Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_6G016170 Cucumis sativus L. HOM05D004149 ORTHO05D174512 9.3e-74 280.0 133 100.0
Sed0020125 Sechium edule HOM05D004149 ORTHO05D005028 1.2e-12 77.0 63 58.7
Prupe.6G055700 Prunus persica HOM05D004149 ORTHO05D005028 6.8e-08 61.2 63 49.2
Aqoxy4G02534 Aquilegia oxysepala HOM05D004149 ORTHO05D005028 8.9e-08 60.8 63 46.0
PGR102G2658 Punica granatum HOM05D004149 ORTHO05D005028 8.9e-08 60.8 63 44.4
CDE03G0191 Ceratophyllum demersum HOM05D004149 ORTHO05D005028 2.0e-07 59.7 62 41.9
ClCG10G022210 Citrullus lanatus HOM05D004149 ORTHO05D005028 2.6e-07 59.3 62 41.9
Thecc.09G299600 Theobroma cacao HOM05D004149 ORTHO05D005028 2.6e-07 59.3 63 44.4
Cfa011711 Carpinus fangiana HOM05D004149 ORTHO05D005028 3.4e-07 58.9 63 46.0
CDE04G2602 Ceratophyllum demersum HOM05D004149 ORTHO05D005028 3.4e-07 58.9 62 41.9
Ciclev10029239m.g Citrus clementina HOM05D004149 ORTHO05D005028 3.4e-07 58.9 62 43.5
CsaV3_3G033680 Cucumis sativus L. HOM05D004149 ORTHO05D005028 3.4e-07 58.9 62 41.9
MBI15_g14842_MAGBIO Magnolia biondii HOM05D004149 ORTHO05D005028 3.4e-07 58.9 63 42.9
Os05g0467300 Oryza sativa ssp. japonica HOM05D004149 ORTHO05D005028 3.4e-07 58.9 62 43.5
ATR0681G135 Amborella trichopoda HOM05D004149 ORTHO05D005028 4.4e-07 58.5 63 44.4
Dinv03100 Davidia involucrata HOM05D004149 ORTHO05D005028 4.4e-07 58.5 63 44.4
Haze_24342 Corylus avellana HOM05D004149 ORTHO05D005028 5.8e-07 58.2 63 46.0
FAN09G2001 Fragaria x ananassa HOM05D004149 ORTHO05D005028 5.8e-07 58.2 63 44.4
MELO3C009158.2 Cucumis melo HOM05D004149 ORTHO05D005028 7.5e-07 57.8 62 40.3
FvH4_6g11300 Fragaria vesca HOM05D004149 ORTHO05D005028 7.5e-07 57.8 63 42.9
FAN14G0231 Fragaria x ananassa HOM05D004149 ORTHO05D005028 7.5e-07 57.8 63 42.9
FAN14G3883 Fragaria x ananassa HOM05D004149 ORTHO05D005028 7.5e-07 57.8 63 42.9
HPP92_017934 Vanilla planifolia HOM05D004149 ORTHO05D005028 7.5e-07 57.8 62 43.5
CANSAT54G2318 Cannabis sativa HOM05D004149 ORTHO05D005028 9.8e-07 57.4 63 44.4
Cpa.g.sc112.1 Carica papaya HOM05D004149 ORTHO05D005028 9.8e-07 57.4 63 44.4
Eucgr.B02246 Eucalyptus grandis HOM05D004149 ORTHO05D005028 9.8e-07 57.4 63 42.9
MD03G1067200 Malus domestica HOM05D004149 ORTHO05D005028 9.8e-07 57.4 63 44.4
Glyma.02G227600 Glycine max HOM05D004149 ORTHO05D005028 1.3e-06 57.0 63 44.4
TWI31G0142 Tripterygium wilfordii HOM05D004149 ORTHO05D005028 1.3e-06 57.0 62 40.3
CSS0016200 Camellia sinensis var. sinensis HOM05D004149 ORTHO05D005028 1.7e-06 56.6 64 46.9
Cc06_g01230 Coffea canephora HOM05D004149 ORTHO05D005028 1.7e-06 56.6 63 41.3
Glyma.14G194500 Glycine max HOM05D004149 ORTHO05D005028 1.7e-06 56.6 63 44.4
QL01p038648 Quercus lobata HOM05D004149 ORTHO05D005028 1.7e-06 56.6 63 44.4
Medtr5g071240 Medicago truncatula HOM05D004149 ORTHO05D005028 2.2e-06 56.2 63 44.4
Prupe.6G279000 Prunus persica HOM05D004149 ORTHO05D005028 2.2e-06 56.2 63 42.9
VMungo0647G1724 Vigna mungo HOM05D004149 ORTHO05D005028 2.2e-06 56.2 63 44.4
Dinv14509 Davidia involucrata HOM05D004149 ORTHO05D005028 2.9e-06 55.8 63 41.3
Gohir.A09G089600 Gossypium hirsutum HOM05D004149 ORTHO05D005028 2.9e-06 55.8 63 42.9
Gohir.D09G089700 Gossypium hirsutum HOM05D004149 ORTHO05D005028 2.9e-06 55.8 63 42.9
Gorai.006G105900 Gossypium raimondii HOM05D004149 ORTHO05D005028 2.9e-06 55.8 63 42.9
MD11G1071900 Malus domestica HOM05D004149 ORTHO05D005028 2.9e-06 55.8 63 46.0
Potri.001G253000 Populus trichocarpa HOM05D004149 ORTHO05D005028 2.9e-06 55.8 62 41.9
Zm00001eb351750 Zea mays HOM05D004149 ORTHO05D005028 2.9e-06 55.8 62 40.3
CiPaw.09G210500 Carya illinoinensis HOM05D004149 ORTHO05D005028 3.7e-06 55.5 62 40.3
Manes.01G160400 Manihot esculenta HOM05D004149 ORTHO05D005028 3.7e-06 55.5 63 46.0
RcHm_v2.0_Chr3g0462841 Rosa chinensis HOM05D004149 ORTHO05D005028 3.7e-06 55.5 102 35.3
MD12G1168700 Malus domestica HOM05D004149 ORTHO05D005028 4.9e-06 55.1 63 42.9
Phvul.008G260400 Phaseolus vulgaris HOM05D004149 ORTHO05D005028 4.9e-06 55.1 63 42.9
arahy.Tifrunner.gnm1.ann1.JHY1NE Arachis hypogaea HOM05D004149 ORTHO05D005028 6.4e-06 54.7 62 40.3
COL.COLO4_19178 Corchorus olitorius HOM05D004149 ORTHO05D005028 6.4e-06 54.7 62 37.1
Psat2g057600 Pisum sativum HOM05D004149 ORTHO05D005028 6.4e-06 54.7 63 42.9
FAN05G2859 Fragaria x ananassa HOM05D004149 ORTHO05D005028 8.3e-06 54.3 63 41.3


User provided reference genes

Program Settings