Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_6G016760 Cucumis sativus L. HOM05D004332 ORTHO05D005116 1.2e-68 263.1 130 100.0
MELO3C025906.2 Cucumis melo HOM05D004332 ORTHO05D005116 1.5e-68 262.7 130 99.2
ClCG02G020050 Citrullus lanatus HOM05D004332 ORTHO05D005116 1.8e-66 255.8 129 96.9
Sed0013921 Sechium edule HOM05D004332 ORTHO05D005116 1.0e-64 250.0 130 92.3
COL.COLO4_18528 Corchorus olitorius HOM05D004332 ORTHO05D005116 5.4e-58 227.6 130 80.8
Thecc.09G319900 Theobroma cacao HOM05D004332 ORTHO05D005116 1.2e-57 226.5 130 80.8
Gohir.A03G043200 Gossypium hirsutum HOM05D004332 ORTHO05D005116 2.0e-57 225.7 130 80.0
Gorai.009G098500 Gossypium raimondii HOM05D004332 ORTHO05D005116 2.0e-57 225.7 130 81.5
Gohir.D03G124100 Gossypium hirsutum HOM05D004332 ORTHO05D005116 2.7e-57 225.3 130 80.8
Gohir.A05G094800 Gossypium hirsutum HOM05D004332 ORTHO05D005116 5.9e-57 224.2 130 80.8
Gohir.D05G095080 Gossypium hirsutum HOM05D004332 ORTHO05D005116 5.9e-57 224.2 130 80.8
Gohir.D05G095200 Gossypium hirsutum HOM05D004332 ORTHO05D005116 5.9e-57 224.2 130 80.8
QL01p031517 Quercus lobata HOM05D004332 ORTHO05D005116 5.9e-57 224.2 129 81.4
Gorai.003G130800 Gossypium raimondii HOM05D004332 ORTHO05D005116 2.3e-56 222.2 131 80.2
Prupe.6G074300 Prunus persica HOM05D004332 ORTHO05D005116 3.8e-56 221.5 133 80.5
MD03G1090100 Malus domestica HOM05D004332 ORTHO05D005116 1.1e-55 219.9 132 80.3
GSVIVG01024938001 Vitis vinifera HOM05D004332 ORTHO05D005116 1.1e-55 219.9 130 80.0
Ciclev10029562m.g Citrus clementina HOM05D004332 ORTHO05D005116 1.9e-55 219.2 134 77.6
Duzib168G2052 Durio zibethinus HOM05D004332 ORTHO05D005116 1.9e-55 219.2 130 77.7
TWI31G0816 Tripterygium wilfordii HOM05D004332 ORTHO05D005116 1.9e-55 219.2 130 80.0
Dinv04179 Davidia involucrata HOM05D004332 ORTHO05D005116 2.5e-55 218.8 131 80.2
Dinv17021 Davidia involucrata HOM05D004332 ORTHO05D005116 2.5e-55 218.8 131 79.4
Dinv42969 Davidia involucrata HOM05D004332 ORTHO05D005116 2.5e-55 218.8 131 79.4
Dinv43130 Davidia involucrata HOM05D004332 ORTHO05D005116 2.5e-55 218.8 131 79.4
CiPaw.14G067900 Carya illinoinensis HOM05D004332 ORTHO05D005116 3.3e-55 218.4 130 80.0
CiPaw.13G092600 Carya illinoinensis HOM05D004332 ORTHO05D005116 5.5e-55 217.6 130 79.2
Manes.01G172400 Manihot esculenta HOM05D004332 ORTHO05D005116 5.5e-55 217.6 130 79.2
CSS0035025 Camellia sinensis var. sinensis HOM05D004332 ORTHO05D005116 7.2e-55 217.2 131 79.4
Rhsim01G0229500 Rhododendron simsii HOM05D004332 ORTHO05D005116 7.2e-55 217.2 130 77.7
MD11G1099700 Malus domestica HOM05D004332 ORTHO05D005116 1.2e-54 216.5 134 79.1
CANSAT54G0234 Cannabis sativa HOM05D004332 ORTHO05D005116 1.6e-54 216.1 130 78.5
Actinidia34413 Actinidia chinensis HOM05D004332 ORTHO05D005116 2.1e-54 215.7 131 78.6
Oeu017398.1 Olea europaea HOM05D004332 ORTHO05D005116 2.1e-54 215.7 132 76.5
SGA_v2.0_scaffold132G34538 Striga asiatica HOM05D004332 ORTHO05D005116 2.1e-54 215.7 131 74.8
unitig_6.g29275 Utricularia gibba HOM05D004332 ORTHO05D005116 2.8e-54 215.3 130 76.9
unitig_747.g21434 Utricularia gibba HOM05D004332 ORTHO05D005116 2.8e-54 215.3 130 76.9
Hma1.2p1_0615F.1_g189860 Hydrangea macrophylla HOM05D004332 ORTHO05D005116 3.6e-54 214.9 130 80.8
Gohir.D07G103500 Gossypium hirsutum HOM05D004332 ORTHO05D005116 4.7e-54 214.5 129 80.6
AT5G59410 Arabidopsis thaliana HOM05D004332 ORTHO05D005116 8.0e-54 213.8 131 79.4
CSS0027892 Camellia sinensis var. sinensis HOM05D004332 ORTHO05D005116 8.0e-54 213.8 133 77.4
Eucgr.J02045 Eucalyptus grandis HOM05D004332 ORTHO05D005116 8.0e-54 213.8 133 78.2
ClCG03G001410 Citrullus lanatus HOM05D004332 ORTHO05D005116 1.0e-53 213.4 130 79.2
Duzib150G0187 Durio zibethinus HOM05D004332 ORTHO05D005116 1.4e-53 213.0 130 79.2
FvH4_3g36490 Fragaria vesca HOM05D004332 ORTHO05D005116 1.4e-53 213.0 131 79.4
FAN11G3576 Fragaria x ananassa HOM05D004332 ORTHO05D005116 1.4e-53 213.0 131 79.4
AL8G35880 Arabidopsis lyrata HOM05D004332 ORTHO05D005116 2.3e-53 212.2 130 78.5
Glyma.11G138900 Glycine max HOM05D004332 ORTHO05D005116 2.3e-53 212.2 130 80.0
Manes.02G131400 Manihot esculenta HOM05D004332 ORTHO05D005116 2.3e-53 212.2 130 78.5
Actinidia37195 Actinidia chinensis HOM05D004332 ORTHO05D005116 3.0e-53 211.8 130 79.2
FAN25G2250 Fragaria x ananassa HOM05D004332 ORTHO05D005116 3.0e-53 211.8 131 78.6
Migut.N00901 Erythranthe guttata HOM05D004332 ORTHO05D005116 4.0e-53 211.5 131 74.8
Glyma.12G062500 Glycine max HOM05D004332 ORTHO05D005116 4.0e-53 211.5 130 80.0
Rhsim13G0081500 Rhododendron simsii HOM05D004332 ORTHO05D005116 4.0e-53 211.5 130 77.7
TWI75G0441 Tripterygium wilfordii HOM05D004332 ORTHO05D005116 4.0e-53 211.5 130 77.7
FAN16G1081 Fragaria x ananassa HOM05D004332 ORTHO05D005116 5.2e-53 211.1 131 77.9
Oeu002423.1 Olea europaea HOM05D004332 ORTHO05D005116 5.2e-53 211.1 131 75.6
Lsat_1_v5_gn_9_23661 Lactuca sativa HOM05D004332 ORTHO05D005116 6.8e-53 210.7 130 77.7
VMungo1127G1024 Vigna mungo HOM05D004332 ORTHO05D005116 6.8e-53 210.7 130 76.9
Carub.0008s2008 Capsella rubella HOM05D004332 ORTHO05D005116 8.9e-53 210.3 132 78.0
arahy.Tifrunner.gnm1.ann1.KAW7XL Arachis hypogaea HOM05D004332 ORTHO05D005116 1.2e-52 209.9 130 77.7
Thhalv10015001m.g Eutrema salsugineum HOM05D004332 ORTHO05D005116 1.2e-52 209.9 132 78.8
Sed0019241 Sechium edule HOM05D004332 ORTHO05D005116 1.5e-52 209.5 130 77.7
TPR.G34281 Trifolium pratense HOM05D004332 ORTHO05D005116 1.5e-52 209.5 130 76.9
MELO3C020622.2 Cucumis melo HOM05D004332 ORTHO05D005116 2.6e-52 208.8 130 75.4
TAR633G2148 Trochodendron aralioides HOM05D004332 ORTHO05D005116 2.6e-52 208.8 130 76.9
RcHm_v2.0_Chr5g0065351 Rosa chinensis HOM05D004332 ORTHO05D005116 3.4e-52 208.4 132 75.8
Cc01_g13020 Coffea canephora HOM05D004332 ORTHO05D005116 4.4e-52 208.0 130 76.2
Gohir.A07G099000 Gossypium hirsutum HOM05D004332 ORTHO05D005116 4.4e-52 208.0 130 77.7
SalBow2G0012 Salvia bowleyana HOM05D004332 ORTHO05D005116 4.4e-52 208.0 134 72.4
Sp6g21090 Schrenkiella parvula HOM05D004332 ORTHO05D005116 4.4e-52 208.0 130 77.7
Sed0025770 Sechium edule HOM05D004332 ORTHO05D005116 5.7e-52 207.6 130 76.9
CsaV3_1G034360 Cucumis sativus L. HOM05D004332 ORTHO05D005116 7.5e-52 207.2 130 76.2
Phvul.011G063600 Phaseolus vulgaris HOM05D004332 ORTHO05D005116 7.5e-52 207.2 130 78.5
Lalb_Chr03g0026581 Lupinus albus HOM05D004332 ORTHO05D005116 1.3e-51 206.5 130 73.8
MBI05_g28381_MAGBIO Magnolia biondii HOM05D004332 ORTHO05D005116 1.7e-51 206.1 130 73.1
Hund04945 Selenicereus undatus HOM05D004332 ORTHO05D005116 2.2e-51 205.7 130 73.8
Medtr2g097270 Medicago truncatula HOM05D004332 ORTHO05D005116 2.8e-51 205.3 130 73.8
THA.LOC104814879 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 3.7e-51 204.9 130 76.2
CARHR285780 Cardamine hirsuta HOM05D004332 ORTHO05D005116 4.9e-51 204.5 132 75.0
Oeu064111.2 Olea europaea HOM05D004332 ORTHO05D005116 6.3e-51 204.1 130 70.8
HanXRQChr08g0237001 Helianthus annuus HOM05D004332 ORTHO05D005116 8.3e-51 203.8 130 75.4
Sc12g0001450 Simmondsia chinensis HOM05D004332 ORTHO05D005116 8.3e-51 203.8 130 76.2
ATR0559G209 Amborella trichopoda HOM05D004332 ORTHO05D005116 1.8e-50 202.6 130 73.1
Lalb_Chr19g0137881 Lupinus albus HOM05D004332 ORTHO05D005116 1.8e-50 202.6 130 73.8
Psat5g286720 Pisum sativum HOM05D004332 ORTHO05D005116 1.8e-50 202.6 130 72.3
Lj3g0024178 Lotus japonicus HOM05D004332 ORTHO05D005116 7.0e-50 200.7 130 73.1
Ah.08g219640 Amaranthus hybridus HOM05D004332 ORTHO05D005116 9.2e-50 200.3 130 71.5
Sc21g0005870 Simmondsia chinensis HOM05D004332 ORTHO05D005116 9.2e-50 200.3 130 75.4
EL10Ac7g16034 Beta vulgaris HOM05D004332 ORTHO05D005116 1.2e-49 199.9 130 74.6
Nn2g11136 Nelumbo nucifera HOM05D004332 ORTHO05D005116 1.2e-49 199.9 130 70.8
Potri.009G032100 Populus trichocarpa HOM05D004332 ORTHO05D005116 1.2e-49 199.9 134 71.6
Potri.001G241500 Populus trichocarpa HOM05D004332 ORTHO05D005116 1.6e-49 199.5 114 79.8
THA.LOC104810775 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 2.0e-49 199.1 130 74.6
Gorai.001G111400 Gossypium raimondii HOM05D004332 ORTHO05D005116 2.7e-49 198.7 122 78.7
Aa31sc23G410 Aethionema arabicum HOM05D004332 ORTHO05D005116 4.5e-49 198.0 132 73.5
AUR62009559 Chenopodium quinoa HOM05D004332 ORTHO05D005116 4.5e-49 198.0 130 72.3
Thhalv10017410m.g Eutrema salsugineum HOM05D004332 ORTHO05D005116 4.5e-49 198.0 133 71.4
PGR102G2585 Punica granatum HOM05D004332 ORTHO05D005116 4.5e-49 198.0 132 72.7
vmacro14542 Vaccinium macrocarpon HOM05D004332 ORTHO05D005116 7.8e-49 197.2 118 77.1
ECA247G3838 Erigeron canadensis HOM05D004332 ORTHO05D005116 1.0e-48 196.8 127 75.6
Sabra16G0146000 Salix brachista HOM05D004332 ORTHO05D005116 1.3e-48 196.4 145 68.3
CARHR122250 Cardamine hirsuta HOM05D004332 ORTHO05D005116 1.7e-48 196.1 134 72.4
Nitab4.5_0000463g0140 Nicotiana tabacum HOM05D004332 ORTHO05D005116 1.7e-48 196.1 130 70.0
BraA04t17767Z Brassica rapa HOM05D004332 ORTHO05D005116 2.3e-48 195.7 134 72.4
Nitab4.5_0001326g0120 Nicotiana tabacum HOM05D004332 ORTHO05D005116 2.3e-48 195.7 130 70.0
A04p21990 Brassica napus HOM05D004332 ORTHO05D005116 2.9e-48 195.3 134 71.6
AUR62001771 Chenopodium quinoa HOM05D004332 ORTHO05D005116 2.9e-48 195.3 130 71.5
PGSC0003DMG400030417 Solanum tuberosum HOM05D004332 ORTHO05D005116 2.9e-48 195.3 130 70.0
A07p19440 Brassica napus HOM05D004332 ORTHO05D005116 6.6e-48 194.1 134 70.1
Atru.chr3.3947 Acer truncatum HOM05D004332 ORTHO05D005116 8.6e-48 193.7 138 71.7
BraA07t29650Z Brassica rapa HOM05D004332 ORTHO05D005116 8.6e-48 193.7 134 70.1
THA.LOC104826319 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 8.6e-48 193.7 136 70.6
BcaC02g11036 Brassica carinata HOM05D004332 ORTHO05D005116 1.5e-47 193.0 134 69.4
C04p21940 Brassica napus HOM05D004332 ORTHO05D005116 1.5e-47 193.0 134 69.4
BolC4t23714H Brassica oleracea HOM05D004332 ORTHO05D005116 1.5e-47 193.0 134 69.4
AL146U10030 Arabidopsis lyrata HOM05D004332 ORTHO05D005116 1.9e-47 192.6 133 70.7
Aa31LG5G7210 Aethionema arabicum HOM05D004332 ORTHO05D005116 3.3e-47 191.8 133 68.4
BcaB02g10224 Brassica carinata HOM05D004332 ORTHO05D005116 3.3e-47 191.8 134 69.4
BcaB06g28270 Brassica carinata HOM05D004332 ORTHO05D005116 3.3e-47 191.8 134 70.1
BcaC02g08120 Brassica carinata HOM05D004332 ORTHO05D005116 3.3e-47 191.8 134 69.4
C04p58150 Brassica napus HOM05D004332 ORTHO05D005116 3.3e-47 191.8 134 69.4
Sp4g11830 Schrenkiella parvula HOM05D004332 ORTHO05D005116 3.3e-47 191.8 133 69.2
BolC4t27343H Brassica oleracea HOM05D004332 ORTHO05D005116 4.3e-47 191.4 134 69.4
Solyc06g076260.3 Solanum lycopersicum HOM05D004332 ORTHO05D005116 4.3e-47 191.4 130 68.5
AT2G29020 Arabidopsis thaliana HOM05D004332 ORTHO05D005116 5.6e-47 191.0 134 69.4
Carub.0004s1001 Capsella rubella HOM05D004332 ORTHO05D005116 2.1e-46 189.1 134 70.1
PSO339G1935 Papaver somniferum HOM05D004332 ORTHO05D005116 2.8e-46 188.7 126 73.0
PSO151G0214 Papaver somniferum HOM05D004332 ORTHO05D005116 3.6e-46 188.3 126 73.0
arahy.Tifrunner.gnm1.ann1.WMUR0J Arachis hypogaea HOM05D004332 ORTHO05D005116 6.1e-46 187.6 117 76.1
CAN.G394.64 Capsicum annuum HOM05D004332 ORTHO05D005116 6.1e-46 187.6 131 67.9
SEGI_11468 Sequoiadendron giganteum HOM05D004332 ORTHO05D005116 6.1e-46 187.6 130 66.9
TAR636G3330 Trochodendron aralioides HOM05D004332 ORTHO05D005116 1.8e-45 186.0 119 72.3
Aqoxy1G00923 Aquilegia oxysepala HOM05D004332 ORTHO05D005116 3.1e-45 185.3 112 75.0
THA.LOC104800671 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 4.0e-45 184.9 132 65.9
DCAR_018915 Daucus carota HOM05D004332 ORTHO05D005116 5.2e-45 184.5 120 70.8
Sabra09G0022800 Salix brachista HOM05D004332 ORTHO05D005116 1.3e-43 179.9 125 68.8
CDE04G0625 Ceratophyllum demersum HOM05D004332 ORTHO05D005116 4.9e-43 177.9 118 66.9
arahy.Tifrunner.gnm1.ann1.TT4C38 Arachis hypogaea HOM05D004332 ORTHO05D005116 6.4e-43 177.6 127 68.5
Lsat_1_v5_gn_8_73521 Lactuca sativa HOM05D004332 ORTHO05D005116 1.4e-42 176.4 122 68.9
arahy.Tifrunner.gnm1.ann1.A22IES Arachis hypogaea HOM05D004332 ORTHO05D005116 3.2e-42 175.3 122 68.9
CDE07G0755 Ceratophyllum demersum HOM05D004332 ORTHO05D005116 1.2e-41 173.3 130 61.5
Mapoly0045s0062 Marchantia polymorpha HOM05D004332 ORTHO05D005116 4.6e-41 171.4 126 62.7
Os05g0110600 Oryza sativa ssp. japonica HOM05D004332 ORTHO05D005116 6.6e-40 167.5 130 62.3
Zm00001eb266910 Zea mays HOM05D004332 ORTHO05D005116 1.1e-39 166.8 118 66.9
SMO304G0081 Selaginella moellendorffii HOM05D004332 ORTHO05D005116 1.5e-39 166.4 130 58.5
HanXRQChr07g0197291 Helianthus annuus HOM05D004332 ORTHO05D005116 5.6e-39 164.5 139 59.7
Pp3c16_16760 Physcomitrium patens HOM05D004332 ORTHO05D005116 1.1e-37 160.2 115 67.0
Nn2g13368 Nelumbo nucifera HOM05D004332 ORTHO05D005116 4.9e-35 151.4 91 74.7
AagrBONN_evm.TU.Sc2ySwM_228.3328 Anthoceros agrestis HOM05D004332 ORTHO05D005116 1.1e-34 150.2 131 57.3
Pp3c6_17300 Physcomitrium patens HOM05D004332 ORTHO05D005116 1.1e-31 140.2 116 57.8
Haze_24115 Corylus avellana HOM05D004332 ORTHO05D005116 2.0e-28 129.4 77 76.6
Sopen06g032690 Solanum pennellii HOM05D004332 ORTHO05D005116 2.0e-28 129.4 78 75.6
Actinidia07026 Actinidia chinensis HOM05D004332 ORTHO05D005116 5.4e-26 121.3 85 71.8
vmacro03061 Vaccinium macrocarpon HOM05D004332 ORTHO05D005116 1.7e-24 116.3 79 68.4
FAN21G1178 Fragaria x ananassa HOM05D004332 ORTHO05D005116 4.3e-23 111.7 75 70.7
AL4G23580 Arabidopsis lyrata HOM05D004332 ORTHO05D005116 5.2e-21 104.8 77 64.9
TAR369G0503 Trochodendron aralioides HOM05D004332 ORTHO05D005116 8.9e-21 104.0 75 64.0
SEGI_12680 Sequoiadendron giganteum HOM05D004332 ORTHO05D005116 1.5e-20 103.2 76 60.5
Peaxi162Scf00774g00129 Petunia axillaris HOM05D004332 ORTHO05D005116 1.7e-19 99.8 56 83.9
Actinidia23932 Actinidia chinensis HOM05D004332 ORTHO05D005116 4.9e-19 98.2 60 80.0
SHI47893 Sapria himalayana HOM05D004332 ORTHO05D005116 4.4e-12 75.1 50 68.0
Cre08.g376000 Chlamydomonas reinhardtii HOM05D004332 ORTHO05D005116 4.9e-11 71.6 95 35.8
HPP92_028206 Vanilla planifolia HOM05D004332 ORTHO05D005116 1.1e-10 70.5 62 53.2
Eucgr.H02119 Eucalyptus grandis HOM05D004332 ORTHO05D005116 6.2e-06 54.7 42 59.5


User provided reference genes

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