephora HOM05D006652 ORTHO05D008645 1.5e-15 88.2 56 75.0
Cc05_g08150 Coffea canephora HOM05D006652 ORTHO05D008645 7.6e-15 85.9 56 73.2
Ah.07g202300 Amaranthus hybridus HOM05D006652 ORTHO05D008645 1.7e-14 84.7 57 68.4
MCO15G420 Micromonas commoda HOM05D006652 ORTHO05D028803 1.2e-12 78.6 230 24.8
Cre06.g286350 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D028803 6.0e-12 76.3 244 25.4
MCO09G339 Micromonas commoda HOM05D006652 ORTHO05D268879 7.9e-12 75.9 233 25.3
Haze_13352 Corylus avellana HOM05D006652 ORTHO05D008645 1.0e-11 75.5 138 35.5
Ah.08g222620 Amaranthus hybridus HOM05D006652 ORTHO05D008645 1.8e-11 74.7 51 66.7
PRCOL_00002129 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 3.9e-11 73.6 245 26.1
Cre06.g286300 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D028803 8.7e-11 72.4 246 26.4
Zm00001eb048070 Zea mays HOM05D001272 ORTHO05D001099 2.4e-08 64.3 53 52.8


User provided reference genes

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